Guide to the Human Genome
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Name: SLC4A7 Sequence: fasta or formatted (1214aa) NCBI GI: 134288865
Description:

solute carrier family 4, sodium bicarbonate cotransporter, member 7

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         68           3
 C cysteine            1.6         20           1
 D aspartate           5.4         65           4
 E glutamate           7.2         88           2
 F phenylalanine       5.0         61           2
 G glycine             6.1         74           2
 H histidine           3.0         36           3
 I isoleucine          5.8         70           2
 K lysine              6.3         76           4
 L leucine            11.9        144           3
 M methionine          2.2         27           2
 N asparagine          2.4         29           2
 P proline             6.3         76           2
 Q glutamine           2.3         28           2
 R arginine            5.2         63           3
 S serine              8.3        101           2
 T threonine           5.4         66           2
 V valine              6.7         81           2
 W tryptophan          1.2         15           2
 Y tyrosine            2.1         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 4, sodium bicarbonate cotrans... 
SLC4A10               0.515   solute carrier family 4, sodium bicarbonate transpo...
SLC4A8                0.512   solute carrier family 4, sodium bicarbonate cotransp...
SLC4A8                0.507   solute carrier family 4, sodium bicarbonate cotransp...
SLC4A4                0.367   solute carrier family 4, sodium bicarbonate cotranspo...
SLC4A4                0.367   solute carrier family 4, sodium bicarbonate cotrans...
SLC4A4                0.367   solute carrier family 4, sodium bicarbonate cotrans...
SLC4A5                0.334   sodium bicarbonate transporter 4 isoform c 
SLC4A5                0.330   sodium bicarbonate transporter 4 isoform a 
SLC4A9                0.299   solute carrier family 4, sodium bicarbonate cotrans...
SLC4A2                0.225   solute carrier family 4, anion exchanger, member 2 ...
SLC4A3                0.222   solute carrier family 4, anion exchanger, member 3 ...
SLC4A3                0.222   solute carrier family 4, anion exchanger, member 3 ...
SLC4A1                0.201   solute carrier family 4, anion exchanger, member 1 [H...
SLC4A11               0.079   solute carrier family 4 member 11 
NCOA6                 0.007   nuclear receptor coactivator 6 
BRSK2                 0.006   BR serine/threonine kinase 2 
C5orf15               0.005   keratinocytes associated transmembrane protein 2 [Hom...
MYO10                 0.005   myosin X 
PRPF38B               0.005   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
SRCAP                 0.005   Snf2-related CBP activator protein 
MAFB                  0.005   transcription factor MAFB 
SRRM2                 0.005   splicing coactivator subunit SRm300 
NES                   0.005   nestin 
LPIN1                 0.005   lipin 1 
FSCB                  0.005   fibrous sheath CABYR binding protein 
PLEKHF2               0.004   phafin 2 
CIC                   0.004   capicua homolog 
FOXB1                 0.004   forkhead box B1 
LOC284297             0.004   hypothetical protein LOC284297 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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