RORA 11510

Name: RORA	Sequence: fasta or formatted (468aa)		NCBI GI: 19743905
Description: RAR-related orphan receptor A isoform d		Referenced in: Circadian Rhythms Nuclear Receptors
Other entries for this name: alt prot [556aa] RAR-related orphan receptor A isoform b alt prot [523aa] RAR-related orphan receptor A isoform a alt prot [548aa] RAR-related orphan receptor A isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 28 2 C cysteine 4.1 19 1 D aspartate 5.1 24 2 E glutamate 7.1 33 2 F phenylalanine 5.3 25 2 G glycine 4.9 23 1 H histidine 2.8 13 1 I isoleucine 6.8 32 2 K lysine 6.4 30 2 L leucine 8.3 39 2 M methionine 3.0 14 2 N asparagine 3.2 15 2 P proline 3.8 18 2 Q glutamine 7.9 37 4 R arginine 4.7 22 2 S serine 7.5 35 2 T threonine 4.5 21 1 V valine 4.5 21 2 W tryptophan 0.6 3 1 Y tyrosine 3.4 16 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RAR-related orphan receptor A isoform d RORA 0.983 RAR-related orphan receptor A isoform c RORA 0.982 RAR-related orphan receptor A isoform b RORA 0.979 RAR-related orphan receptor A isoform a RORB 0.601 RAR-related orphan receptor B RORC 0.465 RAR-related orphan receptor C isoform b RORC 0.462 RAR-related orphan receptor C isoform a NR1D2 0.127 nuclear receptor subfamily 1, group D, member 2 iso... NR1D2 0.127 nuclear receptor subfamily 1, group D, member 2 iso... NR2C1 0.115 nuclear receptor subfamily 2, group C, member 1 iso... NR1D1 0.111 nuclear receptor subfamily 1, group D, member 1 [Hom... NR5A2 0.106 nuclear receptor subfamily 5, group A, member 2 isof... NR5A2 0.106 nuclear receptor subfamily 5, group A, member 2 isofo... RARG 0.104 retinoic acid receptor, gamma isoform 2 RARG 0.104 retinoic acid receptor, gamma isoform 1 RARB 0.104 retinoic acid receptor, beta isoform 1 RARA 0.102 retinoic acid receptor, alpha isoform 1 RARA 0.102 retinoic acid receptor, alpha isoform 2 RARA 0.102 retinoic acid receptor, alpha isoform 1 RXRA 0.097 retinoid X receptor, alpha NR2C1 0.095 nuclear receptor subfamily 2, group C, member 1 iso... NR2C1 0.095 nuclear receptor subfamily 2, group C, member 1 isof... PPARG 0.095 peroxisome proliferative activated receptor gamma i... PPARG 0.095 peroxisome proliferative activated receptor gamma is... PPARG 0.095 peroxisome proliferative activated receptor gamma i... PPARG 0.095 peroxisome proliferative activated receptor gamma i... NR2F1 0.095 nuclear receptor subfamily 2, group F, member 1 [Homo... RXRB 0.094 retinoid X receptor, beta NR2F2 0.093 nuclear receptor subfamily 2, group F, member 2 isof... RXRG 0.092 retinoid X receptor, gamma isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.