LOC645101 7434

Name: LOC645101	Sequence: fasta or formatted (91aa)		NCBI GI: 169165476
Description: PREDICTED: similar to high-mobility group box 2		Not currently referenced in the text
Other entries for this name: alt prot {91aa} PREDICTED: similar to high-mobility group box 2 alt mRNA {91aa} PREDICTED: similar to high-mobility group box 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 5 1 C cysteine 2.2 2 1 D aspartate 6.6 6 1 E glutamate 5.5 5 2 F phenylalanine 5.5 5 2 G glycine 6.6 6 1 H histidine 2.2 2 1 I isoleucine 3.3 3 1 K lysine 20.9 19 4 L leucine 5.5 5 1 M methionine 3.3 3 1 N asparagine 3.3 3 1 P proline 4.4 4 1 Q glutamine 2.2 2 1 R arginine 7.7 7 1 S serine 4.4 4 1 T threonine 1.1 1 1 V valine 5.5 5 1 W tryptophan 2.2 2 1 Y tyrosine 2.2 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to high-mobility group box 2 [Ho... LOC645101 1.000 PREDICTED: similar to high-mobility group box 2 [Ho... LOC645101 0.988 PREDICTED: similar to high-mobility group box 2 [Ho... HMGB3 0.339 high-mobility group box 3 LOC441795 0.298 PREDICTED: high mobility group protein B3-like prot... LOC441795 0.298 PREDICTED: high mobility group protein B3-like prot... LOC203510 0.280 PREDICTED: similar to hCG1644442 LOC203510 0.280 PREDICTED: similar to hCG1644442 LOC203510 0.280 PREDICTED: hypothetical protein LOC203510 LOC646993 0.256 PREDICTED: similar to high mobility group box 3 [Ho... LOC646993 0.256 PREDICTED: similar to high mobility group box 3 [Ho... HMGB2 0.256 high-mobility group box 2 HMGB2 0.256 high-mobility group box 2 HMGB2 0.256 high-mobility group box 2 HMGB1 0.244 high-mobility group box 1 LOC646993 0.232 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.232 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.232 PREDICTED: similar to high mobility group box 3 [Ho... LOC729595 0.232 PREDICTED: similar to high mobility group box 3 iso... HMGB1L1 0.214 high-mobility group box 1-like 1 SP100 0.071 nuclear antigen Sp100 isoform 2 LOC100293660 0.012 PREDICTED: similar to hCG1990723 LOC100291414 0.012 PREDICTED: hypothetical protein XP_002347250 LOC100288976 0.012 PREDICTED: hypothetical protein XP_002343115 SPTA1 0.006 spectrin, alpha, erythrocytic 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.