BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo sapiens] (208 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho... 434 e-122 gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho... 434 e-122 gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho... 431 e-121 gi|71143137 high-mobility group box 3 [Homo sapiens] 365 e-101 gi|169212060 PREDICTED: high mobility group protein B3-like prot... 324 4e-89 gi|239745831 PREDICTED: high mobility group protein B3-like prot... 324 4e-89 gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens] 308 3e-84 gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens] 308 3e-84 gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo sap... 308 3e-84 gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho... 303 7e-83 gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho... 303 7e-83 gi|113416897 PREDICTED: similar to high mobility group box 3 iso... 303 7e-83 gi|4504425 high-mobility group box 1 [Homo sapiens] 283 6e-77 gi|194688135 high-mobility group box 2 [Homo sapiens] 275 2e-74 gi|194688133 high-mobility group box 2 [Homo sapiens] 275 2e-74 gi|11321591 high-mobility group box 2 [Homo sapiens] 275 2e-74 gi|56806673 high-mobility group box 1-like 1 [Homo sapiens] 268 2e-72 gi|239742753 PREDICTED: similar to high mobility group box 3 iso... 248 3e-66 gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens] 217 5e-57 gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens] 212 2e-55 gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens] 212 2e-55 gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens] 209 1e-54 gi|57232750 HMG2 like isoform 1 [Homo sapiens] 125 3e-29 gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens] 123 1e-28 gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens] 123 1e-28 gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens] 108 3e-24 gi|4507241 structure specific recognition protein 1 [Homo sapiens] 80 9e-16 gi|57232748 HMG2 like isoform 2 [Homo sapiens] 75 4e-14 gi|169165476 PREDICTED: similar to high-mobility group box 2 [Ho... 68 5e-12 gi|239748075 PREDICTED: similar to high-mobility group box 2 [Ho... 68 5e-12 >gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo sapiens] Length = 208 Score = 434 bits (1117), Expect = e-122 Identities = 208/208 (100%), Positives = 208/208 (100%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF Sbjct: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 Query: 61 GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120 GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG Sbjct: 61 GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120 Query: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE Sbjct: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180 Query: 181 EEDEEDEEEEEKEKDEEDEQRNCLSVSL 208 EEDEEDEEEEEKEKDEEDEQRNCLSVSL Sbjct: 181 EEDEEDEEEEEKEKDEEDEQRNCLSVSL 208 >gi|113420668 PREDICTED: similar to high mobility group box 3 [Homo sapiens] Length = 208 Score = 434 bits (1117), Expect = e-122 Identities = 208/208 (100%), Positives = 208/208 (100%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF Sbjct: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 Query: 61 GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120 GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG Sbjct: 61 GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120 Query: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE Sbjct: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180 Query: 181 EEDEEDEEEEEKEKDEEDEQRNCLSVSL 208 EEDEEDEEEEEKEKDEEDEQRNCLSVSL Sbjct: 181 EEDEEDEEEEEKEKDEEDEQRNCLSVSL 208 >gi|169184027 PREDICTED: similar to high mobility group box 3 [Homo sapiens] Length = 208 Score = 431 bits (1107), Expect = e-121 Identities = 207/208 (99%), Positives = 207/208 (99%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEV VNFAEFSKKCSGRWKTMSSKEKFKF Sbjct: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60 Query: 61 GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120 GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG Sbjct: 61 GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120 Query: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE Sbjct: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180 Query: 181 EEDEEDEEEEEKEKDEEDEQRNCLSVSL 208 EEDEEDEEEEEKEKDEEDEQRNCLSVSL Sbjct: 181 EEDEEDEEEEEKEKDEEDEQRNCLSVSL 208 >gi|71143137 high-mobility group box 3 [Homo sapiens] Length = 200 Score = 365 bits (936), Expect = e-101 Identities = 179/200 (89%), Positives = 187/200 (93%), Gaps = 1/200 (0%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 MAKGDPKKP+GKMSAYAF VQTC +EHKKKNPEVPVNFAEFSKKCS RWKTMS KEK KF Sbjct: 1 MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60 Query: 61 GEMAKADEVCYDREMKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 119 EMAKAD+V YDREMKDYGPAKGGKKK DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI Sbjct: 61 DEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 120 Query: 120 GDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKV 179 GDVAKKLGEMWNNLNDSEKQPY+TKAAKLKEKYEKDV D K KGKF GAK PAKVARKKV Sbjct: 121 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKV 180 Query: 180 EEEDEEDEEEEEKEKDEEDE 199 EEEDEE+EEEEE+E++EEDE Sbjct: 181 EEEDEEEEEEEEEEEEEEDE 200 >gi|169212060 PREDICTED: high mobility group protein B3-like protein-like [Homo sapiens] Length = 207 Score = 324 bits (830), Expect = 4e-89 Identities = 156/187 (83%), Positives = 169/187 (90%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 MAKGDPKKP+GKMSAYAF VQTC +EHKKKNP+VP+NFAEFSKKCS RWKTMS KEK KF Sbjct: 1 MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60 Query: 61 GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120 E+AKAD+V YD+E+KDYGPAKGGKKKDPNAPKRPPSGFFLFCSEF PK KSTNPGI IG Sbjct: 61 NELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIG 120 Query: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180 DVAKKLGEMW NLNDSEKQPY+T+AAKLKEKYEKDV K KGK GAK PAKVA+KKVE Sbjct: 121 DVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVE 180 Query: 181 EEDEEDE 187 EEDE++E Sbjct: 181 EEDEDEE 187 >gi|239745831 PREDICTED: high mobility group protein B3-like protein-like [Homo sapiens] Length = 207 Score = 324 bits (830), Expect = 4e-89 Identities = 156/187 (83%), Positives = 169/187 (90%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 MAKGDPKKP+GKMSAYAF VQTC +EHKKKNP+VP+NFAEFSKKCS RWKTMS KEK KF Sbjct: 1 MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60 Query: 61 GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120 E+AKAD+V YD+E+KDYGPAKGGKKKDPNAPKRPPSGFFLFCSEF PK KSTNPGI IG Sbjct: 61 NELAKADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPIG 120 Query: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180 DVAKKLGEMW NLNDSEKQPY+T+AAKLKEKYEKDV K KGK GAK PAKVA+KKVE Sbjct: 121 DVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKVE 180 Query: 181 EEDEEDE 187 EEDE++E Sbjct: 181 EEDEDEE 187 >gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens] Length = 201 Score = 308 bits (788), Expect = 3e-84 Identities = 150/199 (75%), Positives = 170/199 (85%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 MA+GD KKP+GKMSAYAF QTC +EHKKKNPEVPVNF EFSKKCS + KTMS KEK KF Sbjct: 1 MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60 Query: 61 GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120 EMAK D+V YD+EMKD GP +GGKKKDPNA KRP SGFFLFCSEF PKIKSTNPGISIG Sbjct: 61 DEMAKVDKVHYDQEMKDNGPVEGGKKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGISIG 120 Query: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180 D+AKKLGEMW N +D EKQPY+TKAA LKEKYEKDV D K KGKF AK P K+A KKV+ Sbjct: 121 DMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKVK 180 Query: 181 EEDEEDEEEEEKEKDEEDE 199 E+D+EDEEEEE+E+++++E Sbjct: 181 EKDKEDEEEEEEEEEKKEE 199 >gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens] Length = 201 Score = 308 bits (788), Expect = 3e-84 Identities = 150/199 (75%), Positives = 170/199 (85%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 MA+GD KKP+GKMSAYAF QTC +EHKKKNPEVPVNF EFSKKCS + KTMS KEK KF Sbjct: 1 MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60 Query: 61 GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120 EMAK D+V YD+EMKD GP +GGKKKDPNA KRP SGFFLFCSEF PKIKSTNPGISIG Sbjct: 61 DEMAKVDKVHYDQEMKDNGPVEGGKKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGISIG 120 Query: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180 D+AKKLGEMW N +D EKQPY+TKAA LKEKYEKDV D K KGKF AK P K+A KKV+ Sbjct: 121 DMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKVK 180 Query: 181 EEDEEDEEEEEKEKDEEDE 199 E+D+EDEEEEE+E+++++E Sbjct: 181 EKDKEDEEEEEEEEEKKEE 199 >gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo sapiens] Length = 201 Score = 308 bits (788), Expect = 3e-84 Identities = 150/199 (75%), Positives = 170/199 (85%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 MA+GD KKP+GKMSAYAF QTC +EHKKKNPEVPVNF EFSKKCS + KTMS KEK KF Sbjct: 1 MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60 Query: 61 GEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIG 120 EMAK D+V YD+EMKD GP +GGKKKDPNA KRP SGFFLFCSEF PKIKSTNPGISIG Sbjct: 61 DEMAKVDKVHYDQEMKDNGPVEGGKKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGISIG 120 Query: 121 DVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVE 180 D+AKKLGEMW N +D EKQPY+TKAA LKEKYEKDV D K KGKF AK P K+A KKV+ Sbjct: 121 DMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKVK 180 Query: 181 EEDEEDEEEEEKEKDEEDE 199 E+D+EDEEEEE+E+++++E Sbjct: 181 EKDKEDEEEEEEEEEKKEE 199 >gi|169168462 PREDICTED: similar to high mobility group box 3 [Homo sapiens] Length = 204 Score = 303 bits (776), Expect = 7e-83 Identities = 156/189 (82%), Positives = 164/189 (86%), Gaps = 6/189 (3%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 MAKGDPKKP+GKMSAY F VQTC +E KKKNP VNFAEFSKKCS RWKTMS KEK KF Sbjct: 1 MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57 Query: 61 GEMAKADEVCYDREMKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 119 EMAK D+V DREMK GPAKGGKKK DP+APKRPPSGFFLF SE RPKIKSTNPGISI Sbjct: 58 DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115 Query: 120 GDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKV 179 GDVAKKLGEMWNNLNDSEKQPY+TK AKLKEKYEKDV D K KGKF G+KRPAKVA KKV Sbjct: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175 Query: 180 EEEDEEDEE 188 EEEDE++EE Sbjct: 176 EEEDEDEEE 184 >gi|169168166 PREDICTED: similar to high mobility group box 3 [Homo sapiens] Length = 204 Score = 303 bits (776), Expect = 7e-83 Identities = 156/189 (82%), Positives = 164/189 (86%), Gaps = 6/189 (3%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 MAKGDPKKP+GKMSAY F VQTC +E KKKNP VNFAEFSKKCS RWKTMS KEK KF Sbjct: 1 MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57 Query: 61 GEMAKADEVCYDREMKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 119 EMAK D+V DREMK GPAKGGKKK DP+APKRPPSGFFLF SE RPKIKSTNPGISI Sbjct: 58 DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115 Query: 120 GDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKV 179 GDVAKKLGEMWNNLNDSEKQPY+TK AKLKEKYEKDV D K KGKF G+KRPAKVA KKV Sbjct: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175 Query: 180 EEEDEEDEE 188 EEEDE++EE Sbjct: 176 EEEDEDEEE 184 >gi|113416897 PREDICTED: similar to high mobility group box 3 isoform 1 [Homo sapiens] Length = 201 Score = 303 bits (776), Expect = 7e-83 Identities = 156/189 (82%), Positives = 164/189 (86%), Gaps = 6/189 (3%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 MAKGDPKKP+GKMSAY F VQTC +E KKKNP VNFAEFSKKCS RWKTMS KEK KF Sbjct: 1 MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57 Query: 61 GEMAKADEVCYDREMKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 119 EMAK D+V DREMK GPAKGGKKK DP+APKRPPSGFFLF SE RPKIKSTNPGISI Sbjct: 58 DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115 Query: 120 GDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKV 179 GDVAKKLGEMWNNLNDSEKQPY+TK AKLKEKYEKDV D K KGKF G+KRPAKVA KKV Sbjct: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175 Query: 180 EEEDEEDEE 188 EEEDE++EE Sbjct: 176 EEEDEDEEE 184 >gi|4504425 high-mobility group box 1 [Homo sapiens] Length = 215 Score = 283 bits (725), Expect = 6e-77 Identities = 142/206 (68%), Positives = 163/206 (79%), Gaps = 7/206 (3%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 M KGDPKKP+GKMS+YAF VQTC +EHKKK+P+ VNF+EFSKKCS RWKTMS+KEK KF Sbjct: 1 MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60 Query: 61 GEMAKADEVCYDREMKDYGPAKGGKKK---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 117 +MAKAD+ Y+REMK Y P KG KK DPNAPKRPPS FFLFCSE+RPKIK +PG+ Sbjct: 61 EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 120 Query: 118 SIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAK----RPAK 173 SIGDVAKKLGEMWNN +KQPY KAAKLKEKYEKD+ + KGK AK + K Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK 180 Query: 174 VARKKVEEEDEEDEEEEEKEKDEEDE 199 +KK EEEDEEDEE+EE+E+DEEDE Sbjct: 181 SKKKKEEEEDEEDEEDEEEEEDEEDE 206 >gi|194688135 high-mobility group box 2 [Homo sapiens] Length = 209 Score = 275 bits (704), Expect = 2e-74 Identities = 138/206 (66%), Positives = 163/206 (79%), Gaps = 6/206 (2%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 M KGDP KP+GKMS+YAF VQTC +EHKKK+P+ VNFAEFSKKCS RWKTMS+KEK KF Sbjct: 1 MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60 Query: 61 GEMAKADEVCYDREMKDYGPAKG---GKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 117 +MAK+D+ YDREMK+Y P KG GKKKDPNAPKRPPS FFLFCSE RPKIKS +PG+ Sbjct: 61 EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120 Query: 118 SIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKF-YGAKRPAKV-- 174 SIGD AKKLGEMW+ + +KQPY KAAKLKEKYEKD+ + KGK G K P + Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180 Query: 175 ARKKVEEEDEEDEEEEEKEKDEEDEQ 200 ++KK E EDEE+EEEEE E +EE+++ Sbjct: 181 SKKKNEPEDEEEEEEEEDEDEEEEDE 206 >gi|194688133 high-mobility group box 2 [Homo sapiens] Length = 209 Score = 275 bits (704), Expect = 2e-74 Identities = 138/206 (66%), Positives = 163/206 (79%), Gaps = 6/206 (2%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 M KGDP KP+GKMS+YAF VQTC +EHKKK+P+ VNFAEFSKKCS RWKTMS+KEK KF Sbjct: 1 MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60 Query: 61 GEMAKADEVCYDREMKDYGPAKG---GKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 117 +MAK+D+ YDREMK+Y P KG GKKKDPNAPKRPPS FFLFCSE RPKIKS +PG+ Sbjct: 61 EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120 Query: 118 SIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKF-YGAKRPAKV-- 174 SIGD AKKLGEMW+ + +KQPY KAAKLKEKYEKD+ + KGK G K P + Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180 Query: 175 ARKKVEEEDEEDEEEEEKEKDEEDEQ 200 ++KK E EDEE+EEEEE E +EE+++ Sbjct: 181 SKKKNEPEDEEEEEEEEDEDEEEEDE 206 >gi|11321591 high-mobility group box 2 [Homo sapiens] Length = 209 Score = 275 bits (704), Expect = 2e-74 Identities = 138/206 (66%), Positives = 163/206 (79%), Gaps = 6/206 (2%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 M KGDP KP+GKMS+YAF VQTC +EHKKK+P+ VNFAEFSKKCS RWKTMS+KEK KF Sbjct: 1 MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60 Query: 61 GEMAKADEVCYDREMKDYGPAKG---GKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 117 +MAK+D+ YDREMK+Y P KG GKKKDPNAPKRPPS FFLFCSE RPKIKS +PG+ Sbjct: 61 EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120 Query: 118 SIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKF-YGAKRPAKV-- 174 SIGD AKKLGEMW+ + +KQPY KAAKLKEKYEKD+ + KGK G K P + Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180 Query: 175 ARKKVEEEDEEDEEEEEKEKDEEDEQ 200 ++KK E EDEE+EEEEE E +EE+++ Sbjct: 181 SKKKNEPEDEEEEEEEEDEDEEEEDE 206 >gi|56806673 high-mobility group box 1-like 1 [Homo sapiens] Length = 211 Score = 268 bits (686), Expect = 2e-72 Identities = 133/206 (64%), Positives = 162/206 (78%), Gaps = 6/206 (2%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 M KGDPKKP+GKMS+YAF VQTC +EHKKK+ + VNF+EFS KCS RWKTMS+KEK KF Sbjct: 1 MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60 Query: 61 GEMAKADEVCYDREMKDYGPAKGGKKK---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 117 +MAKAD+ Y+R+MK Y P KG KK DPNAPKRPPS FFLFCSE+ PKIK +PG+ Sbjct: 61 EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120 Query: 118 SIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKR---PAKV 174 SIGDVAKKLGEMWNN +KQP KAAKLKEKYEKD+ + KGK AK+ A+ Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180 Query: 175 ARKKVEEEDEEDEEEEEKEKDEEDEQ 200 ++KK EEE++E++EE+E+E+DEEDE+ Sbjct: 181 SKKKKEEEEDEEDEEDEEEEDEEDEE 206 >gi|239742753 PREDICTED: similar to high mobility group box 3 isoform 2 [Homo sapiens] Length = 183 Score = 248 bits (633), Expect = 3e-66 Identities = 126/150 (84%), Positives = 132/150 (88%), Gaps = 3/150 (2%) Query: 40 EFSKKCSGRWKTMSSKEKFKFGEMAKADEVCYDREMKDYGPAKGGKKK-DPNAPKRPPSG 98 EFSKKCS RWKTMS KEK KF EMAK D+V DREMK GPAKGGKKK DP+APKRPPSG Sbjct: 19 EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSG 76 Query: 99 FFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVD 158 FFLF SE RPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY+TK AKLKEKYEKDV D Sbjct: 77 FFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVAD 136 Query: 159 CKLKGKFYGAKRPAKVARKKVEEEDEEDEE 188 K KGKF G+KRPAKVA KKVEEEDE++EE Sbjct: 137 SKSKGKFDGSKRPAKVAWKKVEEEDEDEEE 166 >gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens] Length = 879 Score = 217 bits (553), Expect = 5e-57 Identities = 108/182 (59%), Positives = 135/182 (74%), Gaps = 4/182 (2%) Query: 24 CKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKFGEMAKADEVCYDREMKDYGPAKG 83 C+EHKKKNP+ V F+EF KKCS WKT+ +KEK KF +MAKAD+ Y+REMK Y P KG Sbjct: 698 CEEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKG 757 Query: 84 GKKK---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQP 140 KKK DPNAPKRPP FFLFCSE+RPKIK +PG+SI DV KKL MWNN ++KQ Sbjct: 758 EKKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQF 817 Query: 141 YVTKAAKLKEKYEKDVVDCKLKGKFYGAK-RPAKVARKKVEEEDEEDEEEEEKEKDEEDE 199 Y KAAKLKEKY+KD+ + KGK AK R K + K ++E+EEDEE+E++E++EED+ Sbjct: 818 YEKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEEDD 877 Query: 200 QR 201 + Sbjct: 878 DK 879 >gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens] Length = 488 Score = 212 bits (540), Expect = 2e-55 Identities = 112/180 (62%), Positives = 129/180 (71%), Gaps = 14/180 (7%) Query: 34 VPVNFAEFSKKCSGRWKTMSSKEKFKFG-------EMAKADEVCYDREMKDYGPAKGGKK 86 V VNF+EFSKKCS RWK MS+KEK KFG +MAKAD+ Y REMK Y P KG K Sbjct: 163 VSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETK 222 Query: 87 K---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVT 143 K DPNAPKRPPS FFL+ SE+ PKIK PG+S GDVAKKLGEMWNN +KQPY Sbjct: 223 KKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEK 282 Query: 144 KAAKLKEKYEKDVVDCKLKGKF----YGAKRPAKVARKKVEEEDEEDEEEEEKEKDEEDE 199 ++AKLKEKYEKD+ + KGK G + AK +KK EEE+EEDEE+EE+EKDEEDE Sbjct: 283 RSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDE 342 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/75 (21%), Positives = 27/75 (36%) Query: 92 PKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEK 151 P RP S ++ + +KK E W N++ EK + K ++ Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDM 199 Query: 152 YEKDVVDCKLKGKFY 166 + D K + K Y Sbjct: 200 AKADKAHYKREMKTY 214 >gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens] Length = 487 Score = 212 bits (540), Expect = 2e-55 Identities = 112/180 (62%), Positives = 129/180 (71%), Gaps = 14/180 (7%) Query: 34 VPVNFAEFSKKCSGRWKTMSSKEKFKFG-------EMAKADEVCYDREMKDYGPAKGGKK 86 V VNF+EFSKKCS RWK MS+KEK KFG +MAKAD+ Y REMK Y P KG K Sbjct: 163 VSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETK 222 Query: 87 K---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVT 143 K DPNAPKRPPS FFL+ SE+ PKIK PG+S GDVAKKLGEMWNN +KQPY Sbjct: 223 KKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEK 282 Query: 144 KAAKLKEKYEKDVVDCKLKGKF----YGAKRPAKVARKKVEEEDEEDEEEEEKEKDEEDE 199 ++AKLKEKYEKD+ + KGK G + AK +KK EEE+EEDEE+EE+EKDEEDE Sbjct: 283 RSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDE 342 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/75 (21%), Positives = 27/75 (36%) Query: 92 PKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEK 151 P RP S ++ + +KK E W N++ EK + K ++ Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDM 199 Query: 152 YEKDVVDCKLKGKFY 166 + D K + K Y Sbjct: 200 AKADKAHYKREMKTY 214 >gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens] Length = 486 Score = 209 bits (533), Expect = 1e-54 Identities = 109/183 (59%), Positives = 131/183 (71%), Gaps = 14/183 (7%) Query: 34 VPVNFAEFSKKCSGRWKTMSSKEKFKFG-------EMAKADEVCYDREMKDYGPAKGGKK 86 V VNF+EFSKKCS RWK MS+KEK KFG +MAKAD+ Y REMK Y P KG K Sbjct: 163 VSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETK 222 Query: 87 K---DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVT 143 K DPNAPKRPPS FFL+ SE+ PKIK PG+S GDVAKKLGEMWNN +KQPY Sbjct: 223 KKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEK 282 Query: 144 KAAKLKEKYEKDVVDCKLKGKF----YGAKRPAKVARKKVEEEDEEDEEEEEKEKDEEDE 199 ++AKLKEKYEKD+ + KGK G + AK +KK EEE+EEDEE+EE+EKDE+++ Sbjct: 283 RSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEDED 342 Query: 200 QRN 202 + + Sbjct: 343 EED 345 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/75 (21%), Positives = 27/75 (36%) Query: 92 PKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEK 151 P RP S ++ + +KK E W N++ EK + K ++ Sbjct: 140 PVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDM 199 Query: 152 YEKDVVDCKLKGKFY 166 + D K + K Y Sbjct: 200 AKADKAHYKREMKTY 214 >gi|57232750 HMG2 like isoform 1 [Homo sapiens] Length = 186 Score = 125 bits (313), Expect = 3e-29 Identities = 61/157 (38%), Positives = 91/157 (57%), Gaps = 1/157 (0%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 M K KP+ +S+Y + + K++ P V F EFS+KCS +W+++S EK K+ Sbjct: 1 MGKEIQLKPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKY 60 Query: 61 GEMAKADEVCYDREMKDY-GPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 119 +AK D+ Y EM +Y G K +K+DP P+RPPS F LFC + ++K NP S+ Sbjct: 61 EALAKLDKARYQEEMMNYVGKRKKRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSV 120 Query: 120 GDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDV 156 VAK G+MW+ D EK PY + A L+ KY +++ Sbjct: 121 VQVAKATGKMWSTATDLEKHPYEQRVALLRAKYFEEL 157 Score = 36.6 bits (83), Expect = 0.016 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Query: 92 PKRPPSGFFLFCSEFRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYVTKAAKLK 149 PK S + F +R K K P +G + ++K E W +++ EK Y A K Sbjct: 9 PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68 Query: 150 EKYEKDVVDCKLKGKFYGAKRPAKVAR 176 +Y++++++ K K + P + R Sbjct: 69 ARYQEEMMNYVGKRKKRRKRDPQEPRR 95 >gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens] Length = 214 Score = 123 bits (308), Expect = 1e-28 Identities = 72/156 (46%), Positives = 94/156 (60%), Gaps = 5/156 (3%) Query: 42 SKKCSGRWKTMSSKEKFKFGEMAKADEVCYDREMKDYGPAKGGKK---KDPNAPKRPPSG 98 S + S + +S+ + + K D Y+REMK Y P K K +DPNAPK PP Sbjct: 11 STRSSTQMLQSTSQSFLRSAQRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLA 70 Query: 99 FFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVD 158 FF+F SE PKIK +PG+SI DVAKKLGEMWN + + +K PY KA KLKEKYEKD+ Sbjct: 71 FFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAA 129 Query: 159 CKLKGKFYGAKRPAKVARKKVEEEDEEDEEEEEKEK 194 KGK AK+ A + +K +++ EED+ K K Sbjct: 130 FGGKGKPDAAKKGA-IKAEKCKKKKEEDKMRNMKIK 164 >gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens] Length = 214 Score = 123 bits (308), Expect = 1e-28 Identities = 72/156 (46%), Positives = 94/156 (60%), Gaps = 5/156 (3%) Query: 42 SKKCSGRWKTMSSKEKFKFGEMAKADEVCYDREMKDYGPAKGGKK---KDPNAPKRPPSG 98 S + S + +S+ + + K D Y+REMK Y P K K +DPNAPK PP Sbjct: 11 STRSSTQMLQSTSQSFLRSAQRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLA 70 Query: 99 FFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVD 158 FF+F SE PKIK +PG+SI DVAKKLGEMWN + + +K PY KA KLKEKYEKD+ Sbjct: 71 FFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAA 129 Query: 159 CKLKGKFYGAKRPAKVARKKVEEEDEEDEEEEEKEK 194 KGK AK+ A + +K +++ EED+ K K Sbjct: 130 FGGKGKPDAAKKGA-IKAEKCKKKKEEDKMRNMKIK 164 >gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens] Length = 227 Score = 108 bits (270), Expect = 3e-24 Identities = 59/110 (53%), Positives = 74/110 (67%), Gaps = 2/110 (1%) Query: 85 KKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTK 144 K +DPNAPK PP FF+F SE PKIK +PG+SI DVAKKLGEMWN + + +K PY K Sbjct: 84 KFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLSISDVAKKLGEMWNYIAEDDKHPYEKK 142 Query: 145 AAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKVEEEDEEDEEEEEKEK 194 A KLKEKYEKD+ KGK AK+ A + +K +++ EED+ K K Sbjct: 143 AVKLKEKYEKDIAAFGGKGKPDAAKKGA-IKAEKCKKKKEEDKMRNMKIK 191 >gi|4507241 structure specific recognition protein 1 [Homo sapiens] Length = 709 Score = 80.5 bits (197), Expect = 9e-16 Identities = 48/133 (36%), Positives = 80/133 (60%), Gaps = 3/133 (2%) Query: 53 SSKEKFKFGEMAKADEVCYDREMKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKS 112 S +++ K ++ KA ++ DR+ + P + K KDPNAPKRP S + L+ + R KIKS Sbjct: 510 SDRDEKKRKQLKKA-KMAKDRKSRKK-PVEVKKGKDPNAPKRPMSAYMLWLNASREKIKS 567 Query: 113 TNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPA 172 +PGISI D++KK GE+W ++ +K+ + KA + YEK + + + G+ +KR Sbjct: 568 DHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYE-GGRGESSKRDK 626 Query: 173 KVARKKVEEEDEE 185 +KKV+ + E+ Sbjct: 627 SKKKKKVKVKMEK 639 Score = 44.7 bits (104), Expect = 6e-05 Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 2/90 (2%) Query: 5 DPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKFGEMA 64 DP P+ MSAY + ++ K +P + + + SKK WK MS ++K ++ A Sbjct: 543 DPNAPKRPMSAYMLWLNASREKIKSDHPGISIT--DLSKKAGEIWKGMSKEKKEEWDRKA 600 Query: 65 KADEVCYDREMKDYGPAKGGKKKDPNAPKR 94 + Y++ MK+Y +G K + K+ Sbjct: 601 EDARRDYEKAMKEYEGGRGESSKRDKSKKK 630 >gi|57232748 HMG2 like isoform 2 [Homo sapiens] Length = 112 Score = 75.1 bits (183), Expect = 4e-14 Identities = 34/82 (41%), Positives = 48/82 (58%) Query: 75 MKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLN 134 M G K +K+DP P+RPPS F LFC + ++K NP S+ VAK G+MW+ Sbjct: 2 MNYVGKRKKRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGKMWSTAT 61 Query: 135 DSEKQPYVTKAAKLKEKYEKDV 156 D EK PY + A L+ KY +++ Sbjct: 62 DLEKHPYEQRVALLRAKYFEEL 83 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 2/85 (2%) Query: 3 KGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKFGE 62 K DP++P+ S++ Q + K++NP V + +K W T + EK + + Sbjct: 13 KRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSV--VQVAKATGKMWSTATDLEKHPYEQ 70 Query: 63 MAKADEVCYDREMKDYGPAKGGKKK 87 Y E++ Y +KK Sbjct: 71 RVALLRAKYFEELELYRKQCNARKK 95 >gi|169165476 PREDICTED: similar to high-mobility group box 2 [Homo sapiens] Length = 91 Score = 68.2 bits (165), Expect = 5e-12 Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 2/87 (2%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 MAKGD + P+GKMSA F V+TC +EHKK P+ PV+F K R + KEK Sbjct: 1 MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKINL 59 Query: 61 GEMAKADEVCYDREMKDYGPAKGGKKK 87 + + + D EMKDY PAKG KKK Sbjct: 60 IKSQRWVKDA-DWEMKDYDPAKGHKKK 85 >gi|239748075 PREDICTED: similar to high-mobility group box 2 [Homo sapiens] Length = 91 Score = 68.2 bits (165), Expect = 5e-12 Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 2/87 (2%) Query: 1 MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60 MAKGD + P+GKMSA F V+TC +EHKK P+ PV+F K R + KEK Sbjct: 1 MAKGDLRNPKGKMSANVFFVKTCREEHKKLKPDGPVSFLRIFKSYL-RGERQFGKEKINL 59 Query: 61 GEMAKADEVCYDREMKDYGPAKGGKKK 87 + + + D EMKDY PAKG KKK Sbjct: 60 IKSQRWVKDA-DWEMKDYDPAKGHKKK 85 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.309 0.129 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,699,000 Number of Sequences: 37866 Number of extensions: 501982 Number of successful extensions: 20480 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 735 Number of HSP's successfully gapped in prelim test: 165 Number of HSP's that attempted gapping in prelim test: 7084 Number of HSP's gapped (non-prelim): 7619 length of query: 208 length of database: 18,247,518 effective HSP length: 98 effective length of query: 110 effective length of database: 14,536,650 effective search space: 1599031500 effective search space used: 1599031500 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.