Guide to the Human Genome
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Name: CXorf15 Sequence: fasta or formatted (528aa) NCBI GI: 8922940
Description:

gamma-taxilin

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         43           2
 C cysteine            1.7          9           1
 D aspartate           3.4         18           1
 E glutamate          13.8         73           4
 F phenylalanine       1.7          9           1
 G glycine             4.2         22           3
 H histidine           2.5         13           1
 I isoleucine          4.2         22           2
 K lysine             10.8         57           2
 L leucine            10.2         54           3
 M methionine          2.5         13           1
 N asparagine          4.0         21           3
 P proline             2.3         12           2
 Q glutamine           8.5         45           3
 R arginine            6.4         34           3
 S serine              5.5         29           2
 T threonine           5.5         29           2
 V valine              3.2         17           1
 W tryptophan          0.4          2           1
 Y tyrosine            1.1          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma-taxilin 
TXLNA                 0.465   taxilin 
TXLNB                 0.387   taxilin beta 
CYorf15B              0.207   lipopolysaccaride-specific response 5-like protein [...
CYorf15A              0.171   hypothetical protein LOC246126 
MYH9                  0.055   myosin, heavy polypeptide 9, non-muscle 
HOOK1                 0.055   hook homolog 1 
MYH10                 0.054   myosin, heavy polypeptide 10, non-muscle 
ROCK1                 0.053   Rho-associated, coiled-coil containing protein kinase...
CCDC88A               0.051   coiled-coil domain containing 88A isoform 1 
CGNL1                 0.051   cingulin-like 1 
LOC283767             0.050   golgi autoantigen, golgin subfamily a-like 
MYH3                  0.050   myosin, heavy chain 3, skeletal muscle, embryonic [H...
CCDC88A               0.050   coiled-coil domain containing 88A isoform 2 
LOC100132816          0.049   PREDICTED: similar to Putative golgin subfamily A m...
LOC440243             0.049   PREDICTED: Putative golgin subfamily A member 6-lik...
MYH11                 0.049   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.049   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.049   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.049   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
CEP250                0.048   centrosomal protein 2 
LOC400352             0.048   PREDICTED: similar to Putative golgin subfamily A m...
LOC727832             0.047   golgi autoantigen, golgin subfamily a-like 
PMFBP1                0.047   polyamine modulated factor 1 binding protein 1 isof...
PMFBP1                0.047   polyamine modulated factor 1 binding protein 1 isof...
CENPF                 0.047   centromere protein F 
WDR87                 0.046   NYD-SP11 protein 
MYH8                  0.046   myosin, heavy chain 8, skeletal muscle, perinatal [...
LOC283685             0.045   PREDICTED: golgi autoantigen, golgin subfamily a-li...
CCDC18                0.045   sarcoma antigen NY-SAR-41 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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