Guide to the Human Genome
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Name: AKAP7 Sequence: fasta or formatted (326aa) NCBI GI: 7706527
Description:

A-kinase anchor protein 7 isoform gamma

Referenced in:

Cyclic Nucleotides

Other entries for this name:
alt prot [104aa] A-kinase anchor protein 7 isoform beta
alt prot [81aa] A-kinase anchor protein 7 isoform alpha
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         14           2
 C cysteine            0.9          3           1
 D aspartate           6.1         20           2
 E glutamate           9.5         31           2
 F phenylalanine       4.0         13           1
 G glycine             6.4         21           2
 H histidine           1.8          6           1
 I isoleucine          7.4         24           2
 K lysine             10.1         33           3
 L leucine             9.8         32           2
 M methionine          2.1          7           1
 N asparagine          6.7         22           2
 P proline             3.4         11           1
 Q glutamine           5.5         18           2
 R arginine            3.7         12           1
 S serine              6.1         20           2
 T threonine           3.7         12           1
 V valine              5.5         18           1
 W tryptophan          0.6          2           1
 Y tyrosine            2.1          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   A-kinase anchor protein 7 isoform gamma 
AKAP7                 0.171   A-kinase anchor protein 7 isoform beta 
AKAP7                 0.170   A-kinase anchor protein 7 isoform alpha 
LOC642597             0.032   hypothetical protein LOC642597 
LOC100134091          0.011   PREDICTED: similar to FSHD region gene 1 isoform 2 ...
ABCA2                 0.011   ATP-binding cassette, sub-family A, member 2 isoform...
ABCA2                 0.011   ATP-binding cassette, sub-family A, member 2 isoform...
DDX60L                0.010   DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like [Hom...
TOPORS                0.008   topoisomerase I binding, arginine/serine-rich 
DNAJC21               0.008   DnaJ homology subfamily A member 5 isoform 1 
CASQ2                 0.006   cardiac calsequestrin 2 precursor 
KIAA1239              0.006   hypothetical protein LOC57495 
ADSL                  0.006   adenylosuccinate lyase isoform b 
ADSL                  0.006   adenylosuccinate lyase isoform a 
BRD4                  0.005   bromodomain-containing protein 4 isoform short 
BRD4                  0.005   bromodomain-containing protein 4 isoform long 
ABCF1                 0.005   ATP-binding cassette, sub-family F, member 1 isoform...
ABCF1                 0.005   ATP-binding cassette, sub-family F, member 1 isoform...
SNX25                 0.005   sorting nexin 25 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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