Guide to the Human Genome
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Name: OTOG Sequence: fasta or formatted (2852aa) NCBI GI: 239744300
Description:

PREDICTED: otogelin isoform 2

Referenced in:

Auditory and Vestibular Functions
Mucins

Other entries for this name:
alt prot [2924aa] PREDICTED: otogelin isoform 1
alt prot [2924aa] PREDICTED: otogelin isoform 1
alt prot [2852aa] PREDICTED: otogelin isoform 2
alt prot [2924aa] PREDICTED: otogelin isoform 2
alt mRNA [2852aa] PREDICTED: otogelin isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3        238           3
 C cysteine            7.2        204           2
 D aspartate           4.8        138           3
 E glutamate           5.0        144           2
 F phenylalanine       3.2         90           2
 G glycine             6.6        189           2
 H histidine           2.9         82           2
 I isoleucine          2.4         69           2
 K lysine              2.2         64           2
 L leucine             8.6        246           3
 M methionine          1.3         37           1
 N asparagine          2.2         63           3
 P proline             8.8        252           2
 Q glutamine           4.7        133           2
 R arginine            4.9        140           2
 S serine              8.4        240           3
 T threonine           7.5        214           3
 V valine              7.5        215           2
 W tryptophan          1.2         33           1
 Y tyrosine            2.1         61           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: otogelin isoform 2 
OTOG                  1.000   PREDICTED: otogelin isoform 1 
OTOG                  0.999   PREDICTED: otogelin isoform 2 
OTOG                  0.998   PREDICTED: otogelin isoform 2 
OTOG                  0.998   PREDICTED: otogelin isoform 1 
OTOG                  0.997   PREDICTED: otogelin isoform 1 
C12orf64              0.190   PREDICTED: chromosome 12 open reading frame 64 [Hom...
C12orf64              0.190   PREDICTED: chromosome 12 open reading frame 64 [Hom...
C12orf64              0.190   PREDICTED: hypothetical protein LOC283310 
VWF                   0.105   von Willebrand factor preproprotein 
MUC2                  0.098   mucin 2 precursor 
LOC100132635          0.098   PREDICTED: similar to mucin 5, partial 
MUC5B                 0.092   mucin 5, subtype B, tracheobronchial 
MUC5AC                0.091   mucin 5AC 
SSPO                  0.087   SCO-spondin 
MUC6                  0.081   mucin 6, gastric 
LOC100291118          0.075   PREDICTED: hypothetical protein XP_002347351 
LOC100287737          0.075   PREDICTED: hypothetical protein XP_002343203 
LOC100294420          0.068   PREDICTED: similar to mucin 2 
LOC100290309          0.048   PREDICTED: hypothetical protein XP_002348012 
FCGBP                 0.047   Fc fragment of IgG binding protein 
LOC100133944          0.045   PREDICTED: similar to Fc fragment of IgG binding pr...
LOC100293676          0.043   PREDICTED: similar to Fc fragment of IgG binding pr...
LOC100293409          0.041   PREDICTED: similar to Mucin-19 
TECTA                 0.035   tectorin alpha precursor 
ZAN                   0.034   zonadhesin isoform 3 
ZAN                   0.034   zonadhesin isoform 6 
KCP                   0.023   cysteine rich BMP regulator 2 isoform 1 
LOC100293643          0.020   PREDICTED: similar to Fc fragment of IgG binding pr...
BMPER                 0.020   BMP-binding endothelial regulator precursor protein ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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