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Search of human proteins with 20270365
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20270365 CD200 receptor 1 isoform a [Homo sapiens]
(348 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20270365 CD200 receptor 1 isoform a [Homo sapiens] 716 0.0
gi|25777659 CD200 receptor 1 isoform d [Homo sapiens] 658 0.0
gi|151301013 CD200 cell surface glycoprotein receptor 2 [Homo sa... 365 e-101
gi|25777655 CD200 receptor 1 isoform b [Homo sapiens] 357 7e-99
gi|25777657 CD200 receptor 1 isoform c [Homo sapiens] 300 1e-81
gi|5360210 poliovirus receptor related 2 isoform alpha precursor... 46 6e-05
gi|112789532 poliovirus receptor related 2 isoform delta precurs... 46 6e-05
gi|11386199 poliovirus receptor-related 3 [Homo sapiens] 45 1e-04
gi|118572606 hemicentin 1 [Homo sapiens] 44 2e-04
gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo sapi... 41 0.002
gi|115529478 neural cell adhesion molecule 1 isoform 3 [Homo sap... 41 0.002
gi|66346706 neuronal growth regulator 1 [Homo sapiens] 40 0.003
gi|54607118 leucine-rich repeats and immunoglobulin-like domains... 40 0.004
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 39 0.009
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 39 0.009
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] 39 0.009
gi|148664211 immunoglobulin superfamily, member 4D isoform 2 [Ho... 37 0.026
gi|148664190 immunoglobulin superfamily, member 4D isoform 1 [Ho... 37 0.026
gi|42560233 poliovirus receptor-related 1 isoform 3 [Homo sapiens] 37 0.026
gi|42560231 poliovirus receptor-related 1 isoform 2 [Homo sapiens] 37 0.026
gi|42560237 poliovirus receptor-related 1 isoform 1 [Homo sapiens] 37 0.026
gi|33519481 neural cell adhesion molecule 2 precursor [Homo sapi... 37 0.026
gi|221316760 L1 cell adhesion molecule isoform 3 precursor [Homo... 37 0.034
gi|13435353 L1 cell adhesion molecule isoform 2 precursor [Homo ... 37 0.034
gi|4557707 L1 cell adhesion molecule isoform 1 precursor [Homo s... 37 0.034
gi|209413732 poliovirus receptor isoform delta [Homo sapiens] 37 0.034
gi|209413730 poliovirus receptor isoform gamma [Homo sapiens] 37 0.034
gi|209413728 poliovirus receptor isoform beta [Homo sapiens] 37 0.034
gi|209413726 poliovirus receptor isoform alpha [Homo sapiens] 37 0.034
gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo sap... 37 0.034
>gi|20270365 CD200 receptor 1 isoform a [Homo sapiens]
Length = 348
Score = 716 bits (1847), Expect = 0.0
Identities = 348/348 (100%), Positives = 348/348 (100%)
Query: 1 MLCPWRTANLGLLLILTIFLVAEAEGAAQPNNSLMLQTSKENHALASSSLCMDEKQITQN 60
MLCPWRTANLGLLLILTIFLVAEAEGAAQPNNSLMLQTSKENHALASSSLCMDEKQITQN
Sbjct: 1 MLCPWRTANLGLLLILTIFLVAEAEGAAQPNNSLMLQTSKENHALASSSLCMDEKQITQN 60
Query: 61 YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE 120
YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE
Sbjct: 61 YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE 120
Query: 121 TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTL 180
TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTL
Sbjct: 121 TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTL 180
Query: 181 FQNRNRTAVCKAVAGKPAAHISWIPEGDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCH 240
FQNRNRTAVCKAVAGKPAAHISWIPEGDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCH
Sbjct: 181 FQNRNRTAVCKAVAGKPAAHISWIPEGDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCH 240
Query: 241 VSHLTGNKSLYIELLPVPGAKKSAKLYIPYIILTIIILTIVGFIWLLKVNGCRKYKLNKT 300
VSHLTGNKSLYIELLPVPGAKKSAKLYIPYIILTIIILTIVGFIWLLKVNGCRKYKLNKT
Sbjct: 241 VSHLTGNKSLYIELLPVPGAKKSAKLYIPYIILTIIILTIVGFIWLLKVNGCRKYKLNKT 300
Query: 301 ESTPVVEEDEMQPYASYTEKNNPLYDTTNKVKASEALQSEVDTDLHTL 348
ESTPVVEEDEMQPYASYTEKNNPLYDTTNKVKASEALQSEVDTDLHTL
Sbjct: 301 ESTPVVEEDEMQPYASYTEKNNPLYDTTNKVKASEALQSEVDTDLHTL 348
>gi|25777659 CD200 receptor 1 isoform d [Homo sapiens]
Length = 325
Score = 658 bits (1698), Expect = 0.0
Identities = 325/348 (93%), Positives = 325/348 (93%), Gaps = 23/348 (6%)
Query: 1 MLCPWRTANLGLLLILTIFLVAEAEGAAQPNNSLMLQTSKENHALASSSLCMDEKQITQN 60
MLCPWRTANLGLLLILTIFLVA ASSSLCMDEKQITQN
Sbjct: 1 MLCPWRTANLGLLLILTIFLVA-----------------------ASSSLCMDEKQITQN 37
Query: 61 YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE 120
YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE
Sbjct: 38 YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE 97
Query: 121 TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTL 180
TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTL
Sbjct: 98 TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTL 157
Query: 181 FQNRNRTAVCKAVAGKPAAHISWIPEGDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCH 240
FQNRNRTAVCKAVAGKPAAHISWIPEGDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCH
Sbjct: 158 FQNRNRTAVCKAVAGKPAAHISWIPEGDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCH 217
Query: 241 VSHLTGNKSLYIELLPVPGAKKSAKLYIPYIILTIIILTIVGFIWLLKVNGCRKYKLNKT 300
VSHLTGNKSLYIELLPVPGAKKSAKLYIPYIILTIIILTIVGFIWLLKVNGCRKYKLNKT
Sbjct: 218 VSHLTGNKSLYIELLPVPGAKKSAKLYIPYIILTIIILTIVGFIWLLKVNGCRKYKLNKT 277
Query: 301 ESTPVVEEDEMQPYASYTEKNNPLYDTTNKVKASEALQSEVDTDLHTL 348
ESTPVVEEDEMQPYASYTEKNNPLYDTTNKVKASEALQSEVDTDLHTL
Sbjct: 278 ESTPVVEEDEMQPYASYTEKNNPLYDTTNKVKASEALQSEVDTDLHTL 325
>gi|151301013 CD200 cell surface glycoprotein receptor 2 [Homo
sapiens]
Length = 271
Score = 365 bits (936), Expect = e-101
Identities = 188/255 (73%), Positives = 204/255 (80%), Gaps = 7/255 (2%)
Query: 46 ASSSLCMDEKQITQNYSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQP 105
ASSS CM KQ+TQNYS + AE N S PV M NAVLCCPPIALRNLIIITWEIILRGQP
Sbjct: 16 ASSSSCMGGKQMTQNYSTIFAEGNISQPVLMDINAVLCCPPIALRNLIIITWEIILRGQP 75
Query: 106 SCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFH 165
SCTKAYKKETNETKETNCT ERITWVSRPDQNSDLQIR V THDGYYR I+VTPDGNFH
Sbjct: 76 SCTKAYKKETNETKETNCTVERITWVSRPDQNSDLQIRPVDTTHDGYYRGIVVTPDGNFH 135
Query: 166 RGYHLQVLVTPEVTLFQNRNRTAVCKAVAGKPAAHISWIPEGD-CATKQEYWSNGTVTVK 224
RGYHLQVLVTPEV LFQ+RN TAVCKAV GKPAA ISWIPEG ATKQEYW NGTVTVK
Sbjct: 136 RGYHLQVLVTPEVNLFQSRNITAVCKAVTGKPAAQISWIPEGSILATKQEYWGNGTVTVK 195
Query: 225 STCHWEVHNVSTVTCHVSHLTGNKSLYIEL---LPVPGAKKSAKLYIPYIILT--IIILT 279
STC WE H STVTCHVSHLTGNKSL ++L L G+ + L I Y+ L+ ++IL
Sbjct: 196 STCPWEGHK-STVTCHVSHLTGNKSLSVKLNSGLRTSGSPALSLLIILYVKLSLFVVILV 254
Query: 280 IVGFIWLLKVNGCRK 294
GF++ ++N RK
Sbjct: 255 TTGFVFFQRINHVRK 269
>gi|25777655 CD200 receptor 1 isoform b [Homo sapiens]
Length = 188
Score = 357 bits (917), Expect = 7e-99
Identities = 173/173 (100%), Positives = 173/173 (100%)
Query: 1 MLCPWRTANLGLLLILTIFLVAEAEGAAQPNNSLMLQTSKENHALASSSLCMDEKQITQN 60
MLCPWRTANLGLLLILTIFLVAEAEGAAQPNNSLMLQTSKENHALASSSLCMDEKQITQN
Sbjct: 1 MLCPWRTANLGLLLILTIFLVAEAEGAAQPNNSLMLQTSKENHALASSSLCMDEKQITQN 60
Query: 61 YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE 120
YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE
Sbjct: 61 YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE 120
Query: 121 TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVL 173
TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVL
Sbjct: 121 TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVL 173
>gi|25777657 CD200 receptor 1 isoform c [Homo sapiens]
Length = 165
Score = 300 bits (768), Expect = 1e-81
Identities = 150/173 (86%), Positives = 150/173 (86%), Gaps = 23/173 (13%)
Query: 1 MLCPWRTANLGLLLILTIFLVAEAEGAAQPNNSLMLQTSKENHALASSSLCMDEKQITQN 60
MLCPWRTANLGLLLILTIFLVA ASSSLCMDEKQITQN
Sbjct: 1 MLCPWRTANLGLLLILTIFLVA-----------------------ASSSLCMDEKQITQN 37
Query: 61 YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE 120
YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE
Sbjct: 38 YSKVLAEVNTSWPVKMATNAVLCCPPIALRNLIIITWEIILRGQPSCTKAYKKETNETKE 97
Query: 121 TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVL 173
TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVL
Sbjct: 98 TNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVL 150
>gi|5360210 poliovirus receptor related 2 isoform alpha precursor
[Homo sapiens]
Length = 479
Score = 45.8 bits (107), Expect = 6e-05
Identities = 44/142 (30%), Positives = 63/142 (44%), Gaps = 24/142 (16%)
Query: 126 ERITWVSRP-----DQNSDLQIRTVA-----ITHDGYYRCIMVT-PDGNFHRGYHLQVLV 174
ER+++VS D ++LQ T+A + +G Y C T P G+ L+V+
Sbjct: 101 ERLSFVSAKQSTGQDTEAELQDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRVIA 160
Query: 175 TPE-------VTLFQNRNRTAVCKAVAGKPAAHISWIPEGDCATKQEYWSN---GTVTVK 224
P+ VT Q+ A+C + G+P A ISW+ D K+ S GTVTV
Sbjct: 161 KPKNQAEAQKVTFSQDPTTVALCISKEGRPPARISWLSSLDWEAKETQVSGTLAGTVTVT 220
Query: 225 STCHWEVHNVS---TVTCHVSH 243
S + TVTC V H
Sbjct: 221 SRFTLVPSGRADGVTVTCKVEH 242
>gi|112789532 poliovirus receptor related 2 isoform delta precursor
[Homo sapiens]
Length = 538
Score = 45.8 bits (107), Expect = 6e-05
Identities = 44/142 (30%), Positives = 63/142 (44%), Gaps = 24/142 (16%)
Query: 126 ERITWVSRP-----DQNSDLQIRTVA-----ITHDGYYRCIMVT-PDGNFHRGYHLQVLV 174
ER+++VS D ++LQ T+A + +G Y C T P G+ L+V+
Sbjct: 101 ERLSFVSAKQSTGQDTEAELQDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRVIA 160
Query: 175 TPE-------VTLFQNRNRTAVCKAVAGKPAAHISWIPEGDCATKQEYWSN---GTVTVK 224
P+ VT Q+ A+C + G+P A ISW+ D K+ S GTVTV
Sbjct: 161 KPKNQAEAQKVTFSQDPTTVALCISKEGRPPARISWLSSLDWEAKETQVSGTLAGTVTVT 220
Query: 225 STCHWEVHNVS---TVTCHVSH 243
S + TVTC V H
Sbjct: 221 SRFTLVPSGRADGVTVTCKVEH 242
>gi|11386199 poliovirus receptor-related 3 [Homo sapiens]
Length = 549
Score = 44.7 bits (104), Expect = 1e-04
Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 12/142 (8%)
Query: 95 ITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYR 154
I+WE I G+ S T A R+ + + ++ + + + + G Y
Sbjct: 89 ISWEKI-HGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSGKYI 147
Query: 155 CIMVT-PDGNFHRGYHLQVLVTPEVTLFQ---------NRNRTAVCKAVAGKPAAHISWI 204
C VT P GN + VLV P V+L + N A+C A GKP AHI W
Sbjct: 148 CKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWE 207
Query: 205 PE-GDCATKQEYWSNGTVTVKS 225
+ G+ + + N T T+ S
Sbjct: 208 GDLGEMESTTTSFPNETATIIS 229
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 44.3 bits (103), Expect = 2e-04
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 13/80 (16%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP------------EVTLFQNRNRT 187
LQI V + H G Y C+ +P G+ R + L V V+P +VT+ N +
Sbjct: 2535 LQITNVQVPHTGRYTCLASSPAGHKSRSFSLNVFVSPTIAGVGSDGNPEDVTVILNSPTS 2594
Query: 188 AVCKAVAGKPAAHISWIPEG 207
VC+A + PA I+W +G
Sbjct: 2595 LVCEAYSYPPAT-ITWFKDG 2613
Score = 39.3 bits (90), Expect = 0.005
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 17/129 (13%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP-----------EVTLFQNRNRTA 188
LQI + G Y C+ V G Y ++VLV P EVT+ N++
Sbjct: 2833 LQIPRAKVEDAGRYTCVAVNEAGEDSLQYDVRVLVPPIIKGANSDLPEEVTVLVNKSALI 2892
Query: 189 VCKAVAGKPAAHISWIPEGDCATKQE---YWSNGTVTVKSTCHWEVHNVSTVTCHVSHLT 245
C + +G PA SW +G + + + SNG + + ++ ++ C +
Sbjct: 2893 ECLS-SGSPAPRNSWQKDGQPLLEDDHHKFLSNGRIL--QILNTQITDIGRYVCVAENTA 2949
Query: 246 GNKSLYIEL 254
G+ Y L
Sbjct: 2950 GSAKKYFNL 2958
Score = 38.5 bits (88), Expect = 0.009
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 10/78 (12%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRNRTAVC 190
L+I T + G Y C+ +P G+ + Y ++V V P ++T+ +NR T C
Sbjct: 3584 LRISTAQVEDTGRYTCLASSPAGDDDKEYLVRVHVPPNIAGTDEPRDITVLRNRQVTLEC 3643
Query: 191 KAVAGKPAAHISWIPEGD 208
K+ A P I+W+ G+
Sbjct: 3644 KSDAVPPPV-ITWLRNGE 3660
Score = 38.1 bits (87), Expect = 0.012
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 17/132 (12%)
Query: 136 QNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEV-------TLFQNRNRTA 188
+N L I++ +T G Y C+ G R LQV V P + T+ N T
Sbjct: 3764 ENGFLHIQSAHVTDTGRYLCMATNAAGTDRRRIDLQVHVPPSIAPGPTNMTVIVNVQTTL 3823
Query: 189 VCKAVAGKPAAHISWIPEGDCATKQE------YWSNGTVTVKSTCHWEVHNVSTVTCHVS 242
C+A G P I+W G + S+G++ + S V + +T C V+
Sbjct: 3824 ACEA-TGIPKPSINWRKNGHLLNVDQNQNSYRLLSSGSLVIISP---SVDDTATYECTVT 3879
Query: 243 HLTGNKSLYIEL 254
+ G+ ++L
Sbjct: 3880 NGAGDDKRTVDL 3891
Score = 37.0 bits (84), Expect = 0.026
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 16/127 (12%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAV-------CKA 192
+ I + I+ G Y+C+ + G Y LQV V P ++ N V C+A
Sbjct: 1976 IDIESAQISDAGIYKCVAINSAGATELFYSLQVHVAPSISGSNNMVAVVVNNPVRLECEA 2035
Query: 193 VAGKPAAHISWIPEGDCATKQEYWSNGTVT-----VKSTCHWEVHNVSTVTCHVSHLTGN 247
G PA ++W+ +G + +SNG + + ++ + TC + G
Sbjct: 2036 -RGIPAPSLTWLKDGSPVSS---FSNGLQVLSGGRILALTSAQISDTGRYTCVAVNAAGE 2091
Query: 248 KSLYIEL 254
K I+L
Sbjct: 2092 KQRDIDL 2098
Score = 35.4 bits (80), Expect = 0.076
Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 23/130 (17%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------------EVTLFQNR 184
LQI + G Y C+ G + Y ++V + P EV + N
Sbjct: 2631 LQILNAQEDNAGRYSCVATNEAGEMIKHYEVKVYIPPIINKGDLWGPGLSPKEVKIKVNN 2690
Query: 185 NRTAVCKAVAGKPAAHISWIPEGDCATKQEY---WSNG-TVTVKSTCHWEVHNVSTVTCH 240
T C+A A P+A +SW +G ++ +NG T+ +K ++ + TC
Sbjct: 2691 TLTLECEAYA-IPSASLSWYKDGQPLKSDDHVNIAANGHTLQIKEA---QISDTGRYTCV 2746
Query: 241 VSHLTGNKSL 250
S++ G L
Sbjct: 2747 ASNIAGEDEL 2756
Score = 34.3 bits (77), Expect = 0.17
Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 15/114 (13%)
Query: 103 GQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDG 162
G P T A+ K + ++ + RI S LQI + G Y CI +G
Sbjct: 3177 GIPPPTIAWLKNHKRIENSDSLEVRIL-----SGGSKLQIARSQHSDSGNYTCIASNMEG 3231
Query: 163 NFHRGYHLQVLVTP---------EVTLFQNRNRTAVCKAVAGKPAAHISWIPEG 207
+ Y L + V P +V++ N VC A G P I W+ +G
Sbjct: 3232 KAQKYYFLSIQVPPSVAGAEIPSDVSVLLGENVELVCNA-NGIPTPLIQWLKDG 3284
Score = 32.7 bits (73), Expect = 0.49
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Query: 135 DQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP----------EVTLFQNR 184
D+ LQ++ + ++ G Y C+ V G + Y L V P +++ +
Sbjct: 2343 DEGHILQLKNIHVSDTGRYVCVAVNVAGMTDKKYDLSVHAPPSIIGNHRSPENISVVEKN 2402
Query: 185 NRTAVCKAVAGKPAAHISWIPEG 207
+ + C+A +G P I+W +G
Sbjct: 2403 SVSLTCEA-SGIPLPSITWFKDG 2424
Score = 32.3 bits (72), Expect = 0.65
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 13/121 (10%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRNRTAVC 190
L++ + G Y C++ G + + L VLV P +V + + ++ T C
Sbjct: 2442 LRLMQTTMEDAGQYTCVVRNAAGEERKIFGLSVLVPPHIVGENTLEDVKVKEKQSVTLTC 2501
Query: 191 KAVAGKPAAHISWIPEGDCATKQE--YWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTGNK 248
+ V G P I+W +G + E + +G ++ T + +V + TC S G+K
Sbjct: 2502 E-VTGNPVPEITWHKDGQPLQEDEAHHIISGGRFLQIT-NVQVPHTGRYTCLASSPAGHK 2559
Query: 249 S 249
S
Sbjct: 2560 S 2560
Score = 32.3 bits (72), Expect = 0.65
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCK-------A 192
LQI IT G Y C+ G+ + ++L V V P V ++ N T V
Sbjct: 2928 LQILNTQITDIGRYVCVAENTAGSAKKYFNLNVHVPPSVIGPKSENLTVVVNNFISLTCE 2987
Query: 193 VAGKPAAHISWI 204
V+G P +SW+
Sbjct: 2988 VSGFPPPDLSWL 2999
Score = 32.0 bits (71), Expect = 0.84
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 23/136 (16%)
Query: 146 AITHD-GYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNR---------TAV---CKA 192
A+T D G Y C+ P G R ++L V VTP T+ N++ T++ C+A
Sbjct: 3309 ALTSDTGKYTCVATNPAGEEDRIFNLNVYVTP--TIRGNKDEAEKLMTLVDTSINIECRA 3366
Query: 193 VAGKPAAHISWIPEG---DCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTG--N 247
G P I+W+ G ++ + G V +V +V+ TC S+ G N
Sbjct: 3367 -TGTPPPQINWLKNGLPLPLSSHIRLLAAGQVI--RIVRAQVSDVAVYTCVASNRAGVDN 3423
Query: 248 KSLYIELLPVPGAKKS 263
K +++ P S
Sbjct: 3424 KHYNLQVFAPPNMDNS 3439
Score = 31.6 bits (70), Expect = 1.1
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 11/83 (13%)
Query: 135 DQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP--EVTLFQNRNRTAV--- 189
D+ L I ++ Y C + G + +H+ V V P E L N+ V
Sbjct: 1598 DKGQYLHIPRAQVSDSATYTCHVANVAGTAEKSFHVDVYVPPMIEGNLATPLNKQVVIAH 1657
Query: 190 -----CKAVAGKPAAHISWIPEG 207
CKA AG P+ ++W+ +G
Sbjct: 1658 SLTLECKA-AGNPSPILTWLKDG 1679
Score = 30.8 bits (68), Expect = 1.9
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 8/75 (10%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP-------EVTLFQNRNRTAVCKA 192
++I + H G Y C+ G+ HR L V P E+ + N C+A
Sbjct: 3952 IEILATQLNHAGRYTCVARNAAGSAHRHVTLHVHEPPVIQPQPSELHVILNNPILLPCEA 4011
Query: 193 VAGKPAAHISWIPEG 207
G P+ I+W EG
Sbjct: 4012 -TGTPSPFITWQKEG 4025
Score = 30.4 bits (67), Expect = 2.5
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 116 NETKETNCTDERITWVSRPDQ--NSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVL 173
N T + N D R+ +R N L++++V G Y C++ + G+ L V
Sbjct: 550 NLTWQRNDRDVRLAEPARIRTLANLSLELKSVKFNDAGEYHCMVSSEGGSSAASVFLTVQ 609
Query: 174 VTPEVTL------FQNRNRTAVCKAVAGKPAAHISW 203
P+VT+ F + ++ + G P I+W
Sbjct: 610 EPPKVTVMPKNQSFTGGSEVSIMCSATGYPKPKIAW 645
Score = 29.6 bits (65), Expect = 4.2
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRNRTAVC 190
L I +V +G Y C+ V G R Y+L+V V P V++ N+ C
Sbjct: 1323 LVIASVTPYDNGEYICVAVNEAGTTERKYNLKVHVPPVIKDKEQVTNVSVLLNQLTNLFC 1382
Query: 191 KAVAGKPAAHISW 203
+ V G P+ I W
Sbjct: 1383 E-VEGTPSPIIMW 1394
Score = 29.3 bits (64), Expect = 5.5
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 10/66 (15%)
Query: 151 GYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRNRTAVCKAVAGKPAAHI 201
G Y C + G + +++ VLV P EV++ NR+ C+ V G P I
Sbjct: 1427 GRYSCKAINIAGTSQKYFNIDVLVPPTIIGTNFPNEVSVVLNRDVALECQ-VKGTPFPDI 1485
Query: 202 SWIPEG 207
W +G
Sbjct: 1486 HWFKDG 1491
Score = 29.3 bits (64), Expect = 5.5
Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 14/139 (10%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVT--------LFQNRNRTAVCK 191
L+I + G Y C+ + G Y + VLV P + + N +
Sbjct: 1697 LEIMSAQEIDRGQYICVATSVAGEKEIKYEVDVLVPPAIEGGDETSYFIVMVNNLLELDC 1756
Query: 192 AVAGKPAAHISWIPEGDCATKQEYWS---NGTVTVKSTCHWEVHNVSTVTCHVSHLTGNK 248
V G P I W+ +G +++ + NG V + +V N C ++ G+
Sbjct: 1757 HVTGSPPPTIMWLKDGQLIDERDGFKILLNGRKLVIAQA--QVSNTGLYRCMAANTAGDH 1814
Query: 249 SLYIEL-LPVPGAKKSAKL 266
E+ + VP KS+ L
Sbjct: 1815 KKEFEVTVHVPPTIKSSGL 1833
Score = 29.3 bits (64), Expect = 5.5
Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 7/114 (6%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKAVA----- 194
L + + I+ G Y C+ V G R L+V V P + + + +AV
Sbjct: 2068 LALTSAQISDTGRYTCVAVNAAGEKQRDIDLRVYVPPNIMGEEQNVSVLISQAVELLCQS 2127
Query: 195 -GKPAAHISWIPEGDCATKQEYWS-NGTVTVKSTCHWEVHNVSTVTCHVSHLTG 246
P ++W+ +G K+ S + +V +V + TC +++ G
Sbjct: 2128 DAIPPPTLTWLKDGHPLLKKPGLSISENRSVLKIEDAQVQDTGRYTCEATNVAG 2181
Score = 29.3 bits (64), Expect = 5.5
Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 17/141 (12%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP-------EVTLFQNRNRTAVCKA 192
L I+ ++ G Y C + G + +HL V V P EV + N +
Sbjct: 3115 LHIKKAEVSDTGQYVCRAINVAGRDDKNFHLNVYVPPSIEGPEREVIVETISNPVTLTCD 3174
Query: 193 VAGKPAAHISWIP-----EGDCATKQEYWSNGT-VTVKSTCHWEVHNVSTVTCHVSHLTG 246
G P I+W+ E + + S G+ + + + H + N TC S++ G
Sbjct: 3175 ATGIPPPTIAWLKNHKRIENSDSLEVRILSGGSKLQIARSQHSDSGN---YTCIASNMEG 3231
Query: 247 NKSLYIEL-LPVPGAKKSAKL 266
Y L + VP + A++
Sbjct: 3232 KAQKYYFLSIQVPPSVAGAEI 3252
Score = 28.9 bits (63), Expect = 7.1
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 141 QIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRNRTAVCK 191
Q+ VA+ Y C+ G ++ Y+LQV P E+T+ + + + C
Sbjct: 3404 QVSDVAV-----YTCVASNRAGVDNKHYNLQVFAPPNMDNSMGTEEITVLKGSSTSMAC- 3457
Query: 192 AVAGKPAAHISWIPEG 207
G PA ++W+ +G
Sbjct: 3458 ITDGTPAPSMAWLRDG 3473
Score = 28.5 bits (62), Expect = 9.3
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 10/77 (12%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRNRTAVC 190
LQ+ G Y CI G + + L+VL P E+++ N C
Sbjct: 3491 LQLLKAETEDSGKYTCIASNEAGEVSKHFILKVLEPPHINGSEEHEEISVIVNNPLELTC 3550
Query: 191 KAVAGKPAAHISWIPEG 207
A +G PA ++W+ +G
Sbjct: 3551 IA-SGIPAPKMTWMKDG 3566
>gi|94420689 neural cell adhesion molecule 1 isoform 1 [Homo
sapiens]
Length = 848
Score = 40.8 bits (94), Expect = 0.002
Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 22/182 (12%)
Query: 103 GQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDG 162
G P T ++ K+ + ++ DE+ + D +S L I+ V + Y CI G
Sbjct: 239 GFPEPTMSWTKDGEQIEQEE-DDEKYIF---SDDSSQLTIKKVDKNDEAEYICIAENKAG 294
Query: 163 NFHRGYHLQVLVTPEVTLFQNRNR-------TAVCKAVAGKPAAHISWIPEGDCATKQEY 215
HL+V P++T +N+ T C+A +G P I+W + +E
Sbjct: 295 EQDATIHLKVFAKPKITYVENQTAMELEEQVTLTCEA-SGDPIPSITWRTSTRNISSEEK 353
Query: 216 WSNGTVTVKSTCHWEVHNVSTV--------TCHVSHLTG--NKSLYIELLPVPGAKKSAK 265
+G + V+S + ++ C S+ G ++S+Y+E+ P +
Sbjct: 354 TLDGHMVVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEVQYAPKLQGPVA 413
Query: 266 LY 267
+Y
Sbjct: 414 VY 415
Score = 32.7 bits (73), Expect = 0.49
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 137 NSDLQIRTVAITHDGYYRC---IMVTPDGNFHRGYHLQVLVTPEVTLFQN---------R 184
N+ LQIR + T +G YRC I+ + NF + + V V P + QN +
Sbjct: 171 NNYLQIRGIKKTDEGTYRCEGRILARGEINF-KDIQVIVNVPPTIQARQNIVNATANLGQ 229
Query: 185 NRTAVCKAVAGKPAAHISWIPEGDCATKQE 214
+ T VC A G P +SW +G+ ++E
Sbjct: 230 SVTLVCDA-EGFPEPTMSWTKDGEQIEQEE 258
Score = 32.3 bits (72), Expect = 0.65
Identities = 56/274 (20%), Positives = 95/274 (34%), Gaps = 37/274 (13%)
Query: 7 TANLGLLLILTIFLVAEAEGAAQPNNS-------LMLQTSKENHALASSSLCMDEKQITQ 59
TANLG ++ LV +AEG +P S + + E + + S + K++ +
Sbjct: 224 TANLGQ----SVTLVCDAEGFPEPTMSWTKDGEQIEQEEDDEKYIFSDDSSQLTIKKVDK 279
Query: 60 NYSK---VLAEVNTSWPVKMATNAVLCCPPIA---------LRNLIIITWEIILRGQPSC 107
N +AE V P I L + +T E G P
Sbjct: 280 NDEAEYICIAENKAGEQDATIHLKVFAKPKITYVENQTAMELEEQVTLTCEA--SGDPIP 337
Query: 108 TKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRG 167
+ ++ T T + V + S L ++++ T G Y C G +
Sbjct: 338 SITWRTSTRNISSEEKTLDGHMVVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQS 397
Query: 168 YHLQVLVTPE------VTLFQNRNRTAVCKAVAGKPAAHISWIPEGDCATKQEYWSNGTV 221
+L+V P+ V ++ C+ A P+A ISW +G Y +
Sbjct: 398 MYLEVQYAPKLQGPVAVYTWEGNQVNITCEVFA-YPSATISWFRDGQLLPSSNYSNIKIY 456
Query: 222 TVKSTCHWEV-----HNVSTVTCHVSHLTGNKSL 250
S + EV ++ C + G +SL
Sbjct: 457 NTPSASYLEVTPDSENDFGNYNCTAVNRIGQESL 490
>gi|115529478 neural cell adhesion molecule 1 isoform 3 [Homo
sapiens]
Length = 761
Score = 40.8 bits (94), Expect = 0.002
Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 22/182 (12%)
Query: 103 GQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDG 162
G P T ++ K+ + ++ DE+ + D +S L I+ V + Y CI G
Sbjct: 239 GFPEPTMSWTKDGEQIEQEE-DDEKYIF---SDDSSQLTIKKVDKNDEAEYICIAENKAG 294
Query: 163 NFHRGYHLQVLVTPEVTLFQNRNR-------TAVCKAVAGKPAAHISWIPEGDCATKQEY 215
HL+V P++T +N+ T C+A +G P I+W + +E
Sbjct: 295 EQDATIHLKVFAKPKITYVENQTAMELEEQVTLTCEA-SGDPIPSITWRTSTRNISSEEK 353
Query: 216 WSNGTVTVKSTCHWEVHNVSTV--------TCHVSHLTG--NKSLYIELLPVPGAKKSAK 265
+G + V+S + ++ C S+ G ++S+Y+E+ P +
Sbjct: 354 TLDGHMVVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQSMYLEVQYAPKLQGPVA 413
Query: 266 LY 267
+Y
Sbjct: 414 VY 415
Score = 32.7 bits (73), Expect = 0.49
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 137 NSDLQIRTVAITHDGYYRC---IMVTPDGNFHRGYHLQVLVTPEVTLFQN---------R 184
N+ LQIR + T +G YRC I+ + NF + + V V P + QN +
Sbjct: 171 NNYLQIRGIKKTDEGTYRCEGRILARGEINF-KDIQVIVNVPPTIQARQNIVNATANLGQ 229
Query: 185 NRTAVCKAVAGKPAAHISWIPEGDCATKQE 214
+ T VC A G P +SW +G+ ++E
Sbjct: 230 SVTLVCDA-EGFPEPTMSWTKDGEQIEQEE 258
Score = 32.3 bits (72), Expect = 0.65
Identities = 56/274 (20%), Positives = 95/274 (34%), Gaps = 37/274 (13%)
Query: 7 TANLGLLLILTIFLVAEAEGAAQPNNS-------LMLQTSKENHALASSSLCMDEKQITQ 59
TANLG ++ LV +AEG +P S + + E + + S + K++ +
Sbjct: 224 TANLGQ----SVTLVCDAEGFPEPTMSWTKDGEQIEQEEDDEKYIFSDDSSQLTIKKVDK 279
Query: 60 NYSK---VLAEVNTSWPVKMATNAVLCCPPIA---------LRNLIIITWEIILRGQPSC 107
N +AE V P I L + +T E G P
Sbjct: 280 NDEAEYICIAENKAGEQDATIHLKVFAKPKITYVENQTAMELEEQVTLTCEA--SGDPIP 337
Query: 108 TKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRG 167
+ ++ T T + V + S L ++++ T G Y C G +
Sbjct: 338 SITWRTSTRNISSEEKTLDGHMVVRSHARVSSLTLKSIQYTDAGEYICTASNTIGQDSQS 397
Query: 168 YHLQVLVTPE------VTLFQNRNRTAVCKAVAGKPAAHISWIPEGDCATKQEYWSNGTV 221
+L+V P+ V ++ C+ A P+A ISW +G Y +
Sbjct: 398 MYLEVQYAPKLQGPVAVYTWEGNQVNITCEVFA-YPSATISWFRDGQLLPSSNYSNIKIY 456
Query: 222 TVKSTCHWEV-----HNVSTVTCHVSHLTGNKSL 250
S + EV ++ C + G +SL
Sbjct: 457 NTPSASYLEVTPDSENDFGNYNCTAVNRIGQESL 490
>gi|66346706 neuronal growth regulator 1 [Homo sapiens]
Length = 354
Score = 40.0 bits (92), Expect = 0.003
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 125 DERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEV------ 178
D R++ + ++ LQI+ V +T DG Y C + T HL V V P++
Sbjct: 88 DPRVSISTLNKRDYSLQIQNVDVTDDGPYTCSVQTQHTPRTMQVHLTVQVPPKIYDISND 147
Query: 179 -TLFQNRNRTAVCKAVAGKPAAHISW 203
T+ + N T C A GKP ISW
Sbjct: 148 MTVNEGTNVTLTCLA-TGKPEPSISW 172
>gi|54607118 leucine-rich repeats and immunoglobulin-like domains 1
[Homo sapiens]
Length = 1093
Score = 39.7 bits (91), Expect = 0.004
Identities = 48/210 (22%), Positives = 78/210 (37%), Gaps = 24/210 (11%)
Query: 142 IRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKAVA------G 195
I V I G Y C G+ L VL TP + + +V + VA G
Sbjct: 659 ITDVKIDDAGVYSCTAQNSAGSISANATLTVLETPSLVVPLEDRVVSVGETVALQCKATG 718
Query: 196 KPAAHISWIPEGD---CATKQEYWS--NGTVTVKSTCHWEVHNVSTVTCHVSHLTGNKSL 250
P I+W +GD T++ + + N + V++ + TC +S+ G +
Sbjct: 719 NPPPRITWF-KGDRPLSLTERHHLTPDNQLLVVQNVV---AEDAGRYTCEMSNTLGTERA 774
Query: 251 YIEL--LPVPGAKKSAKLYIPYIILTIIILTIVGFIWLLKVNGCRKYKLNKTESTPVVEE 308
+ +L LP G +K + I + + + +W+ + RK K+E V
Sbjct: 775 HSQLSVLPAAGCRKDGTTVGIFTIAVVSSIVLTSLVWVCIIYQTRK----KSEEYSVTNT 830
Query: 309 DEM---QPYASYTEKNNPLYDTTNKVKASE 335
DE SY L D V +E
Sbjct: 831 DETVVPPDVPSYLSSQGTLSDRQETVVRTE 860
Score = 29.3 bits (64), Expect = 5.5
Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 16/113 (14%)
Query: 108 TKAYKKETNETKETNCTDERITWVSRPD-----QNSDLQIRTVAITHDGYYRCIMVTPDG 162
T A+KK+ NE TN E V D + L +R V H+G Y+C++ G
Sbjct: 527 TFAWKKD-NEVL-TNADMENFVHVHAQDGEVMEYTTILHLRQVTFGHEGRYQCVITNHFG 584
Query: 163 N-FHRGYHLQVLVTP-------EVTLFQNRNRTAVCKAVAGKPAAHISWIPEG 207
+ + L V V P ++T+ C A G P I+W +G
Sbjct: 585 STYSHKARLTVNVLPSFTKTPHDITIRTTTMARLEC-AATGHPNPQIAWQKDG 636
>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3874
Score = 38.5 bits (88), Expect = 0.009
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 10/95 (10%)
Query: 135 DQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRN 185
+Q LQ+ V G Y C+ V+ G R + L V+ P E++L
Sbjct: 2262 EQGPSLQLEAVGAGDSGTYSCVAVSEAGEARRHFQLTVMEPPHIEDSGQPTELSLTPGAP 2321
Query: 186 RTAVCKAVAGKPAAHISWIPEGDCATKQEYWSNGT 220
+C A G P +I+W +G T+ E S T
Sbjct: 2322 MELLCDA-QGTPQPNITWHKDGQALTRLENNSRAT 2355
Score = 37.4 bits (85), Expect = 0.020
Identities = 37/172 (21%), Positives = 67/172 (38%), Gaps = 22/172 (12%)
Query: 95 ITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYR 154
+ E + RG PS T ++ E E+N + R+ S L++ + G Y
Sbjct: 423 VALECVARGHPSPTLSWHHEGLPVAESN--ESRLE-----TDGSVLRLESPGEASSGLYS 475
Query: 155 CIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAV---------CKAVAGKPAAHISWIP 205
C+ +P G Y ++V V P++ + + + C+A +G P I W+
Sbjct: 476 CVASSPAGEAVLQYSVEVQVPPQLLVAEGLGQVTTIVGQPLELPCQA-SGSPVPTIQWLQ 534
Query: 206 EGDCATK---QEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTGNKSLYIEL 254
G A + + S GT H E+ + C ++ G +E+
Sbjct: 535 NGRPAEELAGVQVASQGTTL--HIDHVELDHSGLFACQATNEAGTAGAEVEV 584
Score = 37.0 bits (84), Expect = 0.026
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 18/143 (12%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP------------EVTLFQNRNRT 187
LQ+ ++ G+Y CI G + + L VL+ P EVT+ N +
Sbjct: 1310 LQVLQANLSSAGHYSCIAANAVGEKTKHFQLSVLLAPTILGGAEDSADEEVTVTVNNPIS 1369
Query: 188 AVCKAVAGKPAAHISWIPEGDC--ATKQEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLT 245
+C+A+A P+ +I+W+ +G A++ GT ++ + + + TC V++
Sbjct: 1370 LICEALA-FPSPNITWMKDGAPFEASRNIQLLPGTHGLQ-ILNAQKEDAGQYTCVVTNEL 1427
Query: 246 GN--KSLYIELLPVPGAKKSAKL 266
G K+ ++E+L P K L
Sbjct: 1428 GEAVKNYHVEVLIPPSISKDDPL 1450
Score = 34.3 bits (77), Expect = 0.17
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 15/122 (12%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEV-------TLFQNRNRTAVCKA 192
LQI V + +G Y C G R L+VLV P + + +N + T C A
Sbjct: 659 LQIEKVDLRDEGIYTCAATNLAGESKREVALKVLVPPNIEPGPVNKAVLENASVTLECLA 718
Query: 193 VAGKPAAHISWIPEGDCATKQEYWSNGTVTVKSTC----HWEVHNVSTVTCHVSHLTGNK 248
+G P +SW + W TV+V ++ + + C S++ G+
Sbjct: 719 -SGVPPPDVSWFKGHQPVSS---WMGVTVSVDGRVLRIEQAQLSDAGSYRCVASNVAGST 774
Query: 249 SL 250
L
Sbjct: 775 EL 776
Score = 34.3 bits (77), Expect = 0.17
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKA------- 192
L+I V + G + C+ +P G R + LQV V P + + +N V +
Sbjct: 2178 LRISKVQLADAGIFTCVAASPAGVADRNFTLQVQVPPVLEPVEFQNDVVVVRGSLVELPC 2237
Query: 193 -VAGKPAAHISWIPEGD 208
G P +SW+ +G+
Sbjct: 2238 EARGVPLPLVSWMKDGE 2254
Score = 33.5 bits (75), Expect = 0.29
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKA------- 192
L ++ + + G Y C+ P G R + + VLV P + + + T V +
Sbjct: 2084 LVLKGLRASDAGAYTCVAHNPAGEDARLHTVNVLVPPTIKQGADGSGTLVSRPGELVTMV 2143
Query: 193 --VAGKPAAHISWIPEG 207
V G P H+SW+ +G
Sbjct: 2144 CPVRGSPPIHVSWLKDG 2160
Score = 33.1 bits (74), Expect = 0.38
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 13/92 (14%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRNRTAVC 190
L+I + +G Y+C+ +P G R + L+V P EV + ++ +C
Sbjct: 274 LRITGSHVGDEGRYQCVAFSPAGQQARDFQLRVHAPPTIWGSNETGEVAVMEDHLVQLLC 333
Query: 191 KAVAGKPAAHISWIPEG---DCATKQEYWSNG 219
+A G P +I+W +G +TK Y G
Sbjct: 334 EA-RGVPTPNITWFKDGALLPTSTKVVYTRGG 364
Score = 33.1 bits (74), Expect = 0.38
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
Query: 135 DQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPE----------VTLFQNR 184
+Q L + H G Y C+ G R + L VLV PE +T +
Sbjct: 1118 NQGQSLHVERAQAAHTGRYSCVAENLAGRAERKFELSVLVPPELIGDLDPLTNITAALHS 1177
Query: 185 NRTAVCKAVAGKPAAHISW 203
T +C+A+ G P I W
Sbjct: 1178 PLTLLCEAM-GIPPPAIRW 1195
Score = 32.7 bits (73), Expect = 0.49
Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 14/127 (11%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNR-------NRTAVCKA 192
LQ+ + G+Y C + G + Y+L V V P L ++ + T++
Sbjct: 935 LQVDRADVWDAGHYTCEALNQAGRSEKHYNLNVWVAPVFPLRESHTLTVREGHPTSLSCE 994
Query: 193 VAGKPAAHISWIPE-----GDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTGN 247
G P ISW + G+ A Q + G + ++ T TC S++ GN
Sbjct: 995 CRGVPFPKISWRKDGQPLPGEGAGLQHVSAVGRLLYLGQA--QLAQEGTYTCECSNVVGN 1052
Query: 248 KSLYIEL 254
S ++L
Sbjct: 1053 SSQDLQL 1059
Score = 32.3 bits (72), Expect = 0.65
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTL--------FQNRNRTAVCK 191
L+I ++ G YRC+ G+ Y L+V V P +TL N C
Sbjct: 750 LRIEQAQLSDAGSYRCVASNVAGSTELRYGLRVNVPPRITLPPSLPGPVLVNTPVRLTCN 809
Query: 192 AVAGKPAAHISWIPEGD 208
A G P+ + W+ +G+
Sbjct: 810 A-TGAPSPTLMWLKDGN 825
Score = 30.0 bits (66), Expect = 3.2
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 151 GYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKAVAGKPAAHISWIPEGDCA 210
G Y C+ G R + ++VLV P + +N + V K + G+ AH+ G
Sbjct: 1228 GLYSCLASNEAGEARRNFSVEVLVPPSI---ENEDLEEVIKVLDGQ-TAHLMCNVTGHPQ 1283
Query: 211 TKQEYWSNGTVTVKSTCH 228
K ++ +G + H
Sbjct: 1284 PKLTWFKDGRPLARGDAH 1301
Score = 30.0 bits (66), Expect = 3.2
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 15/86 (17%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP--------------EVTLFQNRN 185
LQI G Y C++ G + YH++VL+ P EV N
Sbjct: 1406 LQILNAQKEDAGQYTCVVTNELGEAVKNYHVEVLIPPSISKDDPLGEVGVKEVKTKVNST 1465
Query: 186 RTAVCKAVAGKPAAHISWIPEGDCAT 211
T C++ A P I W +G T
Sbjct: 1466 LTLECESWAVPPPT-IRWYKDGQPVT 1490
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 38.5 bits (88), Expect = 0.009
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 10/95 (10%)
Query: 135 DQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRN 185
+Q LQ+ V G Y C+ V+ G R + L V+ P E++L
Sbjct: 3453 EQGPSLQLEAVGAGDSGTYSCVAVSEAGEARRHFQLTVMEPPHIEDSGQPTELSLTPGAP 3512
Query: 186 RTAVCKAVAGKPAAHISWIPEGDCATKQEYWSNGT 220
+C A G P +I+W +G T+ E S T
Sbjct: 3513 MELLCDA-QGTPQPNITWHKDGQALTRLENNSRAT 3546
Score = 37.4 bits (85), Expect = 0.020
Identities = 37/172 (21%), Positives = 67/172 (38%), Gaps = 22/172 (12%)
Query: 95 ITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYR 154
+ E + RG PS T ++ E E+N + R+ S L++ + G Y
Sbjct: 1614 VALECVARGHPSPTLSWHHEGLPVAESN--ESRLE-----TDGSVLRLESPGEASSGLYS 1666
Query: 155 CIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAV---------CKAVAGKPAAHISWIP 205
C+ +P G Y ++V V P++ + + + C+A +G P I W+
Sbjct: 1667 CVASSPAGEAVLQYSVEVQVPPQLLVAEGLGQVTTIVGQPLELPCQA-SGSPVPTIQWLQ 1725
Query: 206 EGDCATK---QEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTGNKSLYIEL 254
G A + + S GT H E+ + C ++ G +E+
Sbjct: 1726 NGRPAEELAGVQVASQGTTL--HIDHVELDHSGLFACQATNEAGTAGAEVEV 1775
Score = 37.0 bits (84), Expect = 0.026
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 18/143 (12%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP------------EVTLFQNRNRT 187
LQ+ ++ G+Y CI G + + L VL+ P EVT+ N +
Sbjct: 2501 LQVLQANLSSAGHYSCIAANAVGEKTKHFQLSVLLAPTILGGAEDSADEEVTVTVNNPIS 2560
Query: 188 AVCKAVAGKPAAHISWIPEGDC--ATKQEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLT 245
+C+A+A P+ +I+W+ +G A++ GT ++ + + + TC V++
Sbjct: 2561 LICEALA-FPSPNITWMKDGAPFEASRNIQLLPGTHGLQ-ILNAQKEDAGQYTCVVTNEL 2618
Query: 246 GN--KSLYIELLPVPGAKKSAKL 266
G K+ ++E+L P K L
Sbjct: 2619 GEAVKNYHVEVLIPPSISKDDPL 2641
Score = 34.3 bits (77), Expect = 0.17
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 15/122 (12%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEV-------TLFQNRNRTAVCKA 192
LQI V + +G Y C G R L+VLV P + + +N + T C A
Sbjct: 1850 LQIEKVDLRDEGIYTCAATNLAGESKREVALKVLVPPNIEPGPVNKAVLENASVTLECLA 1909
Query: 193 VAGKPAAHISWIPEGDCATKQEYWSNGTVTVKSTC----HWEVHNVSTVTCHVSHLTGNK 248
+G P +SW + W TV+V ++ + + C S++ G+
Sbjct: 1910 -SGVPPPDVSWFKGHQPVSS---WMGVTVSVDGRVLRIEQAQLSDAGSYRCVASNVAGST 1965
Query: 249 SL 250
L
Sbjct: 1966 EL 1967
Score = 34.3 bits (77), Expect = 0.17
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKA------- 192
L+I V + G + C+ +P G R + LQV V P + + +N V +
Sbjct: 3369 LRISKVQLADAGIFTCVAASPAGVADRNFTLQVQVPPVLEPVEFQNDVVVVRGSLVELPC 3428
Query: 193 -VAGKPAAHISWIPEGD 208
G P +SW+ +G+
Sbjct: 3429 EARGVPLPLVSWMKDGE 3445
Score = 33.5 bits (75), Expect = 0.29
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKA------- 192
L ++ + + G Y C+ P G R + + VLV P + + + T V +
Sbjct: 3275 LVLKGLRASDAGAYTCVAHNPAGEDARLHTVNVLVPPTIKQGADGSGTLVSRPGELVTMV 3334
Query: 193 --VAGKPAAHISWIPEG 207
V G P H+SW+ +G
Sbjct: 3335 CPVRGSPPIHVSWLKDG 3351
Score = 33.1 bits (74), Expect = 0.38
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 13/92 (14%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRNRTAVC 190
L+I + +G Y+C+ +P G R + L+V P EV + ++ +C
Sbjct: 1465 LRITGSHVGDEGRYQCVAFSPAGQQARDFQLRVHAPPTIWGSNETGEVAVMEDHLVQLLC 1524
Query: 191 KAVAGKPAAHISWIPEG---DCATKQEYWSNG 219
+A G P +I+W +G +TK Y G
Sbjct: 1525 EA-RGVPTPNITWFKDGALLPTSTKVVYTRGG 1555
Score = 33.1 bits (74), Expect = 0.38
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 14/127 (11%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNR-------NRTAVCKA 192
LQ+ + G+Y C + G+ + Y+L V V P L ++ + T++
Sbjct: 2126 LQVDRADVWDAGHYTCEALNQAGHSEKHYNLNVWVAPVFPLRESHTLTVREGHPTSLSCE 2185
Query: 193 VAGKPAAHISWIPE-----GDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTGN 247
G P ISW + G+ A Q + G + ++ T TC S++ GN
Sbjct: 2186 CRGVPFPKISWRKDGQPLPGEGAGLQHVSAVGRLLYLGQA--QLAQEGTYTCECSNVVGN 2243
Query: 248 KSLYIEL 254
S ++L
Sbjct: 2244 SSQDLQL 2250
Score = 33.1 bits (74), Expect = 0.38
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
Query: 135 DQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPE----------VTLFQNR 184
+Q L + H G Y C+ G R + L VLV PE +T +
Sbjct: 2309 NQGQSLHVERAQAAHTGRYSCVAENLAGRAERKFELSVLVPPELIGDLDPLTNITAALHS 2368
Query: 185 NRTAVCKAVAGKPAAHISW 203
T +C+A+ G P I W
Sbjct: 2369 PLTLLCEAM-GIPPPAIRW 2386
Score = 32.3 bits (72), Expect = 0.65
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTL--------FQNRNRTAVCK 191
L+I ++ G YRC+ G+ Y L+V V P +TL N C
Sbjct: 1941 LRIEQAQLSDAGSYRCVASNVAGSTELRYGLRVNVPPRITLPPSLPGPVLVNTPVRLTCN 2000
Query: 192 AVAGKPAAHISWIPEGD 208
A G P+ + W+ +G+
Sbjct: 2001 A-TGAPSPTLMWLKDGN 2016
Score = 31.2 bits (69), Expect = 1.4
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 6/77 (7%)
Query: 137 NSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKAV--- 193
+ L++ V + G+Y C P G+ Y L V V P+V + V +A+
Sbjct: 1081 SGSLRLAQVQVGDSGHYECTASNPAGSASHRYVLGVQVPPQVQPGPRVLKVLVGEALDLN 1140
Query: 194 ---AGKPAAHISWIPEG 207
G P +SW +G
Sbjct: 1141 CVAEGNPEPQLSWSKDG 1157
Score = 30.8 bits (68), Expect = 1.9
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTL------FQNRNRTAVCKAV 193
L+I + T G Y+C+ +G L V P+V++ F V +
Sbjct: 572 LEISGIIPTDGGRYQCVASNANGVTRASVWLLVREAPQVSIHTSSQHFSQGVEVKVSCSA 631
Query: 194 AGKPAAHISWIPE 206
+G P HISW E
Sbjct: 632 SGYPTPHISWSRE 644
Score = 30.4 bits (67), Expect = 2.5
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 6/71 (8%)
Query: 149 HDGYYRCIMVTPDGNFHRGYHLQVLVTPEV-----TLFQNRNRTAVCKAVA-GKPAAHIS 202
H G Y C+ G+ HR L V V P + N A VA G PA I+
Sbjct: 949 HAGRYSCVATNTAGSQHRDVELVVQVPPRIHPTATHHITNEGVPASLPCVASGVPAPTIT 1008
Query: 203 WIPEGDCATKQ 213
W E + T +
Sbjct: 1009 WTKETNALTSR 1019
Score = 30.0 bits (66), Expect = 3.2
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 151 GYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKAVAGKPAAHISWIPEGDCA 210
G Y C+ G R + ++VLV P + +N + V K + G+ AH+ G
Sbjct: 2419 GLYSCLASNEAGEARRNFSVEVLVPPSI---ENEDLEEVIKVLDGQ-TAHLMCNVTGHPQ 2474
Query: 211 TKQEYWSNGTVTVKSTCH 228
K ++ +G + H
Sbjct: 2475 PKLTWFKDGRPLARGDAH 2492
Score = 30.0 bits (66), Expect = 3.2
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 15/86 (17%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP--------------EVTLFQNRN 185
LQI G Y C++ G + YH++VL+ P EV N
Sbjct: 2597 LQILNAQKEDAGQYTCVVTNELGEAVKNYHVEVLIPPSISKDDPLGEVGVKEVKTKVNST 2656
Query: 186 RTAVCKAVAGKPAAHISWIPEGDCAT 211
T C++ A P I W +G T
Sbjct: 2657 LTLECESWAVPPPT-IRWYKDGQPVT 2681
>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3783
Score = 38.5 bits (88), Expect = 0.009
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 10/95 (10%)
Query: 135 DQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRN 185
+Q LQ+ V G Y C+ V+ G R + L V+ P E++L
Sbjct: 2171 EQGPSLQLEAVGAGDSGTYSCVAVSEAGEARRHFQLTVMEPPHIEDSGQPTELSLTPGAP 2230
Query: 186 RTAVCKAVAGKPAAHISWIPEGDCATKQEYWSNGT 220
+C A G P +I+W +G T+ E S T
Sbjct: 2231 MELLCDA-QGTPQPNITWHKDGQALTRLENNSRAT 2264
Score = 37.4 bits (85), Expect = 0.020
Identities = 37/172 (21%), Positives = 67/172 (38%), Gaps = 22/172 (12%)
Query: 95 ITWEIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYR 154
+ E + RG PS T ++ E E+N + R+ S L++ + G Y
Sbjct: 332 VALECVARGHPSPTLSWHHEGLPVAESN--ESRLE-----TDGSVLRLESPGEASSGLYS 384
Query: 155 CIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAV---------CKAVAGKPAAHISWIP 205
C+ +P G Y ++V V P++ + + + C+A +G P I W+
Sbjct: 385 CVASSPAGEAVLQYSVEVQVPPQLLVAEGLGQVTTIVGQPLELPCQA-SGSPVPTIQWLQ 443
Query: 206 EGDCATK---QEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTGNKSLYIEL 254
G A + + S GT H E+ + C ++ G +E+
Sbjct: 444 NGRPAEELAGVQVASQGTTL--HIDHVELDHSGLFACQATNEAGTAGAEVEV 493
Score = 37.0 bits (84), Expect = 0.026
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 18/143 (12%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP------------EVTLFQNRNRT 187
LQ+ ++ G+Y CI G + + L VL+ P EVT+ N +
Sbjct: 1219 LQVLQANLSSAGHYSCIAANAVGEKTKHFQLSVLLAPTILGGAEDSADEEVTVTVNNPIS 1278
Query: 188 AVCKAVAGKPAAHISWIPEGDC--ATKQEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLT 245
+C+A+A P+ +I+W+ +G A++ GT ++ + + + TC V++
Sbjct: 1279 LICEALA-FPSPNITWMKDGAPFEASRNIQLLPGTHGLQ-ILNAQKEDAGQYTCVVTNEL 1336
Query: 246 GN--KSLYIELLPVPGAKKSAKL 266
G K+ ++E+L P K L
Sbjct: 1337 GEAVKNYHVEVLIPPSISKDDPL 1359
Score = 34.3 bits (77), Expect = 0.17
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 15/122 (12%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEV-------TLFQNRNRTAVCKA 192
LQI V + +G Y C G R L+VLV P + + +N + T C A
Sbjct: 568 LQIEKVDLRDEGIYTCAATNLAGESKREVALKVLVPPNIEPGPVNKAVLENASVTLECLA 627
Query: 193 VAGKPAAHISWIPEGDCATKQEYWSNGTVTVKSTC----HWEVHNVSTVTCHVSHLTGNK 248
+G P +SW + W TV+V ++ + + C S++ G+
Sbjct: 628 -SGVPPPDVSWFKGHQPVSS---WMGVTVSVDGRVLRIEQAQLSDAGSYRCVASNVAGST 683
Query: 249 SL 250
L
Sbjct: 684 EL 685
Score = 34.3 bits (77), Expect = 0.17
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKA------- 192
L+I V + G + C+ +P G R + LQV V P + + +N V +
Sbjct: 2087 LRISKVQLADAGIFTCVAASPAGVADRNFTLQVQVPPVLEPVEFQNDVVVVRGSLVELPC 2146
Query: 193 -VAGKPAAHISWIPEGD 208
G P +SW+ +G+
Sbjct: 2147 EARGVPLPLVSWMKDGE 2163
Score = 33.5 bits (75), Expect = 0.29
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKA------- 192
L ++ + + G Y C+ P G R + + VLV P + + + T V +
Sbjct: 1993 LVLKGLRASDAGAYTCVAHNPAGEDARLHTVNVLVPPTIKQGADGSGTLVSRPGELVTMV 2052
Query: 193 --VAGKPAAHISWIPEG 207
V G P H+SW+ +G
Sbjct: 2053 CPVRGSPPIHVSWLKDG 2069
Score = 33.1 bits (74), Expect = 0.38
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 13/92 (14%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP---------EVTLFQNRNRTAVC 190
L+I + +G Y+C+ +P G R + L+V P EV + ++ +C
Sbjct: 183 LRITGSHVGDEGRYQCVAFSPAGQQARDFQLRVHAPPTIWGSNETGEVAVMEDHLVQLLC 242
Query: 191 KAVAGKPAAHISWIPEG---DCATKQEYWSNG 219
+A G P +I+W +G +TK Y G
Sbjct: 243 EA-RGVPTPNITWFKDGALLPTSTKVVYTRGG 273
Score = 33.1 bits (74), Expect = 0.38
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
Query: 135 DQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPE----------VTLFQNR 184
+Q L + H G Y C+ G R + L VLV PE +T +
Sbjct: 1027 NQGQSLHVERAQAAHTGRYSCVAENLAGRAERKFELSVLVPPELIGDLDPLTNITAALHS 1086
Query: 185 NRTAVCKAVAGKPAAHISW 203
T +C+A+ G P I W
Sbjct: 1087 PLTLLCEAM-GIPPPAIRW 1104
Score = 32.3 bits (72), Expect = 0.65
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTL--------FQNRNRTAVCK 191
L+I ++ G YRC+ G+ Y L+V V P +TL N C
Sbjct: 659 LRIEQAQLSDAGSYRCVASNVAGSTELRYGLRVNVPPRITLPPSLPGPVLVNTPVRLTCN 718
Query: 192 AVAGKPAAHISWIPEGD 208
A G P+ + W+ +G+
Sbjct: 719 A-TGAPSPTLMWLKDGN 734
Score = 32.3 bits (72), Expect = 0.65
Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 14/127 (11%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNR-------NRTAVCKA 192
LQ+ + G+Y C + G+ + Y+L V V P L ++ + T +
Sbjct: 844 LQVDRADVWDAGHYTCEALNQAGHSEKHYNLNVWVAPVFPLRESHTLTVREGHPTRLSCE 903
Query: 193 VAGKPAAHISWIPE-----GDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCHVSHLTGN 247
G P ISW + G+ A Q + G + ++ T TC S++ GN
Sbjct: 904 CRGVPFPKISWRKDGQPLPGEGAGLQHVSAVGRLLYLGQA--QLAQEGTYTCECSNVVGN 961
Query: 248 KSLYIEL 254
S ++L
Sbjct: 962 SSQDLQL 968
Score = 30.0 bits (66), Expect = 3.2
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 151 GYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNRNRTAVCKAVAGKPAAHISWIPEGDCA 210
G Y C+ G R + ++VLV P + +N + V K + G+ AH+ G
Sbjct: 1137 GLYSCLASNEAGEARRNFSVEVLVPPSI---ENEDLEEVIKVLDGQ-TAHLMCNVTGHPQ 1192
Query: 211 TKQEYWSNGTVTVKSTCH 228
K ++ +G + H
Sbjct: 1193 PKLTWFKDGRPLARGDAH 1210
Score = 30.0 bits (66), Expect = 3.2
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 15/86 (17%)
Query: 140 LQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTP--------------EVTLFQNRN 185
LQI G Y C++ G + YH++VL+ P EV N
Sbjct: 1315 LQILNAQKEDAGQYTCVVTNELGEAVKNYHVEVLIPPSISKDDPLAEVGVKEVKTKVNST 1374
Query: 186 RTAVCKAVAGKPAAHISWIPEGDCAT 211
T C++ A P I W +G T
Sbjct: 1375 LTLECESWAVPPPT-IRWYKDGQPVT 1399
>gi|148664211 immunoglobulin superfamily, member 4D isoform 2 [Homo
sapiens]
Length = 414
Score = 37.0 bits (84), Expect = 0.026
Identities = 40/139 (28%), Positives = 57/139 (41%), Gaps = 18/139 (12%)
Query: 125 DERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNR 184
D R ++ + + V+I+ +G Y C + T D + VLV P + +
Sbjct: 94 DSRFQLLNFSSSELKVSLTNVSISDEGRYFCQLYT-DPPQESYTTITVLVPPRNLMIDIQ 152
Query: 185 NRTAV--------CKAVAGKPAAHISWI---PEGDCATKQEYWSNGTVTVKSTCHWEVHN 233
TAV C A+A KPA I W E ++ E WS+ TV S +VH
Sbjct: 153 KDTAVEGEEIEVNCTAMASKPATTIRWFKGNTELKGKSEVEEWSD-MYTVTSQLMLKVHK 211
Query: 234 VS---TVTCHVSH--LTGN 247
V C V H +TGN
Sbjct: 212 EDDGVPVICQVEHPAVTGN 230
>gi|148664190 immunoglobulin superfamily, member 4D isoform 1 [Homo
sapiens]
Length = 442
Score = 37.0 bits (84), Expect = 0.026
Identities = 40/139 (28%), Positives = 57/139 (41%), Gaps = 18/139 (12%)
Query: 125 DERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEVTLFQNR 184
D R ++ + + V+I+ +G Y C + T D + VLV P + +
Sbjct: 94 DSRFQLLNFSSSELKVSLTNVSISDEGRYFCQLYT-DPPQESYTTITVLVPPRNLMIDIQ 152
Query: 185 NRTAV--------CKAVAGKPAAHISWI---PEGDCATKQEYWSNGTVTVKSTCHWEVHN 233
TAV C A+A KPA I W E ++ E WS+ TV S +VH
Sbjct: 153 KDTAVEGEEIEVNCTAMASKPATTIRWFKGNTELKGKSEVEEWSD-MYTVTSQLMLKVHK 211
Query: 234 VS---TVTCHVSH--LTGN 247
V C V H +TGN
Sbjct: 212 EDDGVPVICQVEHPAVTGN 230
>gi|42560233 poliovirus receptor-related 1 isoform 3 [Homo sapiens]
Length = 352
Score = 37.0 bits (84), Expect = 0.026
Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 19/179 (10%)
Query: 65 LAEVNTSWPVKMATNAVLCCP---PIALRNLIIITWEIILRGQPSCTKAYKKETNETKET 121
+ +VN S + T+ VL C P+ + +TW+ G Y +
Sbjct: 32 VVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLA 91
Query: 122 NCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVT-PDGNFHRGYHLQVLVTP---- 176
ER+ ++ + +++ + + +G Y C T P GN +L V+ P
Sbjct: 92 PYR-ERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWI 150
Query: 177 ---EVTLFQNRNR-----TAVCKAVAGKPAAHISWIP--EGDCATKQEYWSNGTVTVKS 225
+ L + + A C + GKP + +SW +G+ ++ NGTVTV S
Sbjct: 151 EGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVIS 209
>gi|42560231 poliovirus receptor-related 1 isoform 2 [Homo sapiens]
Length = 458
Score = 37.0 bits (84), Expect = 0.026
Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 19/179 (10%)
Query: 65 LAEVNTSWPVKMATNAVLCCP---PIALRNLIIITWEIILRGQPSCTKAYKKETNETKET 121
+ +VN S + T+ VL C P+ + +TW+ G Y +
Sbjct: 32 VVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLA 91
Query: 122 NCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVT-PDGNFHRGYHLQVLVTP---- 176
ER+ ++ + +++ + + +G Y C T P GN +L V+ P
Sbjct: 92 PYR-ERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWI 150
Query: 177 ---EVTLFQNRNR-----TAVCKAVAGKPAAHISWIP--EGDCATKQEYWSNGTVTVKS 225
+ L + + A C + GKP + +SW +G+ ++ NGTVTV S
Sbjct: 151 EGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVIS 209
>gi|42560237 poliovirus receptor-related 1 isoform 1 [Homo sapiens]
Length = 517
Score = 37.0 bits (84), Expect = 0.026
Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 19/179 (10%)
Query: 65 LAEVNTSWPVKMATNAVLCCP---PIALRNLIIITWEIILRGQPSCTKAYKKETNETKET 121
+ +VN S + T+ VL C P+ + +TW+ G Y +
Sbjct: 32 VVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLA 91
Query: 122 NCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVT-PDGNFHRGYHLQVLVTP---- 176
ER+ ++ + +++ + + +G Y C T P GN +L V+ P
Sbjct: 92 PYR-ERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWI 150
Query: 177 ---EVTLFQNRNR-----TAVCKAVAGKPAAHISWIP--EGDCATKQEYWSNGTVTVKS 225
+ L + + A C + GKP + +SW +G+ ++ NGTVTV S
Sbjct: 151 EGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVIS 209
>gi|33519481 neural cell adhesion molecule 2 precursor [Homo
sapiens]
Length = 837
Score = 37.0 bits (84), Expect = 0.026
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 19/149 (12%)
Query: 137 NSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQVLVTPEV------TLFQNRNRTAVC 190
N++L +R + + G Y C G + LQV V P + T ++N T VC
Sbjct: 263 NTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVC 322
Query: 191 KAVAGKPAAHISW--IPEGDCATKQEYWSNGTVTVK-----STCH---WEVHNVSTVTCH 240
A G+P I+W +G T+ + +G + VK S+ H ++ + C
Sbjct: 323 DA-EGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCE 381
Query: 241 VSHLTG--NKSLYIELLPVPGAKKSAKLY 267
+ G KS+Y+++ P + +Y
Sbjct: 382 AASRIGGHQKSMYLDIEYAPKFISNQTIY 410
Score = 30.4 bits (67), Expect = 2.5
Identities = 36/143 (25%), Positives = 59/143 (41%), Gaps = 20/143 (13%)
Query: 98 EIILRGQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCI- 156
E++ R S A + + T +D R ++ N++LQI + + +G YRC
Sbjct: 133 EVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA----NNNLQILNINKSDEGIYRCEG 188
Query: 157 MVTPDGNF-HRGYHLQVLVTPEVTLFQ---------NRNRTAVCKAVAGKPAAHISWIPE 206
V G R + V V P +++ Q T C+A +G P ISW
Sbjct: 189 RVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRA-SGSPEPAISWFRN 247
Query: 207 GDCATKQEYW----SNGTVTVKS 225
G + E + SN +TV++
Sbjct: 248 GKLIEENEKYILKGSNTELTVRN 270
>gi|221316760 L1 cell adhesion molecule isoform 3 precursor [Homo
sapiens]
Length = 1248
Score = 36.6 bits (83), Expect = 0.034
Identities = 43/206 (20%), Positives = 73/206 (35%), Gaps = 30/206 (14%)
Query: 131 VSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQV------LVTPEVTLFQNR 184
V+ + N LQ+ V DG YRC+ G+ Y++ V L P+ L+
Sbjct: 283 VTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHKPQSHLYGPG 342
Query: 185 NRTAVCKAVAGKPAAHISW----IPEGDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCH 240
+ V G+P ++W IP + A Q+Y + S V+
Sbjct: 343 ETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEAR 402
Query: 241 VSH--LTGNKSLYIELLPVPGAKKSAKLYI------PYIILTIIILTIVGFIWLLKVNGC 292
H L N +Y+ LP + Y+ Y++ + WL
Sbjct: 403 NRHGLLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL------ 456
Query: 293 RKYKLNKTESTPVVEEDEMQPYASYT 318
+ T V++++ PYA+ T
Sbjct: 457 ------DEDGTTVLQDERFFPYANGT 476
>gi|13435353 L1 cell adhesion molecule isoform 2 precursor [Homo
sapiens]
Length = 1253
Score = 36.6 bits (83), Expect = 0.034
Identities = 43/206 (20%), Positives = 73/206 (35%), Gaps = 30/206 (14%)
Query: 131 VSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQV------LVTPEVTLFQNR 184
V+ + N LQ+ V DG YRC+ G+ Y++ V L P+ L+
Sbjct: 288 VTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHKPQSHLYGPG 347
Query: 185 NRTAVCKAVAGKPAAHISW----IPEGDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCH 240
+ V G+P ++W IP + A Q+Y + S V+
Sbjct: 348 ETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEAR 407
Query: 241 VSH--LTGNKSLYIELLPVPGAKKSAKLYI------PYIILTIIILTIVGFIWLLKVNGC 292
H L N +Y+ LP + Y+ Y++ + WL
Sbjct: 408 NRHGLLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL------ 461
Query: 293 RKYKLNKTESTPVVEEDEMQPYASYT 318
+ T V++++ PYA+ T
Sbjct: 462 ------DEDGTTVLQDERFFPYANGT 481
>gi|4557707 L1 cell adhesion molecule isoform 1 precursor [Homo
sapiens]
Length = 1257
Score = 36.6 bits (83), Expect = 0.034
Identities = 43/206 (20%), Positives = 73/206 (35%), Gaps = 30/206 (14%)
Query: 131 VSRPDQNSDLQIRTVAITHDGYYRCIMVTPDGNFHRGYHLQV------LVTPEVTLFQNR 184
V+ + N LQ+ V DG YRC+ G+ Y++ V L P+ L+
Sbjct: 288 VTYQNHNKTLQLLKVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHKPQSHLYGPG 347
Query: 185 NRTAVCKAVAGKPAAHISW----IPEGDCATKQEYWSNGTVTVKSTCHWEVHNVSTVTCH 240
+ V G+P ++W IP + A Q+Y + S V+
Sbjct: 348 ETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEAR 407
Query: 241 VSH--LTGNKSLYIELLPVPGAKKSAKLYI------PYIILTIIILTIVGFIWLLKVNGC 292
H L N +Y+ LP + Y+ Y++ + WL
Sbjct: 408 NRHGLLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWL------ 461
Query: 293 RKYKLNKTESTPVVEEDEMQPYASYT 318
+ T V++++ PYA+ T
Sbjct: 462 ------DEDGTTVLQDERFFPYANGT 481
>gi|209413732 poliovirus receptor isoform delta [Homo sapiens]
Length = 392
Score = 36.6 bits (83), Expect = 0.034
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 18/124 (14%)
Query: 136 QNSDLQIRTVAITHDGYYRCIMVT-PDGNFHRGYHLQVLVTPEVTLFQNRNRT------- 187
+N+ L++ + + +G Y C+ VT P G+ L+VL P+ T + +
Sbjct: 104 RNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPM 163
Query: 188 AVCKAVAGKPAAHISWIPE--GDCATKQ-EYWSNGTVTVKSTCHWEVHNVS-----TVTC 239
A C + G+P A I+W + G T Q + +GTVTV S W + S VTC
Sbjct: 164 ARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSL--WILVPSSQVDGKNVTC 221
Query: 240 HVSH 243
V H
Sbjct: 222 KVEH 225
>gi|209413730 poliovirus receptor isoform gamma [Homo sapiens]
Length = 364
Score = 36.6 bits (83), Expect = 0.034
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 18/124 (14%)
Query: 136 QNSDLQIRTVAITHDGYYRCIMVT-PDGNFHRGYHLQVLVTPEVTLFQNRNRT------- 187
+N+ L++ + + +G Y C+ VT P G+ L+VL P+ T + +
Sbjct: 104 RNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPM 163
Query: 188 AVCKAVAGKPAAHISWIPE--GDCATKQ-EYWSNGTVTVKSTCHWEVHNVS-----TVTC 239
A C + G+P A I+W + G T Q + +GTVTV S W + S VTC
Sbjct: 164 ARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSL--WILVPSSQVDGKNVTC 221
Query: 240 HVSH 243
V H
Sbjct: 222 KVEH 225
>gi|209413728 poliovirus receptor isoform beta [Homo sapiens]
Length = 372
Score = 36.6 bits (83), Expect = 0.034
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 18/124 (14%)
Query: 136 QNSDLQIRTVAITHDGYYRCIMVT-PDGNFHRGYHLQVLVTPEVTLFQNRNRT------- 187
+N+ L++ + + +G Y C+ VT P G+ L+VL P+ T + +
Sbjct: 104 RNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPM 163
Query: 188 AVCKAVAGKPAAHISWIPE--GDCATKQ-EYWSNGTVTVKSTCHWEVHNVS-----TVTC 239
A C + G+P A I+W + G T Q + +GTVTV S W + S VTC
Sbjct: 164 ARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSL--WILVPSSQVDGKNVTC 221
Query: 240 HVSH 243
V H
Sbjct: 222 KVEH 225
>gi|209413726 poliovirus receptor isoform alpha [Homo sapiens]
Length = 417
Score = 36.6 bits (83), Expect = 0.034
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 18/124 (14%)
Query: 136 QNSDLQIRTVAITHDGYYRCIMVT-PDGNFHRGYHLQVLVTPEVTLFQNRNRT------- 187
+N+ L++ + + +G Y C+ VT P G+ L+VL P+ T + +
Sbjct: 104 RNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPM 163
Query: 188 AVCKAVAGKPAAHISWIPE--GDCATKQ-EYWSNGTVTVKSTCHWEVHNVS-----TVTC 239
A C + G+P A I+W + G T Q + +GTVTV S W + S VTC
Sbjct: 164 ARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSL--WILVPSSQVDGKNVTC 221
Query: 240 HVSH 243
V H
Sbjct: 222 KVEH 225
>gi|115529482 neural cell adhesion molecule 1 isoform 2 [Homo
sapiens]
Length = 858
Score = 36.6 bits (83), Expect = 0.034
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 12/108 (11%)
Query: 103 GQPSCTKAYKKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGYYRCIMVTPDG 162
G P T ++ K+ + ++ DE+ + D +S L I+ V + Y CI G
Sbjct: 239 GFPEPTMSWTKDGEQIEQEE-DDEKYIF---SDDSSQLTIKKVDKNDEAEYICIAENKAG 294
Query: 163 NFHRGYHLQVLVTPEVTLFQNRNR-------TAVCKAVAGKPAAHISW 203
HL+V P++T +N+ T C+A +G P I+W
Sbjct: 295 EQDATIHLKVFAKPKITYVENQTAMELEEQVTLTCEA-SGDPIPSITW 341
Score = 32.7 bits (73), Expect = 0.49
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 137 NSDLQIRTVAITHDGYYRC---IMVTPDGNFHRGYHLQVLVTPEVTLFQN---------R 184
N+ LQIR + T +G YRC I+ + NF + + V V P + QN +
Sbjct: 171 NNYLQIRGIKKTDEGTYRCEGRILARGEINF-KDIQVIVNVPPTIQARQNIVNATANLGQ 229
Query: 185 NRTAVCKAVAGKPAAHISWIPEGDCATKQE 214
+ T VC A G P +SW +G+ ++E
Sbjct: 230 SVTLVCDA-EGFPEPTMSWTKDGEQIEQEE 258
Score = 32.0 bits (71), Expect = 0.84
Identities = 60/289 (20%), Positives = 101/289 (34%), Gaps = 57/289 (19%)
Query: 7 TANLGLLLILTIFLVAEAEGAAQPNNS-------LMLQTSKENHALASSSLCMDEKQITQ 59
TANLG ++ LV +AEG +P S + + E + + S + K++ +
Sbjct: 224 TANLGQ----SVTLVCDAEGFPEPTMSWTKDGEQIEQEEDDEKYIFSDDSSQLTIKKVDK 279
Query: 60 N--------------------YSKVLAE-----VNTSWPVKMATNAVLCCPPIALRNLII 94
N + KV A+ V +++ L C +
Sbjct: 280 NDEAEYICIAENKAGEQDATIHLKVFAKPKITYVENQTAMELEEQVTLTCEASG-DPIPS 338
Query: 95 ITWEIILRGQPSCTKAY--KKETNETKETNCTDERITWVSRPDQNSDLQIRTVAITHDGY 152
ITW R S KA + E ET + + V + S L ++++ T G
Sbjct: 339 ITWRTSTRNISSEEKASWTRPEKQETLDGHMV------VRSHARVSSLTLKSIQYTDAGE 392
Query: 153 YRCIMVTPDGNFHRGYHLQVLVTPE------VTLFQNRNRTAVCKAVAGKPAAHISWIPE 206
Y C G + +L+V P+ V ++ C+ A P+A ISW +
Sbjct: 393 YICTASNTIGQDSQSMYLEVQYAPKLQGPVAVYTWEGNQVNITCEVFA-YPSATISWFRD 451
Query: 207 GDCATKQEYWSNGTVTVKSTCHWEV-----HNVSTVTCHVSHLTGNKSL 250
G Y + S + EV ++ C + G +SL
Sbjct: 452 GQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESL 500
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,298,780
Number of Sequences: 37866
Number of extensions: 564778
Number of successful extensions: 1797
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 1575
Number of HSP's gapped (non-prelim): 245
length of query: 348
length of database: 18,247,518
effective HSP length: 103
effective length of query: 245
effective length of database: 14,347,320
effective search space: 3515093400
effective search space used: 3515093400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.