Search of human proteins with 19913385

Search of human proteins with 19913385

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|19913385 G6B protein isoform G6b-G precursor [Homo sapiens]
         (222 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|19913385 G6B protein isoform G6b-G precursor [Homo sapiens]        466   e-132
gi|19913373 G6B protein isoform G6b-A precursor [Homo sapiens]        446   e-126
gi|19913375 G6B protein isoform G6b-B precursor [Homo sapiens]        379   e-105
gi|19913379 G6B protein isoform G6b-D precursor [Homo sapiens]        333   5e-92
gi|19913377 G6B protein isoform G6b-C precursor [Homo sapiens]        288   2e-78
gi|19913381 G6B protein isoform G6b-E precursor [Homo sapiens]        286   1e-77
gi|239752239 PREDICTED: hypothetical protein XP_002348169 [Homo ...    32   0.56 
gi|239746759 PREDICTED: hypothetical protein XP_002343836 [Homo ...    32   0.56 
gi|71143119 signal-induced proliferation-associated 1 like 3 [Ho...    32   0.56 
gi|56711322 ring finger protein 43 [Homo sapiens]                      31   0.74 
gi|90652861 protein-tyrosine-phosphatase non-receptor 5 isoform ...    31   0.96 
gi|90652859 protein-tyrosine-phosphatase non-receptor 5 isoform ...    31   0.96 
gi|90652853 protein-tyrosine-phosphatase non-receptor 5 isoform ...    31   0.96 
gi|239755924 PREDICTED: hypothetical protein [Homo sapiens]            31   0.96 
gi|239750442 PREDICTED: hypothetical protein XP_002347364 [Homo ...    31   0.96 
gi|239744744 PREDICTED: hypothetical protein XP_002343250 [Homo ...    31   0.96 
gi|50345997 E1A binding protein p300 [Homo sapiens]                    30   1.3  
gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]            30   1.3  
gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo sa...    30   1.3  
gi|153791630 bromodomain and WD repeat domain containing 3 [Homo...    30   1.3  
gi|189181724 proteoglycan 4 isoform D [Homo sapiens]                   30   1.6  
gi|189181722 proteoglycan 4 isoform C [Homo sapiens]                   30   1.6  
gi|189181720 proteoglycan 4 isoform B [Homo sapiens]                   30   1.6  
gi|67190163 proteoglycan 4 isoform A [Homo sapiens]                    30   1.6  
gi|169164209 PREDICTED: hypothetical protein [Homo sapiens]            30   1.6  
gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo ...    30   1.6  
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    30   1.6  
gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens]            30   1.6  
gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens]         30   1.6  
gi|170932550 FLT3-interacting zinc finger 1 [Homo sapiens]             30   1.6  

>gi|19913385 G6B protein isoform G6b-G precursor [Homo sapiens]
          Length = 222

 Score =  466 bits (1198), Expect = e-132
 Identities = 222/222 (100%), Positives = 222/222 (100%)

Query: 1   MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
           MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR
Sbjct: 1   MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60

Query: 61  RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120
           RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL
Sbjct: 61  RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120

Query: 121 HVLGDRTYCKAPGPTHGSVYPQLLIPLLGAGLVLGLGALGLVWWLHRRLPPQPIRPLPRF 180
           HVLGDRTYCKAPGPTHGSVYPQLLIPLLGAGLVLGLGALGLVWWLHRRLPPQPIRPLPRF
Sbjct: 121 HVLGDRTYCKAPGPTHGSVYPQLLIPLLGAGLVLGLGALGLVWWLHRRLPPQPIRPLPRF 180

Query: 181 ALSPPHSSTCENRAPEASKGGRAQDSRGPGPGTGKGMGMGRG 222
           ALSPPHSSTCENRAPEASKGGRAQDSRGPGPGTGKGMGMGRG
Sbjct: 181 ALSPPHSSTCENRAPEASKGGRAQDSRGPGPGTGKGMGMGRG 222


>gi|19913373 G6B protein isoform G6b-A precursor [Homo sapiens]
          Length = 237

 Score =  446 bits (1148), Expect = e-126
 Identities = 213/213 (100%), Positives = 213/213 (100%)

Query: 1   MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
           MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR
Sbjct: 1   MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60

Query: 61  RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120
           RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL
Sbjct: 61  RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120

Query: 121 HVLGDRTYCKAPGPTHGSVYPQLLIPLLGAGLVLGLGALGLVWWLHRRLPPQPIRPLPRF 180
           HVLGDRTYCKAPGPTHGSVYPQLLIPLLGAGLVLGLGALGLVWWLHRRLPPQPIRPLPRF
Sbjct: 121 HVLGDRTYCKAPGPTHGSVYPQLLIPLLGAGLVLGLGALGLVWWLHRRLPPQPIRPLPRF 180

Query: 181 ALSPPHSSTCENRAPEASKGGRAQDSRGPGPGT 213
           ALSPPHSSTCENRAPEASKGGRAQDSRGPGPGT
Sbjct: 181 ALSPPHSSTCENRAPEASKGGRAQDSRGPGPGT 213


>gi|19913375 G6B protein isoform G6b-B precursor [Homo sapiens]
          Length = 241

 Score =  379 bits (973), Expect = e-105
 Identities = 181/181 (100%), Positives = 181/181 (100%)

Query: 1   MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
           MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR
Sbjct: 1   MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60

Query: 61  RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120
           RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL
Sbjct: 61  RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120

Query: 121 HVLGDRTYCKAPGPTHGSVYPQLLIPLLGAGLVLGLGALGLVWWLHRRLPPQPIRPLPRF 180
           HVLGDRTYCKAPGPTHGSVYPQLLIPLLGAGLVLGLGALGLVWWLHRRLPPQPIRPLPRF
Sbjct: 121 HVLGDRTYCKAPGPTHGSVYPQLLIPLLGAGLVLGLGALGLVWWLHRRLPPQPIRPLPRF 180

Query: 181 A 181
           A
Sbjct: 181 A 181


>gi|19913379 G6B protein isoform G6b-D precursor [Homo sapiens]
          Length = 193

 Score =  333 bits (855), Expect = 5e-92
 Identities = 169/213 (79%), Positives = 169/213 (79%), Gaps = 44/213 (20%)

Query: 1   MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
           MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR
Sbjct: 1   MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60

Query: 61  RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120
           RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL
Sbjct: 61  RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120

Query: 121 HVLGDRTYCKAPGPTHGSVYPQLLIPLLGAGLVLGLGALGLVWWLHRRLPPQPIRPLPRF 180
           HVLGDRTYCKAPGPTH                                            
Sbjct: 121 HVLGDRTYCKAPGPTH-------------------------------------------- 136

Query: 181 ALSPPHSSTCENRAPEASKGGRAQDSRGPGPGT 213
           ALSPPHSSTCENRAPEASKGGRAQDSRGPGPGT
Sbjct: 137 ALSPPHSSTCENRAPEASKGGRAQDSRGPGPGT 169


>gi|19913377 G6B protein isoform G6b-C precursor [Homo sapiens]
          Length = 217

 Score =  288 bits (738), Expect = 2e-78
 Identities = 137/138 (99%), Positives = 138/138 (100%)

Query: 1   MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
           MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR
Sbjct: 1   MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60

Query: 61  RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120
           RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL
Sbjct: 61  RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120

Query: 121 HVLGDRTYCKAPGPTHGS 138
           HVLGDRTYCKAPGPTHG+
Sbjct: 121 HVLGDRTYCKAPGPTHGA 138


>gi|19913381 G6B protein isoform G6b-E precursor [Homo sapiens]
          Length = 197

 Score =  286 bits (731), Expect = 1e-77
 Identities = 136/136 (100%), Positives = 136/136 (100%)

Query: 1   MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60
           MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR
Sbjct: 1   MAVFLQLLPLLLSRAQGNPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGR 60

Query: 61  RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120
           RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL
Sbjct: 61  RPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVL 120

Query: 121 HVLGDRTYCKAPGPTH 136
           HVLGDRTYCKAPGPTH
Sbjct: 121 HVLGDRTYCKAPGPTH 136


>gi|239752239 PREDICTED: hypothetical protein XP_002348169 [Homo
           sapiens]
          Length = 150

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 178 PRFALSP--PHSSTCENRAPEASKGGRAQDSRGPGPGTGKGMGMGRG 222
           PR+ LS   P S+  ++ +    KG R   + GPGP  G+G G G G
Sbjct: 39  PRWMLSSQSPTSNLLQSCSGFCWKGRRGPGAPGPGPDAGEGSGDGEG 85


>gi|239746759 PREDICTED: hypothetical protein XP_002343836 [Homo
           sapiens]
          Length = 150

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 178 PRFALSP--PHSSTCENRAPEASKGGRAQDSRGPGPGTGKGMGMGRG 222
           PR+ LS   P S+  ++ +    KG R   + GPGP  G+G G G G
Sbjct: 39  PRWMLSSQSPTSNLLQSCSGFCWKGRRGPGAPGPGPDAGEGSGDGEG 85


>gi|71143119 signal-induced proliferation-associated 1 like 3 [Homo
            sapiens]
          Length = 1781

 Score = 31.6 bits (70), Expect = 0.56
 Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 7/36 (19%)

Query: 51   PACKGLSKGRRPILWASSSGTPT-------VPPLQP 79
            PA  G SKG RP L++S S TPT        PP QP
Sbjct: 1367 PAVAGQSKGYRPKLYSSGSSTPTGLAGGSRDPPRQP 1402


>gi|56711322 ring finger protein 43 [Homo sapiens]
          Length = 783

 Score = 31.2 bits (69), Expect = 0.74
 Identities = 48/188 (25%), Positives = 71/188 (37%), Gaps = 35/188 (18%)

Query: 25  GRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGRRPILWASSSGTPTVPPLQPFV-GR 83
           G   D V ++C  +S  ++ V   S   C  LS    P+++ S  G P    +QP V  R
Sbjct: 473 GSSSDSV-VNCTDIS--LQGVHGSSSTFCSSLSSDFDPLVYCSPKGDPQRVDMQPSVTSR 529

Query: 84  LRSLDSGIRRLELLLSAGDSGTFFCKGRHEDESRTVLHVLGDRTYCKAPGPTHGSVYPQL 143
            RSLDS +   E  +S   S   + + RH    +        + + + PGP  G   PQ 
Sbjct: 530 PRSLDSVVPTGETQVS---SHVHYHRHRHHHYKKRF------QWHGRKPGPETG--VPQS 578

Query: 144 LIPLLGAGLVLGLGALGLVWWLHRRLPPQPIRPLPRFALSPPHSSTCENRAPEASKGGRA 203
             P+                    R  PQP  P P   ++  +S+    R     +  RA
Sbjct: 579 RPPI-------------------PRTQPQPEPPSPDQQVTRSNSAAPSGRLSN-PQCPRA 618

Query: 204 QDSRGPGP 211
                PGP
Sbjct: 619 LPEPAPGP 626


>gi|90652861 protein-tyrosine-phosphatase non-receptor 5 isoform b
           [Homo sapiens]
          Length = 533

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 4/38 (10%)

Query: 141 PQLLIPLLGAGLVLGLGALGLVWWLHRRLPPQPIRPLP 178
           P LL+  L  GLVL      LVW L  R PP+P  PLP
Sbjct: 112 PSLLLVFLSVGLVL---VTTLVWHL-LRTPPEPPTPLP 145


>gi|90652859 protein-tyrosine-phosphatase non-receptor 5 isoform a
           [Homo sapiens]
          Length = 565

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 4/38 (10%)

Query: 141 PQLLIPLLGAGLVLGLGALGLVWWLHRRLPPQPIRPLP 178
           P LL+  L  GLVL      LVW L  R PP+P  PLP
Sbjct: 144 PSLLLVFLSVGLVL---VTTLVWHL-LRTPPEPPTPLP 177


>gi|90652853 protein-tyrosine-phosphatase non-receptor 5 isoform a
           [Homo sapiens]
          Length = 565

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 4/38 (10%)

Query: 141 PQLLIPLLGAGLVLGLGALGLVWWLHRRLPPQPIRPLP 178
           P LL+  L  GLVL      LVW L  R PP+P  PLP
Sbjct: 144 PSLLLVFLSVGLVL---VTTLVWHL-LRTPPEPPTPLP 177


>gi|239755924 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 102

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 172 QPIRPLPRFALSPPHSSTCEN--RAPEASKGGRAQDSR 207
           QP RPLPR   +PP +    N   AP A+ G RA   R
Sbjct: 38  QPRRPLPRLRRAPPPAPALGNGGLAPRATSGSRAARQR 75


>gi|239750442 PREDICTED: hypothetical protein XP_002347364 [Homo
           sapiens]
          Length = 102

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 172 QPIRPLPRFALSPPHSSTCEN--RAPEASKGGRAQDSR 207
           QP RPLPR   +PP +    N   AP A+ G RA   R
Sbjct: 38  QPRRPLPRLRRAPPPAPALGNGGLAPRATSGSRAARQR 75


>gi|239744744 PREDICTED: hypothetical protein XP_002343250 [Homo
           sapiens]
          Length = 102

 Score = 30.8 bits (68), Expect = 0.96
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 172 QPIRPLPRFALSPPHSSTCEN--RAPEASKGGRAQDSR 207
           QP RPLPR   +PP +    N   AP A+ G RA   R
Sbjct: 38  QPRRPLPRLRRAPPPAPALGNGGLAPRATSGSRAARQR 75


>gi|50345997 E1A binding protein p300 [Homo sapiens]
          Length = 2414

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 171  PQPIRPLPRFALSPPHSSTCENRAPEASKGGRAQDSRGPGPG 212
            PQP+ P PR    PPHSS      P+ S    +  +  P PG
Sbjct: 2310 PQPV-PSPRPQSQPPHSSPSPRMQPQPSPHHVSPQTSSPHPG 2350


>gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 297

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 162 VWWLHRRLPPQPI--RPLPRFALSPPHSSTCENRAPEASKGGRAQDSRGPGPGTGKGMGM 219
           VW L    PPQP    PL  +  SPP +S    RA + S+G   +    P P  G    M
Sbjct: 13  VWVLGGAAPPQPQPRSPLSPWQASPPATSP---RAWQLSRGPGGRSPLPPAPSRGPATCM 69

Query: 220 G 220
           G
Sbjct: 70  G 70


>gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo
           sapiens]
          Length = 601

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 178 PRFALSPPHSSTCENRAPEASKGGRAQDSRGPGPGTGKG 216
           P    +P   ST  + + +A  G R     GP PG G+G
Sbjct: 112 PASPATPAQPSTSGSASSDAGSGSRRSSGGGPSPGAGEG 150


>gi|153791630 bromodomain and WD repeat domain containing 3 [Homo
            sapiens]
          Length = 1802

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 13/24 (54%), Positives = 16/24 (66%)

Query: 199  KGGRAQDSRGPGPGTGKGMGMGRG 222
            +GGR + SRG G G  +G G GRG
Sbjct: 1689 RGGRGRGSRGRGGGGTRGRGRGRG 1712


>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
          Length = 1270

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 6/51 (11%)

Query: 170 PPQPIRPLPRFALSP-----PHSSTCENRAPEASKGGRAQDSRGPGPGTGK 215
           P  P +P P+  L+P     P S+TC+  AP   KG      + P P T K
Sbjct: 588 PTTPKKPAPK-ELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPK 637


>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
          Length = 1311

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 6/51 (11%)

Query: 170 PPQPIRPLPRFALSP-----PHSSTCENRAPEASKGGRAQDSRGPGPGTGK 215
           P  P +P P+  L+P     P S+TC+  AP   KG      + P P T K
Sbjct: 629 PTTPKKPAPK-ELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPK 678


>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
          Length = 1363

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 6/51 (11%)

Query: 170 PPQPIRPLPRFALSP-----PHSSTCENRAPEASKGGRAQDSRGPGPGTGK 215
           P  P +P P+  L+P     P S+TC+  AP   KG      + P P T K
Sbjct: 681 PTTPKKPAPK-ELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPK 730


>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
          Length = 1404

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 6/51 (11%)

Query: 170 PPQPIRPLPRFALSP-----PHSSTCENRAPEASKGGRAQDSRGPGPGTGK 215
           P  P +P P+  L+P     P S+TC+  AP   KG      + P P T K
Sbjct: 722 PTTPKKPAPK-ELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPK 771


>gi|169164209 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 179

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 12/65 (18%)

Query: 170 PPQPIRPLPRFA----------LSPPHSSTCENRAPEASKGGR--AQDSRGPGPGTGKGM 217
           PP P RP P  +          L P H+ST     P  ++        S G GPG    +
Sbjct: 35  PPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSPPPRARRTEPAVPPSCGSGPGAAGAL 94

Query: 218 GMGRG 222
            MG G
Sbjct: 95  RMGLG 99


>gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo
           sapiens]
          Length = 179

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 12/65 (18%)

Query: 170 PPQPIRPLPRFA----------LSPPHSSTCENRAPEASKGGR--AQDSRGPGPGTGKGM 217
           PP P RP P  +          L P H+ST     P  ++        S G GPG    +
Sbjct: 35  PPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSPPPRARRTEPAVPPSCGSGPGAAGAL 94

Query: 218 GMGRG 222
            MG G
Sbjct: 95  RMGLG 99


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 24/82 (29%), Positives = 28/82 (34%), Gaps = 30/82 (36%)

Query: 170 PPQPIRPL-------PRFALSPPHSSTCENRAP-----------------------EASK 199
           PP P RPL       P   L PP   +  + AP                        A+ 
Sbjct: 107 PPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAAL 166

Query: 200 GGRAQDSRGPGPGTGKGMGMGR 221
             RA    GPGPG G G G G+
Sbjct: 167 AARAGPGPGPGPGPGPGPGPGK 188


>gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens]
          Length = 4242

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 37/135 (27%), Positives = 51/135 (37%), Gaps = 12/135 (8%)

Query: 55   GLSKGRR--PILWASSSGTPTVPPLQPFVGRLRSLD--SGIRRLELLLSAGDSGTFFCKG 110
            GLS  +R  PI  A S+  P    L P +G L   +  S   RL   ++ G   +F  + 
Sbjct: 3423 GLSGRKRLGPIS-ADSTTAPLEKELPPHLGELTVAEETSSSLRLSWTVAQGPFDSFVVQY 3481

Query: 111  RHEDESRTVLHVLGDRTYCKAPGPTHGSVYPQLLIPLLGAGLVLGLGALGLVWWLHRRLP 170
            R  D     + V  D+          G  Y  LL  LLG   +  + ALG+         
Sbjct: 3482 RDTDGQPRAVPVAADQRTVTVEDLEPGKKYKFLLYGLLGGKRLGPVSALGMT-------A 3534

Query: 171  PQPIRPLPRFALSPP 185
            P+   P P  A   P
Sbjct: 3535 PEEDTPAPELAPEAP 3549


>gi|118600983 chondroitin sulfate proteoglycan 3 [Homo sapiens]
          Length = 1321

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 4/48 (8%)

Query: 34  SCGGVSHPIRWVWAPSF--PACKGLSKGRRPILWASSSGTPTVPPLQP 79
           S GG S P  W+W P+   P+  G S  R P+L    +  P+  P  P
Sbjct: 555 SAGGKSSPEPWLWPPTMVPPSISGHS--RAPVLELEKAEGPSARPATP 600


>gi|170932550 FLT3-interacting zinc finger 1 [Homo sapiens]
          Length = 496

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 166 HRRLPPQPIRPLPRF-ALSPPHSSTCENRAPEASKGGRAQDSRGPGP-GTGKGMG 218
           HR + P P++P P   ALS P  S C N  P +  GG      G GP G G G+G
Sbjct: 130 HRGVLPSPLQPGPGLPALSAP-CSVCCNVGPCSVCGGSGAGG-GEGPEGAGAGLG 182


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.141    0.463 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,817,816
Number of Sequences: 37866
Number of extensions: 683387
Number of successful extensions: 3374
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 3217
Number of HSP's gapped (non-prelim): 205
length of query: 222
length of database: 18,247,518
effective HSP length: 98
effective length of query: 124
effective length of database: 14,536,650
effective search space: 1802544600
effective search space used: 1802544600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.