Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: UNC13C Sequence: fasta or formatted (2214aa) NCBI GI: 122937514
Description:

unc-13 homolog C

Referenced in:

Synapses

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3        118           2
 C cysteine            1.5         34           1
 D aspartate           6.5        143           3
 E glutamate           7.9        176           2
 F phenylalanine       3.7         83           2
 G glycine             4.7        104           3
 H histidine           2.0         45           1
 I isoleucine          5.0        111           2
 K lysine              8.1        180           2
 L leucine             8.8        195           2
 M methionine          2.5         56           2
 N asparagine          4.4         97           2
 P proline             3.4         76           2
 Q glutamine           5.3        118           2
 R arginine            4.2         94           2
 S serine             10.4        231           4
 T threonine           6.5        143           3
 V valine              5.1        113           2
 W tryptophan          1.2         26           1
 Y tyrosine            3.2         71           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   unc-13 homolog C 
UNC13B                0.416   UNC13 (C. elegans)-like 
UNC13A                0.414   unc-13 homolog A 
PRKCG                 0.013   protein kinase C, gamma 
UNC13D                0.013   unc-13 homolog D 
PRKCA                 0.012   protein kinase C, alpha 
PRKCB                 0.011   protein kinase C, beta isoform 1 
PRKCB                 0.011   protein kinase C, beta isoform 2 
RASGRP3               0.011   RAS guanyl releasing protein 3 (calcium and DAG-reg...
RASGRP3               0.011   RAS guanyl releasing protein 3 (calcium and DAG-regu...
RASGRP3               0.011   RAS guanyl releasing protein 3 (calcium and DAG-regul...
RASGRP1               0.011   RAS guanyl releasing protein 1 isoform b 
RASGRP1               0.011   RAS guanyl releasing protein 1 isoform a 
MCTP1                 0.010   multiple C2 domains, transmembrane 1 isoform S [Homo...
MCTP1                 0.010   multiple C2 domains, transmembrane 1 isoform L [Hom...
RASGRP4               0.010   RAS guanyl releasing protein 4 isoform a 
RASGRP4               0.010   RAS guanyl releasing protein 4 isoform g 
RASGRP4               0.010   RAS guanyl releasing protein 4 isoform f 
RASGRP4               0.010   RAS guanyl releasing protein 4 isoform e 
RASGRP4               0.010   RAS guanyl releasing protein 4 isoform d 
RASGRP4               0.010   RAS guanyl releasing protein 4 isoform c 
RASGRP4               0.010   RAS guanyl releasing protein 4 isoform b 
MCTP2                 0.009   multiple C2 domains, transmembrane 2 isoform 2 [Hom...
MCTP2                 0.009   multiple C2 domains, transmembrane 2 isoform 1 [Hom...
MCTP2                 0.009   multiple C2 domains, transmembrane 2 isoform 3 [Hom...
DSPP                  0.009   dentin sialophosphoprotein preproprotein 
NEDD4L                0.009   neural precursor cell expressed, developmentally dow...
NEDD4L                0.009   neural precursor cell expressed, developmentally do...
NEDD4L                0.009   neural precursor cell expressed, developmentally do...
NEDD4L                0.009   neural precursor cell expressed, developmentally do...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press