Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ASCC2 Sequence: fasta or formatted (757aa) NCBI GI: 20270253
Description:

activating signal cointegrator 1 complex subunit 2

Referenced in:

Jun / Fos Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         53           4
 C cysteine            1.7         13           1
 D aspartate           8.3         63           4
 E glutamate           8.5         64           4
 F phenylalanine       4.2         32           1
 G glycine             4.0         30           1
 H histidine           2.5         19           1
 I isoleucine          4.4         33           2
 K lysine              5.5         42           2
 L leucine            11.0         83           2
 M methionine          1.7         13           1
 N asparagine          3.3         25           2
 P proline             6.1         46           3
 Q glutamine           5.0         38           2
 R arginine            6.3         48           2
 S serine              6.7         51           2
 T threonine           4.6         35           2
 V valine              5.3         40           3
 W tryptophan          0.7          5           1
 Y tyrosine            3.2         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   activating signal cointegrator 1 complex subunit 2 [... 
RSF1                  0.013   remodeling and spacing factor 1 
NCL                   0.011   nucleolin 
CHGB                  0.010   chromogranin B precursor 
NPM1                  0.010   nucleophosmin 1 isoform 1 
NPM1                  0.009   nucleophosmin 1 isoform 3 
TTBK1                 0.009   tau tubulin kinase 1 
SRRM2                 0.009   splicing coactivator subunit SRm300 
CROP                  0.008   cisplatin resistance-associated overexpressed protei...
CROP                  0.008   cisplatin resistance-associated overexpressed protei...
LOC100133692          0.007   PREDICTED: similar to cell division cycle 2-like 1 ...
PRPF38A               0.007   PRP38 pre-mRNA processing factor 38 (yeast) domain c...
MTERFD2               0.007   MTERF domain containing 2 
TULP1                 0.007   tubby like protein 1 
KIAA1429              0.007   hypothetical protein LOC25962 isoform 1 
KIAA1429              0.007   hypothetical protein LOC25962 isoform 2 
RBM16                 0.007   RNA-binding motif protein 16 
MDN1                  0.007   MDN1, midasin homolog 
SKAP1                 0.007   src kinase associated phosphoprotein 1 isoform 2 [H...
ESF1                  0.007   ABT1-associated protein 
SKAP1                 0.007   src kinase associated phosphoprotein 1 isoform 1 [H...
UPF3B                 0.006   UPF3 regulator of nonsense transcripts homolog B iso...
RBM28                 0.006   RNA binding motif protein 28 
UPF3B                 0.006   UPF3 regulator of nonsense transcripts homolog B iso...
SAFB                  0.006   scaffold attachment factor B 
FUSSEL18              0.006   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.006   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.006   PREDICTED: functional smad suppressing element 18 [...
PES1                  0.006   pescadillo homolog 1, containing BRCT domain 
KIAA1529              0.006   hypothetical protein LOC57653 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press