Guide to the Human Genome
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Name: ZFAND2B Sequence: fasta or formatted (257aa) NCBI GI: 20270357
Description:

zinc finger, AN1-type domain 2B

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.9         28           2
 C cysteine            7.4         19           1
 D aspartate           5.1         13           1
 E glutamate           6.6         17           3
 F phenylalanine       1.9          5           1
 G glycine             3.9         10           1
 H histidine           3.5          9           2
 I isoleucine          2.7          7           1
 K lysine              3.5          9           1
 L leucine             6.6         17           1
 M methionine          1.9          5           2
 N asparagine          1.9          5           1
 P proline             8.6         22           2
 Q glutamine           7.0         18           2
 R arginine            7.4         19           1
 S serine             10.9         28           2
 T threonine           4.3         11           2
 V valine              4.3         11           1
 W tryptophan          0.4          1           1
 Y tyrosine            1.2          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, AN1-type domain 2B 
ZFAND2A               0.361   zinc finger, AN1-type domain 2A 
ZFAND1                0.103   zinc finger, AN1-type domain 1 
ANUBL1                0.019   AN1, ubiquitin-like, homolog 
ANUBL1                0.019   AN1, ubiquitin-like, homolog 
DENND4C               0.019   DENN/MADD domain containing 4C 
FBXO41                0.019   F-box protein 41 
MUC5AC                0.018   mucin 5AC 
MUC5B                 0.018   mucin 5, subtype B, tracheobronchial 
SLC4A7                0.018   solute carrier family 4, sodium bicarbonate cotrans...
RALGDS                0.018   ral guanine nucleotide dissociation stimulator isofo...
RALGDS                0.018   ral guanine nucleotide dissociation stimulator isof...
EPN1                  0.018   epsin 1 isoform b 
EPN3                  0.018   epsin 3 
TRIM26                0.018   tripartite motif-containing 26 
LHX6                  0.016   LIM homeobox protein 6 isoform 2 
LHX6                  0.016   LIM homeobox protein 6 isoform 1 
NLK                   0.016   nemo like kinase 
FAM63B                0.016   hypothetical protein LOC54629 isoform a 
FAM63B                0.016   hypothetical protein LOC54629 isoform b 
LOC284297             0.016   hypothetical protein LOC284297 
LOC100134320          0.016   PREDICTED: hypothetical protein 
LOC100131696          0.016   PREDICTED: keratin associated protein 
IVL                   0.016   involucrin 
LOC728597             0.014   PREDICTED: doublecortin domain-containing protein E...
LOC728597             0.014   PREDICTED: doublecortin domain-containing protein E...
FIZ1                  0.014   FLT3-interacting zinc finger 1 
LOC100293205          0.014   PREDICTED: hypothetical protein 
LOC100131696          0.014   PREDICTED: keratin associated protein 
LOC100289336          0.014   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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