SPEF1 37125

Name: SPEF1	Sequence: fasta or formatted (236aa)		NCBI GI: 89363026
Description: calponin-homology and microtubule-associated protein		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 15 1 C cysteine 0.4 1 1 D aspartate 5.1 12 2 E glutamate 6.8 16 2 F phenylalanine 2.1 5 1 G glycine 5.9 14 3 H histidine 1.7 4 1 I isoleucine 2.5 6 1 K lysine 5.5 13 1 L leucine 12.3 29 2 M methionine 2.5 6 1 N asparagine 3.8 9 1 P proline 6.8 16 2 Q glutamine 9.3 22 2 R arginine 9.7 23 3 S serine 6.4 15 2 T threonine 0.4 1 1 V valine 8.9 21 2 W tryptophan 1.3 3 1 Y tyrosine 2.1 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calponin-homology and microtubule-associated protein... SPATA4 0.097 spermatogenesis associated 4 SMARCD3 0.022 SWI/SNF related, matrix associated, actin dependent ... SMARCD3 0.022 SWI/SNF related, matrix associated, actin dependent ... SMARCD3 0.020 SWI/SNF related, matrix associated, actin dependent ... TARBP1 0.020 TAR RNA binding protein 1 SMARCA2 0.018 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.018 SWI/SNF-related matrix-associated actin-dependent re... BSN 0.018 bassoon protein SFPQ 0.018 splicing factor proline/glutamine rich (polypyrimidin... ProSAPiP1 0.016 ProSAPiP1 protein PCNT 0.016 pericentrin CEP250 0.016 centrosomal protein 2 CENPE 0.016 centromere protein E LOC283767 0.013 golgi autoantigen, golgin subfamily a-like LOC651986 0.013 PREDICTED: similar to forkhead box L2 LOC651986 0.013 PREDICTED: similar to forkhead box L2 LOC100288524 0.013 PREDICTED: hypothetical protein XP_002342748 LOC651986 0.013 PREDICTED: similar to forkhead box L2 ITIH5L 0.011 inter-alpha (globulin) inhibitor H5-like SMARCA4 0.011 SWI/SNF-related matrix-associated actin-dependent r... EHMT1 0.011 euchromatic histone-lysine N-methyltransferase 1 is... EHMT1 0.011 euchromatic histone-lysine N-methyltransferase 1 is... MYST3 0.011 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.011 MYST histone acetyltransferase (monocytic leukemia)... MYST3 0.011 MYST histone acetyltransferase (monocytic leukemia)... YEATS4 0.011 glioma-amplified sequence-41 MAVS 0.011 virus-induced signaling adapter MKL2 0.011 megakaryoblastic leukemia 2 protein MARVELD3 0.011 MARVEL domain containing 3 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.