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Search of human proteins with 113422123
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|113422123 PREDICTED: hypothetical protein [Homo sapiens]
(177 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169201810 PREDICTED: hypothetical protein [Homo sapiens] 367 e-102
gi|113422123 PREDICTED: hypothetical protein [Homo sapiens] 367 e-102
gi|113421705 PREDICTED: hypothetical protein [Homo sapiens] 367 e-102
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 43 1e-04
gi|169211906 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|169211049 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|8922867 hypothetical protein LOC55776 [Homo sapiens] 38 0.005
gi|239754797 PREDICTED: hypothetical protein [Homo sapiens] 37 0.007
gi|239743415 PREDICTED: hypothetical protein [Homo sapiens] 37 0.007
gi|194353970 alpha-2A-adrenergic receptor [Homo sapiens] 37 0.012
gi|239757331 PREDICTED: hypothetical protein [Homo sapiens] 36 0.015
gi|239751841 PREDICTED: hypothetical protein [Homo sapiens] 36 0.015
gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo ... 36 0.015
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 36 0.015
gi|239756197 PREDICTED: hypothetical protein [Homo sapiens] 36 0.020
gi|194272140 dendrin [Homo sapiens] 36 0.020
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 35 0.026
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 35 0.026
gi|61097912 nucleolar protein with MIF4G domain 1 [Homo sapiens] 35 0.026
gi|182765480 chromosome 6 open reading frame 186 [Homo sapiens] 35 0.034
gi|188536004 zinc finger protein 469 [Homo sapiens] 35 0.044
gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens] 34 0.058
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 34 0.058
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap... 34 0.058
gi|19924099 synapsin I isoform Ia [Homo sapiens] 34 0.076
gi|19924097 synapsin I isoform Ib [Homo sapiens] 34 0.076
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 34 0.076
gi|32996733 Ras association (RalGDS/AF-6) domain family 5 isofor... 33 0.099
gi|32996731 Ras association (RalGDS/AF-6) domain family 5 isofor... 33 0.099
gi|239745038 PREDICTED: hypothetical protein XP_002343338 [Homo ... 33 0.099
>gi|169201810 PREDICTED: hypothetical protein [Homo sapiens]
Length = 177
Score = 367 bits (943), Expect = e-102
Identities = 177/177 (100%), Positives = 177/177 (100%)
Query: 1 MFPYPHLPYRVEASAPLGTEFAGPAATPAFLPGRGARRTRDPLRFRLNEFRAERRESCVS 60
MFPYPHLPYRVEASAPLGTEFAGPAATPAFLPGRGARRTRDPLRFRLNEFRAERRESCVS
Sbjct: 1 MFPYPHLPYRVEASAPLGTEFAGPAATPAFLPGRGARRTRDPLRFRLNEFRAERRESCVS 60
Query: 61 RRAAGPSVPRSLASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRP 120
RRAAGPSVPRSLASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRP
Sbjct: 61 RRAAGPSVPRSLASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRP 120
Query: 121 RPQRWDCTYLRNVLFCMSPRRAGQGPRAAGLRAPACMCSPRQSVSRKCSEFSGHSSL 177
RPQRWDCTYLRNVLFCMSPRRAGQGPRAAGLRAPACMCSPRQSVSRKCSEFSGHSSL
Sbjct: 121 RPQRWDCTYLRNVLFCMSPRRAGQGPRAAGLRAPACMCSPRQSVSRKCSEFSGHSSL 177
>gi|113422123 PREDICTED: hypothetical protein [Homo sapiens]
Length = 177
Score = 367 bits (943), Expect = e-102
Identities = 177/177 (100%), Positives = 177/177 (100%)
Query: 1 MFPYPHLPYRVEASAPLGTEFAGPAATPAFLPGRGARRTRDPLRFRLNEFRAERRESCVS 60
MFPYPHLPYRVEASAPLGTEFAGPAATPAFLPGRGARRTRDPLRFRLNEFRAERRESCVS
Sbjct: 1 MFPYPHLPYRVEASAPLGTEFAGPAATPAFLPGRGARRTRDPLRFRLNEFRAERRESCVS 60
Query: 61 RRAAGPSVPRSLASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRP 120
RRAAGPSVPRSLASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRP
Sbjct: 61 RRAAGPSVPRSLASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRP 120
Query: 121 RPQRWDCTYLRNVLFCMSPRRAGQGPRAAGLRAPACMCSPRQSVSRKCSEFSGHSSL 177
RPQRWDCTYLRNVLFCMSPRRAGQGPRAAGLRAPACMCSPRQSVSRKCSEFSGHSSL
Sbjct: 121 RPQRWDCTYLRNVLFCMSPRRAGQGPRAAGLRAPACMCSPRQSVSRKCSEFSGHSSL 177
>gi|113421705 PREDICTED: hypothetical protein [Homo sapiens]
Length = 177
Score = 367 bits (943), Expect = e-102
Identities = 177/177 (100%), Positives = 177/177 (100%)
Query: 1 MFPYPHLPYRVEASAPLGTEFAGPAATPAFLPGRGARRTRDPLRFRLNEFRAERRESCVS 60
MFPYPHLPYRVEASAPLGTEFAGPAATPAFLPGRGARRTRDPLRFRLNEFRAERRESCVS
Sbjct: 1 MFPYPHLPYRVEASAPLGTEFAGPAATPAFLPGRGARRTRDPLRFRLNEFRAERRESCVS 60
Query: 61 RRAAGPSVPRSLASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRP 120
RRAAGPSVPRSLASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRP
Sbjct: 61 RRAAGPSVPRSLASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRP 120
Query: 121 RPQRWDCTYLRNVLFCMSPRRAGQGPRAAGLRAPACMCSPRQSVSRKCSEFSGHSSL 177
RPQRWDCTYLRNVLFCMSPRRAGQGPRAAGLRAPACMCSPRQSVSRKCSEFSGHSSL
Sbjct: 121 RPQRWDCTYLRNVLFCMSPRRAGQGPRAAGLRAPACMCSPRQSVSRKCSEFSGHSSL 177
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 43.1 bits (100), Expect = 1e-04
Identities = 39/110 (35%), Positives = 48/110 (43%), Gaps = 17/110 (15%)
Query: 22 AGPAATPAFLPGRG----ARRTRDPLRFRLNEFRAERRESCVSRRAAGP-SVP-RSLASP 75
AGPA P PGRG RR+ P R + ER + +AG SVP R L P
Sbjct: 98 AGPAGPPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAASSAGTRSVPARRLPPP 157
Query: 76 GG---LAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRPRP 122
G L G + R P +A P P++ + R A P PG PRP
Sbjct: 158 CGGTSLGAGSRALRRPGSAALPRSPSSSR--------RWAAMPGPGAPRP 199
>gi|169211906 PREDICTED: hypothetical protein [Homo sapiens]
Length = 210
Score = 39.3 bits (90), Expect = 0.002
Identities = 38/121 (31%), Positives = 48/121 (39%), Gaps = 27/121 (22%)
Query: 13 ASAPLGTEFAGPAATPAFLPGRGARRTRDPLRFRLNEFRAERRESCVSR----------- 61
++AP G + GP + P GA + L + R RR CVSR
Sbjct: 55 STAPRGAQ--GPRSRPPL----GADTSAPDLSRTSSRCRRRRRRGCVSRLGSEGGRRPAR 108
Query: 62 ------RAAGPSVPRSLASPGGLAQGQESQRGPTESARPGQPAAEQL-REQASGIREAQR 114
R A P VP + P G+ +Q GP R QPAA QL E+ G AQ
Sbjct: 109 HRPTWPRRAEPQVPEECSLPAGVLP---AQHGPEPRPRGLQPAAHQLPGERGRGSTAAQH 165
Query: 115 P 115
P
Sbjct: 166 P 166
>gi|169211049 PREDICTED: hypothetical protein [Homo sapiens]
Length = 210
Score = 39.3 bits (90), Expect = 0.002
Identities = 38/121 (31%), Positives = 48/121 (39%), Gaps = 27/121 (22%)
Query: 13 ASAPLGTEFAGPAATPAFLPGRGARRTRDPLRFRLNEFRAERRESCVSR----------- 61
++AP G + GP + P GA + L + R RR CVSR
Sbjct: 55 STAPRGAQ--GPRSRPPL----GADTSAPDLSRTSSRCRRRRRRGCVSRLGSEGGRRPAR 108
Query: 62 ------RAAGPSVPRSLASPGGLAQGQESQRGPTESARPGQPAAEQL-REQASGIREAQR 114
R A P VP + P G+ +Q GP R QPAA QL E+ G AQ
Sbjct: 109 HRPTWPRRAEPQVPEECSLPAGVLP---AQHGPEPRPRGLQPAAHQLPGERGRGSTAAQH 165
Query: 115 P 115
P
Sbjct: 166 P 166
>gi|8922867 hypothetical protein LOC55776 [Homo sapiens]
Length = 183
Score = 37.7 bits (86), Expect = 0.005
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 24/107 (22%)
Query: 46 RLNEFRAERRESCVSRRAAGPSVPRSLASPGGLAQGQESQRGPTESARPG--------QP 97
RL EFRA +R+ AG + AS G G++++ T A PG +P
Sbjct: 4 RLAEFRA-------ARKRAGLAAQPPAASQGAQTPGEKAEAAATLKAAPGWLKRFLVWKP 56
Query: 98 AAEQLREQASGIREAQRPPPGR---------PRPQRWDCTYLRNVLF 135
R Q ++EA +P P P WD ++L N+ F
Sbjct: 57 RPASARAQPGLVQEAAQPQGSTSETPWNTAIPLPSCWDQSFLTNITF 103
>gi|239754797 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 37.4 bits (85), Expect = 0.007
Identities = 38/112 (33%), Positives = 42/112 (37%), Gaps = 9/112 (8%)
Query: 13 ASAPLGTEFAGPAATPAFLPGRGARRTRDPLRFRLNEFRAERRESCVSRRAAGP--SVPR 70
ASAP A P + G R RF L E A R RR G S P
Sbjct: 62 ASAPRAVR---TGAAPEVVVQSGHRSHASKRRF-LEEGEAPARRLSERRRGGGKEESRPG 117
Query: 71 SLASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRPRP 122
+ A+PGG A RGP + PG P A R G PP R RP
Sbjct: 118 TAAAPGGRAGLYGGPRGPHHVSLPGLPTA---RAHRPGAWPELAPPRPRARP 166
>gi|239743415 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 37.4 bits (85), Expect = 0.007
Identities = 38/112 (33%), Positives = 42/112 (37%), Gaps = 9/112 (8%)
Query: 13 ASAPLGTEFAGPAATPAFLPGRGARRTRDPLRFRLNEFRAERRESCVSRRAAGP--SVPR 70
ASAP A P + G R RF L E A R RR G S P
Sbjct: 62 ASAPRAVR---TGAAPEVVVQSGHRSHASKRRF-LEEGEAPARRLSERRRGGGKEESRPG 117
Query: 71 SLASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRPRP 122
+ A+PGG A RGP + PG P A R G PP R RP
Sbjct: 118 TAAAPGGRAGLYGGPRGPHHVSLPGLPTA---RAHRPGAWPELAPPRPRARP 166
>gi|194353970 alpha-2A-adrenergic receptor [Homo sapiens]
Length = 465
Score = 36.6 bits (83), Expect = 0.012
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 17/108 (15%)
Query: 69 PRSLASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRPRPQRWDCT 128
P ++A+P G + + + GP SA PG AE L Q +G PG P P T
Sbjct: 251 PDAVAAPPGGTERRPNGLGPERSAGPGGAEAEPLPTQLNG-------APGEPAPAGPRDT 303
Query: 129 YLRNVLFCMS---------PRRAGQGPRAAGLRAPACMCSPRQSVSRK 167
++ S PRR +GPR G +A A P S+ R+
Sbjct: 304 DALDLEESSSSDHAERPPGPRRPERGPRGKG-KARASQVKPGDSLPRR 350
>gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 36.2 bits (82), Expect = 0.015
Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 10/111 (9%)
Query: 14 SAPLGTEFAGPAAT--PAFLP------GRGARRTRDPLRFRLNEFRAERRESCVSRR--A 63
S+PL P A+ P LP R R+R R R R RR S R +
Sbjct: 12 SSPLSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRRSRSRSRPFS 71
Query: 64 AGPSVPRSLASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQR 114
+GPS P +SPGG + G S + P P + LR ++ R R
Sbjct: 72 SGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLR 122
>gi|239751841 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 36.2 bits (82), Expect = 0.015
Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 10/111 (9%)
Query: 14 SAPLGTEFAGPAAT--PAFLP------GRGARRTRDPLRFRLNEFRAERRESCVSRR--A 63
S+PL P A+ P LP R R+R R R R RR S R +
Sbjct: 12 SSPLSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRRSRSRSRPFS 71
Query: 64 AGPSVPRSLASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQR 114
+GPS P +SPGG + G S + P P + LR ++ R R
Sbjct: 72 SGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLR 122
>gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo
sapiens]
Length = 231
Score = 36.2 bits (82), Expect = 0.015
Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 10/111 (9%)
Query: 14 SAPLGTEFAGPAAT--PAFLP------GRGARRTRDPLRFRLNEFRAERRESCVSRR--A 63
S+PL P A+ P LP R R+R R R R RR S R +
Sbjct: 12 SSPLSWPPPPPRASSLPRSLPRSPRLCSRSRSRSRSRSRRRSRSLRWLRRRSRSRSRPFS 71
Query: 64 AGPSVPRSLASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQR 114
+GPS P +SPGG + G S + P P + LR ++ R R
Sbjct: 72 SGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSRLR 122
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 36.2 bits (82), Expect = 0.015
Identities = 34/128 (26%), Positives = 45/128 (35%), Gaps = 11/128 (8%)
Query: 3 PYPHLPYRVEASAPL----GTEFAGPAATPAFLPGRGARRTRDPLRFRLNEFRAERRESC 58
P P + + A+AP G E P + P+ GRG R R R R R S
Sbjct: 341 PSPRVRDKAAAAAPTPPARGKESPSPRSAPSS-QGRGGRAAGGAGRRRRRRRRRRRSRSS 399
Query: 59 VS------RRAAGPSVPRSLASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREA 112
S RR P+ PR + A+ + PG + G R
Sbjct: 400 ASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAK 459
Query: 113 QRPPPGRP 120
+RPP RP
Sbjct: 460 ERPPRARP 467
>gi|239756197 PREDICTED: hypothetical protein [Homo sapiens]
Length = 331
Score = 35.8 bits (81), Expect = 0.020
Identities = 41/140 (29%), Positives = 53/140 (37%), Gaps = 18/140 (12%)
Query: 42 PLRFRLNEFRAERRESCVSRRAAGPSVPRSLASPGGLAQGQESQRGPTESA--------- 92
P R + F+ R S +RR +G R L SPG Q GP E
Sbjct: 128 PPRAQSPGFQQPGRRS--ARRVSGIRAMR-LCSPGSQPGTQNLHPGPREYRTPVGTGIIP 184
Query: 93 RPGQPAAEQLREQASGIREAQRPPPGRPRPQRWDCTYL--RNVLFCMSPRRAGQGPRAAG 150
RPG E LRE + + E ++PP + W+ R C P PRA
Sbjct: 185 RPG--GTETLREACAALGEGRQPP--LVSAESWEAVGFERRPGELCAEPGGPDLLPRAFR 240
Query: 151 LRAPACMCSPRQSVSRKCSE 170
R P PR + +R C E
Sbjct: 241 SRCPGTRVCPRCAQTRLCRE 260
>gi|194272140 dendrin [Homo sapiens]
Length = 711
Score = 35.8 bits (81), Expect = 0.020
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 26/127 (20%)
Query: 39 TRDPLRFRLNEF-RAERRESCVSRRAAGPSVPRSLASPGGLAQGQESQRGPTESARPGQP 97
+R P+ F+ + + R + +C R + PR + L + + GP R +
Sbjct: 51 SRQPMDFQASHWARGFQNRTCGPRPGSPQPPPRRPWASRVLQEATNWRAGPLAEVRAREQ 110
Query: 98 ----AAEQLREQASGIRE------AQRPPPGRPRPQRWDCTYLRNVLFCMSPRRAGQGPR 147
AA Q RE R+ A+R PPGRPRP+ PR A + +
Sbjct: 111 EKRKAASQEREAKETERKRRKAGGARRSPPGRPRPE---------------PRNAPRVAQ 155
Query: 148 AAGLRAP 154
AGL AP
Sbjct: 156 LAGLPAP 162
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 35.4 bits (80), Expect = 0.026
Identities = 43/136 (31%), Positives = 50/136 (36%), Gaps = 17/136 (12%)
Query: 3 PYPHLPYRVEASAPLGTEFAGPAATPAFLPGRGAR--RTRDPLRFRLNEFRAERRESCVS 60
P LP R A G PA F GR R R LR R V
Sbjct: 99 PAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVR 158
Query: 61 RRAAGPSVPRS-LASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIR--------- 110
R AG PR A+P G GQ ++R +PG P LR G
Sbjct: 159 SRLAGLGAPRGGAAAPRGWG-GQGAERLGVH--QPGLPTHAALRGGGGGSEGGGGGARPS 215
Query: 111 --EAQRPPPGRPRPQR 124
A++PP GRPRP+R
Sbjct: 216 PPRARQPPSGRPRPRR 231
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 35.4 bits (80), Expect = 0.026
Identities = 43/136 (31%), Positives = 50/136 (36%), Gaps = 17/136 (12%)
Query: 3 PYPHLPYRVEASAPLGTEFAGPAATPAFLPGRGAR--RTRDPLRFRLNEFRAERRESCVS 60
P LP R A G PA F GR R R LR R V
Sbjct: 99 PAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKRRGWGLRPQRVR 158
Query: 61 RRAAGPSVPRS-LASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIR--------- 110
R AG PR A+P G GQ ++R +PG P LR G
Sbjct: 159 SRLAGLGAPRGGAAAPRGWG-GQGAERLGVH--QPGLPTHAALRGGGGGSEGGGGGARPS 215
Query: 111 --EAQRPPPGRPRPQR 124
A++PP GRPRP+R
Sbjct: 216 PPRARQPPSGRPRPRR 231
>gi|61097912 nucleolar protein with MIF4G domain 1 [Homo sapiens]
Length = 860
Score = 35.4 bits (80), Expect = 0.026
Identities = 34/113 (30%), Positives = 44/113 (38%), Gaps = 22/113 (19%)
Query: 12 EASAPLGTEFAGPAATPAFLPGRGARRTRDPLRFRLNEFRAERRESCVSRRAAGPSVPRS 71
E AP G E G A +F PG R++R LR R RR +R AGP
Sbjct: 58 EGEAPGGCE--GRGAPVSFRPG--GRKSRKELRKEKRHLRKARR----LQRTAGPEQGPG 109
Query: 72 LASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRPRPQR 124
L G + ++ E ARP P+ + PP +PRP R
Sbjct: 110 LGGRSGAEEASGHRQDTEERARPA-PSRDP-------------SPPRKPRPSR 148
>gi|182765480 chromosome 6 open reading frame 186 [Homo sapiens]
Length = 366
Score = 35.0 bits (79), Expect = 0.034
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 58 CVSRRAAGPSVPRSLASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPP 117
C R AGP P A PG + GP PGQP R Q + +R +R PP
Sbjct: 30 CAELRRAGPGSPTRSAPPGPAWR----PPGPHLPPAPGQPRGAS-RRQVTYVRSGRRAPP 84
Query: 118 G 118
G
Sbjct: 85 G 85
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 34.7 bits (78), Expect = 0.044
Identities = 42/181 (23%), Positives = 64/181 (35%), Gaps = 26/181 (14%)
Query: 9 YRVEASAPLGTEFAGPAATPAFLPGRGARRTRDPLRFRLNEFRAERRESCVS-------- 60
+ V P GT G A PA R+ + +F R++ S
Sbjct: 3626 HMVSEGGPRGTFHKGSATKPAGCQSSSKDRSAASTPSKALKFPVHPRKAVGSLAPGELAR 3685
Query: 61 --RRAAGPSVPRSLASPGGLAQGQESQRGPTESARPGQP--AAEQLREQASGIREAQRPP 116
P+ P+ A PG +QG S R T++ QP A+ QL+ + + P
Sbjct: 3686 GTENGMKPATPK--AKPGPSSQGSGSPRPGTKTGGGSQPQPASGQLQSETATTPAKPSFP 3743
Query: 117 PGRPRPQRWDCTYLRNVLFCMSPRRAGQGPRAAGLRAPACMCSPRQ----SVSRKCSEFS 172
P P+R + +GPR AG + P P++ S RK +
Sbjct: 3744 SRSPAPERLPAR--------AQAKSCTKGPREAGEQGPHGSLGPKEKGESSTKRKKGQVP 3795
Query: 173 G 173
G
Sbjct: 3796 G 3796
>gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens]
Length = 1586
Score = 34.3 bits (77), Expect = 0.058
Identities = 34/103 (33%), Positives = 43/103 (41%), Gaps = 16/103 (15%)
Query: 3 PYPHLPYRVEASAPLGTEFAGPA-ATPAFLPGRGARRTRDPLRF-------RLNEFRAER 54
P P P R G AG A A P PG GARR DP+R R+ F +
Sbjct: 932 PRPLGPRRGSDGPTYGHGHAGAAPAFPHEAPGGGARRASDPVRRPDALSLPRVQRFHSTH 991
Query: 55 RES------CVSRRAAGPSVPRSLASPGGLAQGQESQRGPTES 91
+ C RR G + ++ GGLA+G S R P+ S
Sbjct: 992 NVNPGPLPPCADRR--GLRLQSHPSTDGGLARGAYSPRPPSIS 1032
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 34.3 bits (77), Expect = 0.058
Identities = 42/136 (30%), Positives = 50/136 (36%), Gaps = 17/136 (12%)
Query: 3 PYPHLPYRVEASAPLGTEFAGPAATPAFLPGRGAR--RTRDPLRFRLNEFRAERRESCVS 60
P LP R A G PA F GR R R +R R V
Sbjct: 99 PAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGAVRGSGKRRGWGLRPQRVR 158
Query: 61 RRAAGPSVPRS-LASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIR--------- 110
R AG PR A+P G GQ ++R +PG P LR G
Sbjct: 159 SRLAGLGAPRGGAAAPRGWG-GQGAERLGVH--QPGLPTHAALRGGGGGSEGGGGGARPS 215
Query: 111 --EAQRPPPGRPRPQR 124
A++PP GRPRP+R
Sbjct: 216 PPRARQPPSGRPRPRR 231
>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sapiens]
Length = 1747
Score = 34.3 bits (77), Expect = 0.058
Identities = 33/106 (31%), Positives = 44/106 (41%), Gaps = 9/106 (8%)
Query: 23 GPAATPAFLPGRGARRTRDPLRFRLNEFRAERRESCVSRRAAGPSV-PRSLASPGGL--- 78
G A+PAF P R P R + E R+S +++ SV SL P GL
Sbjct: 1170 GSLASPAFSP-RSPAWIPVPARREAEKVPREERKSPEDKKSMILSVLDTSLQRPAGLIVV 1228
Query: 79 ---AQGQESQR-GPTESARPGQPAAEQLREQASGIREAQRPPPGRP 120
+ GQE R G E RPG P Q++ + E P +P
Sbjct: 1229 HATSNGQEPSRLGGAEEERPGTPELAPAPMQSAAVAEPLPSPRAQP 1274
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 33.9 bits (76), Expect = 0.076
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 16/107 (14%)
Query: 23 GPAATPAFLPGRGARRTRDPLRFRLNEFRAERRESCVSRRAAGPSVPRSLASPGGLAQGQ 82
GP A PA AR P R R++ VS GP+ P++ +P G Q Q
Sbjct: 539 GPGAPPA------ARPPASPSPQRQAGPPQATRQTSVS----GPAPPKASGAPPGGQQRQ 588
Query: 83 ESQRGPTESARPGQPAAEQLREQASGIREAQRP------PPGRPRPQ 123
+ P A P + A++ +G Q+P P GRP+PQ
Sbjct: 589 GPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQ 635
Score = 27.7 bits (60), Expect = 5.4
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 16/110 (14%)
Query: 73 ASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRPRPQRWDCTYLRN 132
ASPG + GQ G P Q +Q +G QRPPP PQ +
Sbjct: 426 ASPGRGSHGQTPSPGAL-------PLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQG 478
Query: 133 VLFCMSPRRAGQ------GPRAAG---LRAPACMCSPRQSVSRKCSEFSG 173
P GQ GP A R P+ +P+Q S+ G
Sbjct: 479 PPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQG 528
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 33.9 bits (76), Expect = 0.076
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 16/107 (14%)
Query: 23 GPAATPAFLPGRGARRTRDPLRFRLNEFRAERRESCVSRRAAGPSVPRSLASPGGLAQGQ 82
GP A PA AR P R R++ VS GP+ P++ +P G Q Q
Sbjct: 539 GPGAPPA------ARPPASPSPQRQAGPPQATRQTSVS----GPAPPKASGAPPGGQQRQ 588
Query: 83 ESQRGPTESARPGQPAAEQLREQASGIREAQRP------PPGRPRPQ 123
+ P A P + A++ +G Q+P P GRP+PQ
Sbjct: 589 GPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQ 635
Score = 27.7 bits (60), Expect = 5.4
Identities = 30/110 (27%), Positives = 38/110 (34%), Gaps = 16/110 (14%)
Query: 73 ASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRPRPQRWDCTYLRN 132
ASPG + GQ G P Q +Q +G QRPPP PQ +
Sbjct: 426 ASPGRGSHGQTPSPGAL-------PLGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQG 478
Query: 133 VLFCMSPRRAGQ------GPRAAG---LRAPACMCSPRQSVSRKCSEFSG 173
P GQ GP A R P+ +P+Q S+ G
Sbjct: 479 PPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQG 528
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 33.9 bits (76), Expect = 0.076
Identities = 44/133 (33%), Positives = 54/133 (40%), Gaps = 34/133 (25%)
Query: 7 LPYRVEASAPLGTEFAGP---AATPAFLPGRGARRTRDPLRFRLNEFRAERRESCVSRRA 63
LP ASAP EF P AA P + PGRG P + A
Sbjct: 749 LPMAPPASAP--PEFLDPLMGAAAPQY-PGRGPPPAPPP---------PPPPPRAPADPA 796
Query: 64 AGPSVPRSLASPG-GLA--------QGQESQRG-PTESARPGQPAAEQLREQASGIREAQ 113
A P P ++ASPG GL+ G E++ E A PG AAE+ G+ +
Sbjct: 797 ASPDPPSAVASPGSGLSSPGPKPGDSGYETETPFSPEGAFPGGGAAEE-----EGVPRPR 851
Query: 114 RPP----PGRPRP 122
PP PG PRP
Sbjct: 852 APPEPPDPGAPRP 864
>gi|32996733 Ras association (RalGDS/AF-6) domain family 5 isoform B
[Homo sapiens]
Length = 336
Score = 33.5 bits (75), Expect = 0.099
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 62 RAAGPSVPRSLASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRPR 121
R++ VP L++ G +G+ ++R + P A+ R G+++ R PG PR
Sbjct: 40 RSSRLCVPAPLSTAPGAREGRSARRAARGNLEPPPRASRPARPLRPGLQQRLRRRPGAPR 99
Query: 122 PQ 123
P+
Sbjct: 100 PR 101
>gi|32996731 Ras association (RalGDS/AF-6) domain family 5 isoform A
[Homo sapiens]
Length = 418
Score = 33.5 bits (75), Expect = 0.099
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 62 RAAGPSVPRSLASPGGLAQGQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRPR 121
R++ VP L++ G +G+ ++R + P A+ R G+++ R PG PR
Sbjct: 40 RSSRLCVPAPLSTAPGAREGRSARRAARGNLEPPPRASRPARPLRPGLQQRLRRRPGAPR 99
Query: 122 PQ 123
P+
Sbjct: 100 PR 101
>gi|239745038 PREDICTED: hypothetical protein XP_002343338 [Homo
sapiens]
Length = 244
Score = 33.5 bits (75), Expect = 0.099
Identities = 41/148 (27%), Positives = 52/148 (35%), Gaps = 25/148 (16%)
Query: 28 PAFLPG----RGARRTRDPLRFRLNEFRAER-RESC--VSRRAAGPSVPRSLASPGGLAQ 80
P +PG R R RD L +R R SC SR P++PR ASP
Sbjct: 43 PPRIPGPPTTRQPPRVRDHLHLSCPRASQDRPRPSCPLASRDRRRPAIPR--ASP----- 95
Query: 81 GQESQRGPTESARPGQPAAEQLREQASGIREAQRPPPGRPRPQRWDCTYLRNVLFCMS-- 138
+ P A PG P + Q + P P +R R + C +
Sbjct: 96 ---DRPRPISPAPPGPPTSRQSPRISVAAAPVLPAAPRPPTQRRCVPVAQRGLPLCGTGL 152
Query: 139 ------PRRAGQGPRAAGLRAPACMCSP 160
P R+ G AA R P C C P
Sbjct: 153 GLETRRPARSCLGETAAPFRFPRCECKP 180
Score = 28.1 bits (61), Expect = 4.2
Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 23/88 (26%)
Query: 86 RGPTESARPGQPAAEQLREQASGIREAQRPPPGRPRPQRWDCTYLRNVLFCMSPRRAG-- 143
R + RP P A + R + + R P RPRP +SP G
Sbjct: 68 RASQDRPRPSCPLASRDRRRPA----IPRASPDRPRP--------------ISPAPPGPP 109
Query: 144 ---QGPRAAGLRAPACMCSPRQSVSRKC 168
Q PR + AP +PR R+C
Sbjct: 110 TSRQSPRISVAAAPVLPAAPRPPTQRRC 137
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,208,872
Number of Sequences: 37866
Number of extensions: 528844
Number of successful extensions: 3415
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 348
Number of HSP's that attempted gapping in prelim test: 3106
Number of HSP's gapped (non-prelim): 649
length of query: 177
length of database: 18,247,518
effective HSP length: 95
effective length of query: 82
effective length of database: 14,650,248
effective search space: 1201320336
effective search space used: 1201320336
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.