Guide to the Human Genome
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Name: PTPN5 Sequence: fasta or formatted (565aa) NCBI GI: 90652859
Description:

protein-tyrosine-phosphatase non-receptor 5 isoform a

Referenced in:

Protein Tyrosine Phosphatases

Other entries for this name:
alt mRNA [565aa] protein-tyrosine-phosphatase non-receptor 5 isoform a
alt prot [533aa] protein-tyrosine-phosphatase non-receptor 5 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         29           2
 C cysteine            2.8         16           2
 D aspartate           5.1         29           2
 E glutamate           9.0         51           2
 F phenylalanine       2.8         16           2
 G glycine             5.8         33           2
 H histidine           2.7         15           2
 I isoleucine          4.4         25           2
 K lysine              3.0         17           1
 L leucine            10.3         58           3
 M methionine          2.7         15           1
 N asparagine          2.3         13           1
 P proline             9.0         51           6
 Q glutamine           5.1         29           2
 R arginine            5.1         29           2
 S serine              7.6         43           2
 T threonine           5.7         32           2
 V valine              6.4         36           2
 W tryptophan          1.9         11           1
 Y tyrosine            3.0         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein-tyrosine-phosphatase non-receptor 5 isoform ... 
PTPN5                 1.000   protein-tyrosine-phosphatase non-receptor 5 isoform ...
PTPN5                 0.928   protein-tyrosine-phosphatase non-receptor 5 isoform ...
PTPRR                 0.335   protein tyrosine phosphatase, receptor type, R isofor...
PTPRR                 0.332   protein tyrosine phosphatase, receptor type, R isofo...
PTPN7                 0.267   protein tyrosine phosphatase, non-receptor type 7 is...
PTPN7                 0.267   protein tyrosine phosphatase, non-receptor type 7 is...
PTPRK                 0.143   protein tyrosine phosphatase, receptor type, K isofo...
PTPRT                 0.143   protein tyrosine phosphatase, receptor type, T isof...
PTPRT                 0.143   protein tyrosine phosphatase, receptor type, T isof...
PTPRM                 0.137   protein tyrosine phosphatase, receptor type, M isof...
PTPRM                 0.137   protein tyrosine phosphatase, receptor type, M isof...
PTPRK                 0.137   protein tyrosine phosphatase, receptor type, K isof...
PTPRF                 0.135   protein tyrosine phosphatase, receptor type, F isof...
PTPRF                 0.135   protein tyrosine phosphatase, receptor type, F isof...
PTPRG                 0.131   protein tyrosine phosphatase, receptor type, G prec...
PTPN6                 0.131   protein tyrosine phosphatase, non-receptor type 6 is...
PTPN6                 0.131   protein tyrosine phosphatase, non-receptor type 6 is...
PTPN6                 0.131   protein tyrosine phosphatase, non-receptor type 6 is...
PTPN11                0.130   protein tyrosine phosphatase, non-receptor type 11 [...
PTPRS                 0.130   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.130   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.130   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.130   protein tyrosine phosphatase, receptor type, sigma ...
PTPRD                 0.129   protein tyrosine phosphatase, receptor type, D isof...
PTPRD                 0.129   protein tyrosine phosphatase, receptor type, D isofor...
PTPRD                 0.129   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.129   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.129   protein tyrosine phosphatase, receptor type, D isofo...
PTPRZ1                0.127   protein tyrosine phosphatase, receptor-type, zeta1 p...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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