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Search of human proteins with 20270357
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20270357 zinc finger, AN1-type domain 2B [Homo sapiens]
(257 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|20270357 zinc finger, AN1-type domain 2B [Homo sapiens] 538 e-153
gi|226532848 zinc finger, AN1-type domain 2A [Homo sapiens] 210 9e-55
gi|13375985 zinc finger, AN1-type domain 1 [Homo sapiens] 78 7e-15
gi|190341072 AN1, ubiquitin-like, homolog [Homo sapiens] 35 0.049
gi|190341070 AN1, ubiquitin-like, homolog [Homo sapiens] 35 0.049
gi|94818781 DENN/MADD domain containing 4C [Homo sapiens] 35 0.064
gi|122937219 F-box protein 41 [Homo sapiens] 35 0.064
gi|161019170 mucin 5AC [Homo sapiens] 34 0.14
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 34 0.14
gi|134288865 solute carrier family 4, sodium bicarbonate cotrans... 34 0.14
gi|24307909 ral guanine nucleotide dissociation stimulator isofo... 34 0.14
gi|108796058 ral guanine nucleotide dissociation stimulator isof... 34 0.14
gi|194248095 epsin 1 isoform b [Homo sapiens] 34 0.14
gi|157388929 epsin 3 [Homo sapiens] 34 0.14
gi|4508005 tripartite motif-containing 26 [Homo sapiens] 34 0.14
gi|134284361 LIM homeobox protein 6 isoform 2 [Homo sapiens] 33 0.19
gi|134284359 LIM homeobox protein 6 isoform 1 [Homo sapiens] 33 0.19
gi|149408126 nemo like kinase [Homo sapiens] 33 0.24
gi|94721334 hypothetical protein LOC54629 isoform a [Homo sapiens] 33 0.24
gi|94721338 hypothetical protein LOC54629 isoform b [Homo sapiens] 33 0.24
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 33 0.32
gi|239757778 PREDICTED: hypothetical protein [Homo sapiens] 33 0.32
gi|169212026 PREDICTED: keratin associated protein [Homo sapiens] 33 0.32
gi|44890059 involucrin [Homo sapiens] 33 0.32
gi|239747673 PREDICTED: doublecortin domain-containing protein E... 32 0.42
gi|239741542 PREDICTED: doublecortin domain-containing protein E... 32 0.42
gi|170932550 FLT3-interacting zinc finger 1 [Homo sapiens] 32 0.42
gi|239754166 PREDICTED: hypothetical protein [Homo sapiens] 32 0.54
gi|169211819 PREDICTED: keratin associated protein [Homo sapiens] 32 0.54
gi|239748699 PREDICTED: hypothetical protein [Homo sapiens] 32 0.54
>gi|20270357 zinc finger, AN1-type domain 2B [Homo sapiens]
Length = 257
Score = 538 bits (1386), Expect = e-153
Identities = 257/257 (100%), Positives = 257/257 (100%)
Query: 1 MEFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLC 60
MEFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLC
Sbjct: 1 MEFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLC 60
Query: 61 NVPVPVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERAGCRQREMMKLTCERCSR 120
NVPVPVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERAGCRQREMMKLTCERCSR
Sbjct: 61 NVPVPVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERAGCRQREMMKLTCERCSR 120
Query: 121 NFCIKHRHPLDHDCSGEGHPTSRAGLAAISRAQAVASTSTVPSPSQTMPSCTSPSRATTR 180
NFCIKHRHPLDHDCSGEGHPTSRAGLAAISRAQAVASTSTVPSPSQTMPSCTSPSRATTR
Sbjct: 121 NFCIKHRHPLDHDCSGEGHPTSRAGLAAISRAQAVASTSTVPSPSQTMPSCTSPSRATTR 180
Query: 181 SPSWTAPPVIALQNGLSEDEALQRALEMSLAETKPQVPSCQEEEDLALAQALSASEAEYQ 240
SPSWTAPPVIALQNGLSEDEALQRALEMSLAETKPQVPSCQEEEDLALAQALSASEAEYQ
Sbjct: 181 SPSWTAPPVIALQNGLSEDEALQRALEMSLAETKPQVPSCQEEEDLALAQALSASEAEYQ 240
Query: 241 RQQAQSRSSKPSNCSLC 257
RQQAQSRSSKPSNCSLC
Sbjct: 241 RQQAQSRSSKPSNCSLC 257
>gi|226532848 zinc finger, AN1-type domain 2A [Homo sapiens]
Length = 145
Score = 210 bits (535), Expect = 9e-55
Identities = 86/145 (59%), Positives = 109/145 (75%)
Query: 1 MEFPDLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLC 60
MEFPDLG HCSE +C++LDFLP+KCDAC FC DH YA H C A+QKD+ VPVCPLC
Sbjct: 1 MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLC 60
Query: 61 NVPVPVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERAGCRQREMMKLTCERCSR 120
N P+PV +G+ PD VG+HIDRDC S P ++K KIFT +C + GC+++EM+++ C +C
Sbjct: 61 NTPIPVKKGQIPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHG 120
Query: 121 NFCIKHRHPLDHDCSGEGHPTSRAG 145
NFCI+HRHPLDH C PT +AG
Sbjct: 121 NFCIQHRHPLDHSCRHGSRPTIKAG 145
>gi|13375985 zinc finger, AN1-type domain 1 [Homo sapiens]
Length = 268
Score = 78.2 bits (191), Expect = 7e-15
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 36/130 (27%)
Query: 5 DLGAHCSEPSCQRLDFLPLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLCNVPV 64
D+G HC C++ DFLP CD CSGIFC +H + H C
Sbjct: 5 DIGQHCQVEHCRQRDFLPFVCDDCSGIFCLEHRSRESHGC-------------------- 44
Query: 65 PVARGEPPDRAVGEHIDRDCRSDPAQQKRKIFTNKCERAGCRQREMMKLTCERCSRNFCI 124
P + E + D + + C C +RE++ + C C +NFC+
Sbjct: 45 ------PEVTVINERLKTDQHT----------SYPCSFKDCAERELVAVICPYCEKNFCL 88
Query: 125 KHRHPLDHDC 134
+HRH DH+C
Sbjct: 89 RHRHQSDHEC 98
>gi|190341072 AN1, ubiquitin-like, homolog [Homo sapiens]
Length = 727
Score = 35.4 bits (80), Expect = 0.049
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Query: 88 PAQQKRKIFTNKCERAGCRQREMMKLTCERCSRNFCIKHRHPLDHDCSGEGHPTSRAGLA 147
P Q K+K TN C G + C RC NFC HR+ H C+ + AG
Sbjct: 656 PLQTKKKT-TNHCFLCGKKTGLASSYEC-RCGNNFCASHRYAETHGCT---YDYKSAGRR 710
Query: 148 AISRAQAVASTSTVP 162
+ A V + +P
Sbjct: 711 YLHEANPVVNAPKLP 725
>gi|190341070 AN1, ubiquitin-like, homolog [Homo sapiens]
Length = 727
Score = 35.4 bits (80), Expect = 0.049
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Query: 88 PAQQKRKIFTNKCERAGCRQREMMKLTCERCSRNFCIKHRHPLDHDCSGEGHPTSRAGLA 147
P Q K+K TN C G + C RC NFC HR+ H C+ + AG
Sbjct: 656 PLQTKKKT-TNHCFLCGKKTGLASSYEC-RCGNNFCASHRYAETHGCT---YDYKSAGRR 710
Query: 148 AISRAQAVASTSTVP 162
+ A V + +P
Sbjct: 711 YLHEANPVVNAPKLP 725
>gi|94818781 DENN/MADD domain containing 4C [Homo sapiens]
Length = 1673
Score = 35.0 bits (79), Expect = 0.064
Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 1/119 (0%)
Query: 129 PLDHDCSGEGHPTSRAGLAAISRAQAVASTSTVPSPSQT-MPSCTSPSRATTRSPSWTAP 187
PLDH + +P S A+SR++ +PS+T TS S SP +
Sbjct: 1044 PLDHGSPAQENPESEKSSPAVSRSKTFTGRFKQQTPSRTHKERSTSLSALVRSSPHGSLG 1103
Query: 188 PVIALQNGLSEDEALQRALEMSLAETKPQVPSCQEEEDLALAQALSASEAEYQRQQAQS 246
V+ +GL D L L Q + + +A+A A S S+ E + + S
Sbjct: 1104 SVVNSLSGLKLDNILSGPKIDVLKSGMKQAATVASKMWVAVASAYSYSDDEEETNRDYS 1162
>gi|122937219 F-box protein 41 [Homo sapiens]
Length = 936
Score = 35.0 bits (79), Expect = 0.064
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 150 SRAQAVASTSTVPSPSQTMPSCTSPSRATTRSPSWTAPPVIALQNGLSEDEALQRALEMS 209
+R +S + P P C P+ A+ SPS P +A + GL+ + RALE
Sbjct: 220 ARKSVASSACSTPPPGPGPGPCPGPASASPASPS---PADVAYEEGLARLKI--RALEK- 273
Query: 210 LAETKPQVPSCQEEEDLALAQALSASEAEYQRQQAQSRSSKPSNCSL 256
E ++ EE + +A + +AE +R+ A+ +++ + L
Sbjct: 274 -LEVDRRLERLSEEVEQKIAGQVGRLQAELERKAAELETARQESARL 319
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 33.9 bits (76), Expect = 0.14
Identities = 30/118 (25%), Positives = 42/118 (35%), Gaps = 13/118 (11%)
Query: 105 CRQREMM---KLTCERCSRNFCIKHRH-PLDHDCSGEGHPTSRAGLAAISRAQAVASTST 160
CR RE + K+ R FC + H P S P+S G I Q A+T+T
Sbjct: 3527 CRNREQVGKFKMCFNYEIRVFCCNYGHCPSTPATSSTATPSSTPGTTWILTEQTTAATTT 3586
Query: 161 VPSPSQTMPSCTSPSRATTRSPSWTAPPVIALQNGLSEDEALQRALEMSLAETKPQVP 218
+ S +PS T P PP + + +A S T +P
Sbjct: 3587 ATTGSTAIPSST---------PGTAPPPKVLTSTATTPTATSSKATSSSSPRTATTLP 3635
Score = 30.8 bits (68), Expect = 1.2
Identities = 40/157 (25%), Positives = 57/157 (36%), Gaps = 8/157 (5%)
Query: 105 CRQREMM---KLTCERCSRNFCIKHRH-PLDHDCSGEGHPTSRAGLAAISRAQAVASTST 160
CR RE + K+ R FC + H P S P+S G I +T+T
Sbjct: 3025 CRNREQVGKFKMCFNYEIRVFCCNYGHCPSTPATSSTAMPSSTPGTTWILTELTTTATTT 3084
Query: 161 VPSPSQTMPSCTSPSRATTRSPSWTAPPVIALQN--GLSEDEALQRALEMSLAETKPQVP 218
+ S PS T + PS TA + + S +A +S T P V
Sbjct: 3085 ESTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVT 3144
Query: 219 SCQEE--EDLALAQALSASEAEYQRQQAQSRSSKPSN 253
S + A AL A + A S ++ PS+
Sbjct: 3145 SSKATPFSSPGTATALPALRSTATTPTATSFTAIPSS 3181
Score = 30.8 bits (68), Expect = 1.2
Identities = 40/157 (25%), Positives = 57/157 (36%), Gaps = 8/157 (5%)
Query: 105 CRQREMM---KLTCERCSRNFCIKHRH-PLDHDCSGEGHPTSRAGLAAISRAQAVASTST 160
CR RE + K+ R FC + H P S P+S G I +T+T
Sbjct: 4172 CRNREQVGKFKMCFNYEIRVFCCNYGHCPSTPATSSTATPSSTPGTTWILTKLTTTATTT 4231
Query: 161 VPSPSQTMPSCTSPSRATTRSPSWTAPPVIALQN--GLSEDEALQRALEMSLAETKPQVP 218
+ S PS T + PS TA + + S +A +S T P V
Sbjct: 4232 ESTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVT 4291
Query: 219 SCQEE--EDLALAQALSASEAEYQRQQAQSRSSKPSN 253
S + A AL A + A S ++ PS+
Sbjct: 4292 SSKATPFSSPGTATALPALRSTATTPTATSFTAIPSS 4328
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 33.9 bits (76), Expect = 0.14
Identities = 30/118 (25%), Positives = 42/118 (35%), Gaps = 13/118 (11%)
Query: 105 CRQREMM---KLTCERCSRNFCIKHRH-PLDHDCSGEGHPTSRAGLAAISRAQAVASTST 160
CR RE + K+ R FC + H P S P+S G I Q A+T+T
Sbjct: 2947 CRNREQVGKFKMCFNYEIRVFCCNYGHCPSTPATSSTATPSSTPGTTWILTEQTTAATTT 3006
Query: 161 VPSPSQTMPSCTSPSRATTRSPSWTAPPVIALQNGLSEDEALQRALEMSLAETKPQVP 218
+ S +PS T P PP + + +A S T +P
Sbjct: 3007 ATTGSTAIPSST---------PGTAPPPKVLTSTATTPTATSSKATSSSSPRTATTLP 3055
Score = 30.8 bits (68), Expect = 1.2
Identities = 40/157 (25%), Positives = 57/157 (36%), Gaps = 8/157 (5%)
Query: 105 CRQREMM---KLTCERCSRNFCIKHRH-PLDHDCSGEGHPTSRAGLAAISRAQAVASTST 160
CR RE + K+ R FC + H P S P+S G I +T+T
Sbjct: 2390 CRNREQVGKFKMCFNYEIRVFCCNYGHCPSTPATSSTAMPSSTPGTTWILTELTTTATTT 2449
Query: 161 VPSPSQTMPSCTSPSRATTRSPSWTAPPVIALQN--GLSEDEALQRALEMSLAETKPQVP 218
+ S PS T + PS TA + + S +A +S T P V
Sbjct: 2450 ESTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVT 2509
Query: 219 SCQEE--EDLALAQALSASEAEYQRQQAQSRSSKPSN 253
S + A AL A + A S ++ PS+
Sbjct: 2510 SSKATPFSSPGTATALPALRSTATTPTATSFTAIPSS 2546
Score = 30.8 bits (68), Expect = 1.2
Identities = 40/157 (25%), Positives = 57/157 (36%), Gaps = 8/157 (5%)
Query: 105 CRQREMM---KLTCERCSRNFCIKHRH-PLDHDCSGEGHPTSRAGLAAISRAQAVASTST 160
CR RE + K+ R FC + H P S P+S G I +T+T
Sbjct: 3647 CRNREQVGKFKMCFNYEIRVFCCNYGHCPSTPATSSTATPSSTPGTTWILTKLTTTATTT 3706
Query: 161 VPSPSQTMPSCTSPSRATTRSPSWTAPPVIALQN--GLSEDEALQRALEMSLAETKPQVP 218
+ S PS T + PS TA + + S +A +S T P V
Sbjct: 3707 ESTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPHVSTTATTPTVT 3766
Query: 219 SCQEE--EDLALAQALSASEAEYQRQQAQSRSSKPSN 253
S + A AL A + A S ++ PS+
Sbjct: 3767 SSKATPFSSPGTATALPALRSTATTPTATSFTAIPSS 3803
>gi|134288865 solute carrier family 4, sodium bicarbonate
cotransporter, member 7 [Homo sapiens]
Length = 1214
Score = 33.9 bits (76), Expect = 0.14
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 26/97 (26%)
Query: 138 GH--PTSRAGLAAISRAQAVASTSTVPSPSQTMPSCTSPSRATTRSPSWTAPPVIALQNG 195
GH P+SRAG A SR T+ VP+P + PS S SR T+R
Sbjct: 283 GHLLPSSRAGTPAGSRC-----TTPVPTPQNSPPSSPSISRLTSR--------------- 322
Query: 196 LSEDEALQRALEMSLAETKPQVPSC---QEEEDLALA 229
S E+ ++A E+ ++ +P+ EEDL A
Sbjct: 323 -SSQESQRQAPELLVSPASDDIPTVVIHPPEEDLEAA 358
>gi|24307909 ral guanine nucleotide dissociation stimulator isoform
1 [Homo sapiens]
Length = 914
Score = 33.9 bits (76), Expect = 0.14
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 162 PSPSQTMPSCTSPSRATTRSPSWTAPPVIALQNGLSEDE 200
P+PSQT+ +P+ + PSW +P + +NGLSE++
Sbjct: 343 PAPSQTLELEPAPAPVPSLQPSWPSP--VVAENGLSEEK 379
>gi|108796058 ral guanine nucleotide dissociation stimulator isoform
2 [Homo sapiens]
Length = 859
Score = 33.9 bits (76), Expect = 0.14
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 162 PSPSQTMPSCTSPSRATTRSPSWTAPPVIALQNGLSEDE 200
P+PSQT+ +P+ + PSW +P + +NGLSE++
Sbjct: 288 PAPSQTLELEPAPAPVPSLQPSWPSP--VVAENGLSEEK 324
>gi|194248095 epsin 1 isoform b [Homo sapiens]
Length = 576
Score = 33.9 bits (76), Expect = 0.14
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 193 QNGLSEDEALQRALEMSLAETKPQVPSCQEEEDLALAQALSASEAEYQRQQ 243
Q+ E+ LQ AL MS E Q PSC E+D L ALS S E+ +++
Sbjct: 179 QSSGEEELQLQLALAMSKEEAD-QPPSCGPEDDAQLQLALSLSREEHDKEE 228
>gi|157388929 epsin 3 [Homo sapiens]
Length = 632
Score = 33.9 bits (76), Expect = 0.14
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 173 SPS--RATTRSPSWTAPPVIALQNGLSEDEA-LQRALEMSLAET-KPQVPSCQEEEDLAL 228
SPS +++ SP +T+ A E+E LQ AL MS E KP P+ +EDL L
Sbjct: 182 SPSSYNSSSSSPRYTSDLEQARPQTSGEEELQLQLALAMSREEAEKPVPPASHRDEDLQL 241
Query: 229 AQALSASEAEYQRQ 242
AL S E++++
Sbjct: 242 QLALRLSRQEHEKE 255
>gi|4508005 tripartite motif-containing 26 [Homo sapiens]
Length = 539
Score = 33.9 bits (76), Expect = 0.14
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 14/120 (11%)
Query: 18 LDFL--PLKCDACSGIFCADHVAYAQHHCGSAYQKDIQVPVCPLCNVPVPVARGEPPDR- 74
LD+L P+ D C +FC + GS PVCPLC P P +
Sbjct: 20 LDYLRDPVTID-CGHVFCRSCTTDVRPISGSR-------PVCPLCKKPFKKENIRPVWQL 71
Query: 75 -AVGEHIDRDCRSDPAQQKRKIFTNKCERAGC-RQREMMKLTCERCSRNFCIKHRHPLDH 132
++ E+I+R + D +Q ++ + + C R RE + CE + C+ R +H
Sbjct: 72 ASLVENIER-LKVDKGRQPGEVTREQQDAKLCERHREKLHYYCEDDGKLLCVMCRESREH 130
>gi|134284361 LIM homeobox protein 6 isoform 2 [Homo sapiens]
Length = 377
Score = 33.5 bits (75), Expect = 0.19
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 162 PSPSQTMPSCTSPSRATTRSPSWTAPPVIALQNGLSEDEALQRALEMSLAETKPQVPS 219
P+ Q M S +ATTR TAPP +A S+ EAL AL+ + P PS
Sbjct: 24 PATDQVMAQPGSGCKATTRCLEGTAPPAMA----QSDAEALAGALDKDEGQASPCTPS 77
>gi|134284359 LIM homeobox protein 6 isoform 1 [Homo sapiens]
Length = 392
Score = 33.5 bits (75), Expect = 0.19
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 162 PSPSQTMPSCTSPSRATTRSPSWTAPPVIALQNGLSEDEALQRALEMSLAETKPQVPS 219
P+ Q M S +ATTR TAPP +A S+ EAL AL+ + P PS
Sbjct: 24 PATDQVMAQPGSGCKATTRCLEGTAPPAMA----QSDAEALAGALDKDEGQASPCTPS 77
>gi|149408126 nemo like kinase [Homo sapiens]
Length = 527
Score = 33.1 bits (74), Expect = 0.24
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 126 HRHPLDHDCSGEG---HPTSRAGLAAISRAQAVASTSTVPSPSQTMPSCTSPSRATTRSP 182
H HP H G HP + +A + A A A+ + + +P Q P SP+ P
Sbjct: 46 HHHPQHHLHPGSAAAVHPVQQHTSSAAAAAAAAAAAAAMLNPGQQQPYFPSPAPGQAPGP 105
Query: 183 SWTAP 187
+ AP
Sbjct: 106 AAAAP 110
>gi|94721334 hypothetical protein LOC54629 isoform a [Homo sapiens]
Length = 621
Score = 33.1 bits (74), Expect = 0.24
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 9/120 (7%)
Query: 132 HDCSGEGHPTSRAGLAAISRAQAVASTSTVPSPSQTMPSCTSPSRATTRSPSWTAPPVIA 191
H+ G +R LA +A+ A+ S PS + + S S SPS + +
Sbjct: 121 HELGTAGDAGARPDLAGTCQAELTAAGSEEPSSAGGLSSSCSDPSPPGESPSLDSLESFS 180
Query: 192 LQNGL-------SEDEALQRALEMS--LAETKPQVPSCQEEEDLALAQALSASEAEYQRQ 242
+ SE+ A R E A VP C+EEE AQ L+AS+ + Q
Sbjct: 181 NLHSFPSSCEFNSEEGAENRVPEEEEGAAVLPGAVPLCKEEEGEETAQVLAASKERFPGQ 240
>gi|94721338 hypothetical protein LOC54629 isoform b [Homo sapiens]
Length = 620
Score = 33.1 bits (74), Expect = 0.24
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 9/120 (7%)
Query: 132 HDCSGEGHPTSRAGLAAISRAQAVASTSTVPSPSQTMPSCTSPSRATTRSPSWTAPPVIA 191
H+ G +R LA +A+ A+ S PS + + S S SPS + +
Sbjct: 121 HELGTAGDAGARPDLAGTCQAELTAAGSEEPSSAGGLSSSCSDPSPPGESPSLDSLESFS 180
Query: 192 LQNGL-------SEDEALQRALEMS--LAETKPQVPSCQEEEDLALAQALSASEAEYQRQ 242
+ SE+ A R E A VP C+EEE AQ L+AS+ + Q
Sbjct: 181 NLHSFPSSCEFNSEEGAENRVPEEEEGAAVLPGAVPLCKEEEGEETAQVLAASKERFPGQ 240
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 32.7 bits (73), Expect = 0.32
Identities = 16/50 (32%), Positives = 22/50 (44%)
Query: 139 HPTSRAGLAAISRAQAVASTSTVPSPSQTMPSCTSPSRATTRSPSWTAPP 188
HPT+ I+ + + +T P P TM T P TT P+ T P
Sbjct: 1240 HPTTTPHPTTITHSTMIPDPTTTPQPFTTMQPTTMPHPTTTPHPTTTPHP 1289
>gi|239757778 PREDICTED: hypothetical protein [Homo sapiens]
Length = 93
Score = 32.7 bits (73), Expect = 0.32
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Query: 157 STSTVPSPSQTMPSCTSPS------RATTRSPSWTAPPVIALQNGLS 197
ST T+P+P+ + P R+ TR+P+WT PP A NG S
Sbjct: 38 STRTIPAPAPSARRRARPKPGAQLPRSRTRTPAWTTPPT-ACPNGAS 83
>gi|169212026 PREDICTED: keratin associated protein [Homo sapiens]
Length = 517
Score = 32.7 bits (73), Expect = 0.32
Identities = 60/271 (22%), Positives = 90/271 (33%), Gaps = 37/271 (13%)
Query: 10 CSEPS-CQRLDFLPLKCDACSGIFCADHVAYAQHHCGS-AYQKDIQVPVC-------PLC 60
CSE S CQ + L C+ C V Q C + Q P C P+C
Sbjct: 258 CSESSICQPATCVALVCEPV----CLRPVCCVQSSCEPPSVPSTCQEPSCCVSSICQPIC 313
Query: 61 NVPVPVARGEPPDRAVGE------HIDRDCRSDPAQQKRKIFTNKCERAGCRQREMMKLT 114
+ P P + P V ++ + CRS + + C C
Sbjct: 314 SEPSPCS----PAVCVSSPCQPTCYVVKRCRS-VCPEPVSCPSTSCRPLSCSPGSSASAI 368
Query: 115 CE-RCSRNFCIKHRHPLDHDCSGEGHPTSRAGLAAISRAQAVASTSTVPSPSQTMPSCTS 173
C C R F I + P SR I + S S P+C
Sbjct: 369 CRPTCPRTFYIPSSSKRPCSATISYRPVSRPICRPICSGLLTYRQPYMTSISYR-PACYR 427
Query: 174 PSRATTRSP----SWTAPPVIALQNGLSEDEALQR------ALEMSLAETKPQVPSCQEE 223
P + R P S++ PV + +E ++ +R + ++ +T P EE
Sbjct: 428 PCYSILRRPACVTSYSCRPVY-FRPSCTESDSCKRDCKKSTSSQLDCVDTTPCKVDVSEE 486
Query: 224 EDLALAQALSASEAEYQRQQAQSRSSKPSNC 254
+A S + AQ +SKP+NC
Sbjct: 487 GPCQPTEAKPISPTTREAAAAQPAASKPANC 517
>gi|44890059 involucrin [Homo sapiens]
Length = 585
Score = 32.7 bits (73), Expect = 0.32
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 163 SPSQTMPSCTSPSRATTRSPSWTAPPVIALQNGLSEDEALQRALEMSLAETKPQVPSCQE 222
S T+P SP+ + + PPV Q + + L + E +VPS QE
Sbjct: 2 SQQHTLPVTLSPALSQELLKT-VPPPVNTHQEQMKQPTPLPPPCQKVPVELPVEVPSKQE 60
Query: 223 EEDLALAQALSASEAEYQRQQAQSR 247
E+ + + L E E Q+++ Q +
Sbjct: 61 EKHMTAVKGLPEQECEQQQKEPQEQ 85
>gi|239747673 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 714
Score = 32.3 bits (72), Expect = 0.42
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 140 PTSRAGLAAISRAQAVASTSTVPSPSQTMPSCTSPSRATTRSPS----WTAPPV 189
P A A S++ VAST ++ P +PS +SP SPS W+ PPV
Sbjct: 92 PEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWSGPPV 145
>gi|239741542 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 510
Score = 32.3 bits (72), Expect = 0.42
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 140 PTSRAGLAAISRAQAVASTSTVPSPSQTMPSCTSPSRATTRSPS----WTAPPV 189
P A A S++ VAST ++ P +PS +SP SPS W+ PPV
Sbjct: 92 PEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASGWSGPPV 145
>gi|170932550 FLT3-interacting zinc finger 1 [Homo sapiens]
Length = 496
Score = 32.3 bits (72), Expect = 0.42
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 115 CERCSRNF---CIKHRHPLDHDCSGEGHPTSRAGLAAISRAQAVASTST 160
C RC R+F + RH L HD G G P ++A A A T
Sbjct: 230 CPRCERDFNAPALLERHKLTHDLQGPGAPPAQAWAAGPGAGPETAGEGT 278
>gi|239754166 PREDICTED: hypothetical protein [Homo sapiens]
Length = 91
Score = 32.0 bits (71), Expect = 0.54
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 135 SGEGHPTSRAGLAAISRAQAVASTSTVPSPS-QTMPSCTSPSRATTRSPSWTAP 187
S G SR LAA R +A +P P+ + SC +P+ T+ +P TAP
Sbjct: 6 SSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAP 59
>gi|169211819 PREDICTED: keratin associated protein [Homo sapiens]
Length = 517
Score = 32.0 bits (71), Expect = 0.54
Identities = 57/267 (21%), Positives = 87/267 (32%), Gaps = 29/267 (10%)
Query: 10 CSEPS-CQRLDFLPLKCDACSGIFCADHVAYAQHHCGS-AYQKDIQVPVCPLCNVPVPVA 67
CSE S CQ + L C+ C V Q C + Q P C + ++ P+
Sbjct: 258 CSESSICQPATCVALVCEPV----CLRPVCCVQSSCEPPSVPSTCQEPSCCVSSICQPIC 313
Query: 68 RGEPPDRAVGEHIDRDCRSDPAQQKR---------KIFTNKCERAGCRQREMMKLTCE-R 117
EP + + C+ KR + C C C
Sbjct: 314 -SEPSPCSPAVCVSSPCQPTCYVVKRCPSVCPEPVSCPSTSCRPLSCSPGSSASAICRPT 372
Query: 118 CSRNFCIKHRHPLDHDCSGEGHPTSRAGLAAISRAQAVASTSTVPSPSQTMPSCTSPSRA 177
C R F I + P SR I + S S P+C P +
Sbjct: 373 CPRTFYIPSSSKRPCSATISYRPVSRPICRPICSGLLTYRQPYMTSISYR-PACYRPCYS 431
Query: 178 TTRSP----SWTAPPVIALQNGLSEDEALQR------ALEMSLAETKPQVPSCQEEEDLA 227
R P S++ PV + +E ++ +R + ++ +T P EE
Sbjct: 432 ILRRPACVTSYSCRPVY-FRPSCTESDSCKRDCKKSTSSQLDCVDTTPCKVDVSEEAPCQ 490
Query: 228 LAQALSASEAEYQRQQAQSRSSKPSNC 254
+A S + AQ +SKP+NC
Sbjct: 491 PTEAKPISPTTREAAAAQPAASKPANC 517
>gi|239748699 PREDICTED: hypothetical protein [Homo sapiens]
Length = 91
Score = 32.0 bits (71), Expect = 0.54
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 135 SGEGHPTSRAGLAAISRAQAVASTSTVPSPS-QTMPSCTSPSRATTRSPSWTAP 187
S G SR LAA R +A +P P+ + SC +P+ T+ +P TAP
Sbjct: 6 SSAGGSISRRALAASPRGRARDLQPAMPEPAPDAVGSCAAPASPTSAAPCSTAP 59
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.128 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,589,159
Number of Sequences: 37866
Number of extensions: 574931
Number of successful extensions: 3410
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 130
Number of HSP's that attempted gapping in prelim test: 3209
Number of HSP's gapped (non-prelim): 318
length of query: 257
length of database: 18,247,518
effective HSP length: 100
effective length of query: 157
effective length of database: 14,460,918
effective search space: 2270364126
effective search space used: 2270364126
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.