Guide to the Human Genome
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Name: TPX2 Sequence: fasta or formatted (747aa) NCBI GI: 20127519
Description:

TPX2, microtubule-associated protein homolog

Referenced in:

Spindle, M phase, and Meiosis
Tubulins and Microtubules

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         45           2
 C cysteine            1.5         11           1
 D aspartate           3.7         28           2
 E glutamate          11.6         87           3
 F phenylalanine       3.7         28           1
 G glycine             2.9         22           2
 H histidine           2.3         17           2
 I isoleucine          4.0         30           2
 K lysine             13.3         99           3
 L leucine             7.4         55           2
 M methionine          1.2          9           1
 N asparagine          3.1         23           2
 P proline             7.9         59           2
 Q glutamine           6.4         48           2
 R arginine            5.6         42           2
 S serine              6.4         48           2
 T threonine           5.1         38           1
 V valine              6.2         46           2
 W tryptophan          0.3          2           1
 Y tyrosine            1.3         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TPX2, microtubule-associated protein homolog 
TCHH                  0.027   trichohyalin 
NEFH                  0.027   neurofilament, heavy polypeptide 200kDa 
TTN                   0.025   titin isoform N2-A 
CALD1                 0.020   caldesmon 1 isoform 1 
MYH11                 0.018   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.018   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.018   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.018   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
GOLGA4                0.017   golgi autoantigen, golgin subfamily a, 4 
CXorf15               0.016   gamma-taxilin 
PLEC1                 0.016   plectin 1 isoform 11 
PLEC1                 0.016   plectin 1 isoform 10 
PLEC1                 0.016   plectin 1 isoform 8 
PLEC1                 0.016   plectin 1 isoform 7 
PLEC1                 0.016   plectin 1 isoform 6 
PLEC1                 0.016   plectin 1 isoform 3 
PLEC1                 0.016   plectin 1 isoform 2 
PLEC1                 0.016   plectin 1 isoform 1 
TRDN                  0.016   triadin 
CALD1                 0.016   caldesmon 1 isoform 4 
CALD1                 0.016   caldesmon 1 isoform 3 
HIP1R                 0.015   huntingtin interacting protein-1-related 
LOC100294412          0.015   PREDICTED: similar to KIAA0655 protein 
MICALCL               0.014   MICAL C-terminal like 
LOC283685             0.014   PREDICTED: golgi autoantigen, golgin subfamily a-li...
NEXN                  0.014   nexilin (F actin binding protein) 
INCENP                0.014   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.014   inner centromere protein antigens 135/155kDa isofor...
LOC283685             0.014   PREDICTED: golgi autoantigen, golgin subfamily a-li...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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