Guide to the Human Genome
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Name: MRPS36 Sequence: fasta or formatted (103aa) NCBI GI: 15150811
Description:

mitochondrial ribosomal protein S36

Referenced in:

Ribosomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9          5           1
 C cysteine            0.0          0           0
 D aspartate           3.9          4           1
 E glutamate           5.8          6           2
 F phenylalanine       1.9          2           1
 G glycine             5.8          6           2
 H histidine           2.9          3           1
 I isoleucine          4.9          5           2
 K lysine              7.8          8           1
 L leucine             6.8          7           2
 M methionine          4.9          5           2
 N asparagine          1.9          2           1
 P proline            10.7         11           2
 Q glutamine           5.8          6           1
 R arginine            7.8          8           2
 S serine             12.6         13           2
 T threonine           2.9          3           1
 V valine              6.8          7           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.9          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial ribosomal protein S36 
FOXK2                 0.044   forkhead box K2 
DOCK3                 0.022   dedicator of cytokinesis 3 
AKAP13                0.022   A-kinase anchor protein 13 isoform 1 
AKAP13                0.022   A-kinase anchor protein 13 isoform 3 
AKAP13                0.022   A-kinase anchor protein 13 isoform 2 
AKAP7                 0.016   A-kinase anchor protein 7 isoform beta 
NHSL1                 0.016   NHS-like 1 
CACNA1G               0.016   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.016   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.016   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.016   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.016   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.016   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.016   voltage-dependent calcium channel alpha 1G subunit i...
PRUNE2                0.011   prune homolog 2 
NICN1                 0.011   nicolin 1 
ITIH5L                0.011   inter-alpha (globulin) inhibitor H5-like 
ZRANB1                0.011   zinc finger, RAN-binding domain containing 1 protei...
SP110                 0.011   SP110 nuclear body protein isoform a 
SP110                 0.011   SP110 nuclear body protein isoform b 
SP110                 0.011   SP110 nuclear body protein isoform c 
NIPBL                 0.011   delangin isoform B 
NIPBL                 0.011   delangin isoform A 
CCDC88C               0.011   DVL-binding protein DAPLE 
LOC100291925          0.005   PREDICTED: hypothetical protein XP_002345110 
LOC100291392          0.005   PREDICTED: hypothetical protein XP_002347851 
LOC100287042          0.005   PREDICTED: hypothetical protein XP_002343584 
DLG3                  0.005   synapse-associated protein 102 isoform a 
PRRG4                 0.005   proline rich Gla (G-carboxyglutamic acid) 4 (transme...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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