Guide to the Human Genome
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Name: SUFU Sequence: fasta or formatted (484aa) NCBI GI: 19923479
Description:

suppressor of fused

Referenced in:

Hedgehog and Related Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         26           2
 C cysteine            1.2          6           1
 D aspartate           5.6         27           2
 E glutamate           8.1         39           2
 F phenylalanine       3.9         19           1
 G glycine             7.9         38           2
 H histidine           3.5         17           1
 I isoleucine          5.2         25           2
 K lysine              3.1         15           2
 L leucine            10.1         49           2
 M methionine          1.7          8           1
 N asparagine          2.5         12           1
 P proline             9.5         46           2
 Q glutamine           4.1         20           2
 R arginine            5.8         28           2
 S serine              7.6         37           2
 T threonine           6.0         29           1
 V valine              4.8         23           2
 W tryptophan          1.9          9           1
 Y tyrosine            2.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   suppressor of fused 
AP4E1                 0.013   adaptor-related protein complex 4, epsilon 1 subunit...
TBX21                 0.012   T-box 21 
LOC100291760          0.012   PREDICTED: hypothetical protein XP_002344912 
LOC100290674          0.012   PREDICTED: hypothetical protein XP_002347612 
LOC100288732          0.012   PREDICTED: hypothetical protein XP_002343433 
OTUD1                 0.010   OTU domain containing 1 
ZFPM1                 0.010   zinc finger protein, multitype 1 
COL14A1               0.010   collagen, type XIV, alpha 1 
COL4A5                0.009   type IV collagen alpha 5 isoform 2 precursor 
COL4A5                0.009   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.009   type IV collagen alpha 5 isoform 3 precursor 
COL17A1               0.009   alpha 1 type XVII collagen 
TMEM158               0.009   Ras-induced senescence 1 
COLEC12               0.009   collectin sub-family member 12 
CPSF6                 0.008   cleavage and polyadenylation specific factor 6, 68 ...
KRTAP4-6              0.008   PREDICTED: keratin associated protein 4.6 
FASTK                 0.008   Fas-activated serine/threonine kinase isoform 4 [Hom...
EMID2                 0.008   EMI domain containing 2 
COL15A1               0.008   alpha 1 type XV collagen precursor 
VASP                  0.007   vasodilator-stimulated phosphoprotein 
C21orf70              0.007   hypothetical protein LOC85395 
LOC100133554          0.007   PREDICTED: hypothetical protein 
LOC100133554          0.007   PREDICTED: hypothetical protein 
TNRC18                0.007   trinucleotide repeat containing 18 
LOC100133142          0.007   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100133142          0.007   PREDICTED: similar to zinc finger protein 208 [Homo...
PCDH15                0.007   protocadherin 15 isoform CD1-4 precursor 
PCDH15                0.007   protocadherin 15 isoform CD1-10 precursor 
PCDH15                0.007   protocadherin 15 isoform CD1-9 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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