Guide to the Human Genome
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Name: LOC100294412 Sequence: fasta or formatted (1048aa) NCBI GI: 239750456
Description:

PREDICTED: similar to KIAA0655 protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6        111           3
 C cysteine            1.3         14           1
 D aspartate           4.7         49           2
 E glutamate          10.0        105           2
 F phenylalanine       2.0         21           2
 G glycine             5.3         56           2
 H histidine           3.1         32           1
 I isoleucine          3.2         34           2
 K lysine              5.5         58           2
 L leucine            12.1        127           3
 M methionine          1.5         16           2
 N asparagine          2.0         21           2
 P proline             3.8         40           2
 Q glutamine           7.2         75           2
 R arginine            7.1         74           2
 S serine              7.4         78           2
 T threonine           4.6         48           2
 V valine              6.6         69           3
 W tryptophan          0.5          5           1
 Y tyrosine            1.4         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to KIAA0655 protein 
HIP1R                 0.896   huntingtin interacting protein-1-related 
HIP1                  0.407   huntingtin interacting protein 1 
TLN1                  0.042   talin 1 
TLN2                  0.041   talin 2 
CROCC                 0.033   ciliary rootlet coiled-coil 
CEP250                0.033   centrosomal protein 2 
MYH10                 0.029   myosin, heavy polypeptide 10, non-muscle 
NUMA1                 0.028   nuclear mitotic apparatus protein 1 
MYH9                  0.027   myosin, heavy polypeptide 9, non-muscle 
TCHH                  0.027   trichohyalin 
GOLGA3                0.027   Golgi autoantigen, golgin subfamily a, 3 
MYH2                  0.027   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.027   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH14                 0.027   myosin, heavy chain 14 isoform 1 
MYH14                 0.027   myosin, heavy chain 14 isoform 2 
MYH14                 0.027   myosin, heavy chain 14 isoform 3 
MYH3                  0.027   myosin, heavy chain 3, skeletal muscle, embryonic [H...
PLEC1                 0.027   plectin 1 isoform 11 
PLEC1                 0.027   plectin 1 isoform 10 
PLEC1                 0.027   plectin 1 isoform 8 
PLEC1                 0.027   plectin 1 isoform 7 
PLEC1                 0.027   plectin 1 isoform 6 
PLEC1                 0.027   plectin 1 isoform 3 
PLEC1                 0.027   plectin 1 isoform 2 
PLEC1                 0.027   plectin 1 isoform 1 
LRRC45                0.027   leucine rich repeat containing 45 
MYH11                 0.027   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.027   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.027   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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