Guide to the Human Genome
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Name: ZFAND2A Sequence: fasta or formatted (145aa) NCBI GI: 226532848
Description:

zinc finger, AN1-type domain 2A

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1          6           2
 C cysteine           10.3         15           1
 D aspartate           8.3         12           1
 E glutamate           3.4          5           1
 F phenylalanine       5.5          8           1
 G glycine             5.5          8           1
 H histidine           7.6         11           1
 I isoleucine          4.1          6           1
 K lysine             13.1         19           3
 L leucine             4.1          6           1
 M methionine          2.1          3           1
 N asparagine          1.4          2           1
 P proline             8.3         12           1
 Q glutamine           4.8          7           1
 R arginine            3.4          5           1
 S serine              3.4          5           1
 T threonine           2.8          4           1
 V valine              6.2          9           3
 W tryptophan          0.0          0           0
 Y tyrosine            1.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, AN1-type domain 2A 
ZFAND2B               0.609   zinc finger, AN1-type domain 2B 
ZFAND1                0.171   zinc finger, AN1-type domain 1 
RNF31                 0.026   ring finger protein 31 
ZNF341                0.026   zinc finger protein 341 
RNF166                0.020   ring finger protein 166 
RBAK                  0.016   RB-associated KRAB repressor 
UHRF2                 0.016   ubiquitin-like with PHD and ring finger domains 2 [H...
DTX3L                 0.016   deltex 3-like 
AGAP1                 0.013   centaurin, gamma 2 isoform 2 
AGAP1                 0.013   centaurin, gamma 2 isoform 1 
ZNF195                0.013   zinc finger protein 195 isoform 2 
ZNF195                0.013   zinc finger protein 195 isoform 1 
ZNF195                0.013   zinc finger protein 195 isoform 3 
RNF144A               0.010   ring finger protein 144 
ZFAND3                0.010   zinc finger, AN1-type domain 3 
RPA4                  0.010   replication protein A4, 34kDa 
TBKBP1                0.010   TBK1 binding protein 1 
ADNP                  0.010   activity-dependent neuroprotector 
ADNP                  0.010   activity-dependent neuroprotector 
ANUBL1                0.010   AN1, ubiquitin-like, homolog 
ANUBL1                0.010   AN1, ubiquitin-like, homolog 
RNF122                0.010   ring finger protein 122 
LOC729956             0.007   hypothetical protein LOC729956 
LOC100293810          0.007   PREDICTED: hypothetical protein 
LOC100290021          0.007   PREDICTED: hypothetical protein XP_002346830 
LOC100287516          0.007   PREDICTED: hypothetical protein XP_002342663 
LOC100294261          0.007   PREDICTED: hypothetical protein XP_002344072 
LOC100294247          0.007   PREDICTED: hypothetical protein 
LOC100294212          0.007   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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