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Search of human proteins with 197304710
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|197304710 hypothetical protein LOC84310 [Homo sapiens]
(194 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|197304710 hypothetical protein LOC84310 [Homo sapiens] 388 e-108
gi|197304708 hypothetical protein LOC84310 [Homo sapiens] 388 e-108
gi|14150149 hypothetical protein LOC84310 [Homo sapiens] 388 e-108
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ... 36 0.018
gi|33946313 ninein isoform 4 [Homo sapiens] 34 0.068
gi|33946321 ninein isoform 5 [Homo sapiens] 34 0.068
gi|148536871 ninein isoform 1 [Homo sapiens] 34 0.068
gi|148536869 ninein isoform 2 [Homo sapiens] 34 0.068
gi|109150435 ankyrin repeat and zinc finger domain containing 1 ... 34 0.068
gi|109150425 ankyrin repeat and zinc finger domain containing 1 ... 34 0.068
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 34 0.068
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 34 0.068
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 34 0.089
gi|16579828 zinc finger protein 91 [Homo sapiens] 34 0.089
gi|21361517 UBX domain protein 1 [Homo sapiens] 33 0.12
gi|51173873 high-mobility group protein 2-like 1 [Homo sapiens] 33 0.15
gi|189409142 telomeric repeat binding factor 1 isoform 1 [Homo s... 33 0.15
gi|189409140 telomeric repeat binding factor 1 isoform 2 [Homo s... 33 0.15
gi|91208420 bassoon protein [Homo sapiens] 33 0.20
gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens] 33 0.20
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 33 0.20
gi|17158023 hypothetical protein LOC85395 [Homo sapiens] 33 0.20
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 32 0.26
gi|6912326 family with sequence similarity 50, member B [Homo sa... 32 0.26
gi|111607441 hypothetical protein LOC400506 [Homo sapiens] 32 0.34
gi|148746195 trichohyalin [Homo sapiens] 32 0.34
gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithora... 32 0.34
gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens] 32 0.34
gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens] 32 0.34
gi|27436917 misshapen/NIK-related kinase isoform 3 [Homo sapiens] 32 0.34
>gi|197304710 hypothetical protein LOC84310 [Homo sapiens]
Length = 194
Score = 388 bits (996), Expect = e-108
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MAKQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSP 60
MAKQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSP
Sbjct: 1 MAKQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSP 60
Query: 61 EEQRVLERKLKKERKKEERQRLREAGLVAQHPPARRSGAELALDYLCRWAQKHKNWRFQK 120
EEQRVLERKLKKERKKEERQRLREAGLVAQHPPARRSGAELALDYLCRWAQKHKNWRFQK
Sbjct: 61 EEQRVLERKLKKERKKEERQRLREAGLVAQHPPARRSGAELALDYLCRWAQKHKNWRFQK 120
Query: 121 TRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALMRELDEEGSDPPLP 180
TRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALMRELDEEGSDPPLP
Sbjct: 121 TRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALMRELDEEGSDPPLP 180
Query: 181 GRAQRIRQVLQLLS 194
GRAQRIRQVLQLLS
Sbjct: 181 GRAQRIRQVLQLLS 194
>gi|197304708 hypothetical protein LOC84310 [Homo sapiens]
Length = 194
Score = 388 bits (996), Expect = e-108
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MAKQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSP 60
MAKQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSP
Sbjct: 1 MAKQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSP 60
Query: 61 EEQRVLERKLKKERKKEERQRLREAGLVAQHPPARRSGAELALDYLCRWAQKHKNWRFQK 120
EEQRVLERKLKKERKKEERQRLREAGLVAQHPPARRSGAELALDYLCRWAQKHKNWRFQK
Sbjct: 61 EEQRVLERKLKKERKKEERQRLREAGLVAQHPPARRSGAELALDYLCRWAQKHKNWRFQK 120
Query: 121 TRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALMRELDEEGSDPPLP 180
TRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALMRELDEEGSDPPLP
Sbjct: 121 TRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALMRELDEEGSDPPLP 180
Query: 181 GRAQRIRQVLQLLS 194
GRAQRIRQVLQLLS
Sbjct: 181 GRAQRIRQVLQLLS 194
>gi|14150149 hypothetical protein LOC84310 [Homo sapiens]
Length = 194
Score = 388 bits (996), Expect = e-108
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MAKQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSP 60
MAKQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSP
Sbjct: 1 MAKQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSP 60
Query: 61 EEQRVLERKLKKERKKEERQRLREAGLVAQHPPARRSGAELALDYLCRWAQKHKNWRFQK 120
EEQRVLERKLKKERKKEERQRLREAGLVAQHPPARRSGAELALDYLCRWAQKHKNWRFQK
Sbjct: 61 EEQRVLERKLKKERKKEERQRLREAGLVAQHPPARRSGAELALDYLCRWAQKHKNWRFQK 120
Query: 121 TRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALMRELDEEGSDPPLP 180
TRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALMRELDEEGSDPPLP
Sbjct: 121 TRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALMRELDEEGSDPPLP 180
Query: 181 GRAQRIRQVLQLLS 194
GRAQRIRQVLQLLS
Sbjct: 181 GRAQRIRQVLQLLS 194
>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
sapiens]
Length = 956
Score = 36.2 bits (82), Expect = 0.018
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 3 KQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSPEE 62
++K K+ E ++ ++ KK E L + K +A + + E E
Sbjct: 355 EEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQR---LKEERRKER 411
Query: 63 QRVLERKLKKERKKEERQRLRE 84
Q LE KL+++RKKEE +RLRE
Sbjct: 412 QEALEAKLEEKRKKEEEKRLRE 433
Score = 30.0 bits (66), Expect = 1.3
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 13/94 (13%)
Query: 15 KNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSPEEQRVL-----ERK 69
K KL+ E L EA + E A K E E EL +E+R + K
Sbjct: 346 KQLKLRAEREEKEKLKEEAKRAKEEAKKKKEE--------EKELKEKERREKREKDEKEK 397
Query: 70 LKKERKKEERQRLREAGLVAQHPPARRSGAELAL 103
+K+R KEER++ R+ L A+ R+ E L
Sbjct: 398 AEKQRLKEERRKERQEALEAKLEEKRKKEEEKRL 431
>gi|33946313 ninein isoform 4 [Homo sapiens]
Length = 2096
Score = 34.3 bits (77), Expect = 0.068
Identities = 32/141 (22%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 52 LDAEPELSPEEQRVLERKLKKERKKEERQRLREAGLVAQHPPARRSGAELALDYLCRWAQ 111
L+ PE SP+ + + E ++ +E R+ E ++ A + EL + R
Sbjct: 1244 LERIPEASPKYKLLYEDVSRENDCLQEELRMMET----RYDEALENNKELTAEVF-RLQD 1298
Query: 112 KHKNWRFQKTRQTWLLLHM-YDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALMREL 170
+ K + ++ +T+L L YD K+ +E + L+ L+G + +E VQ+ + + E
Sbjct: 1299 ELK--KMEEVTETFLSLEKSYDEVKIENEELNVLVLRLQGKIEKLQESVVQRCDCCLWEA 1356
Query: 171 DEEGSDPPLPGRAQRIRQVLQ 191
E + G ++ Q L+
Sbjct: 1357 SLENLEIEPDGNILQLNQTLE 1377
>gi|33946321 ninein isoform 5 [Homo sapiens]
Length = 2090
Score = 34.3 bits (77), Expect = 0.068
Identities = 32/141 (22%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 52 LDAEPELSPEEQRVLERKLKKERKKEERQRLREAGLVAQHPPARRSGAELALDYLCRWAQ 111
L+ PE SP+ + + E ++ +E R+ E ++ A + EL + R
Sbjct: 1238 LERIPEASPKYKLLYEDVSRENDCLQEELRMMET----RYDEALENNKELTAEVF-RLQD 1292
Query: 112 KHKNWRFQKTRQTWLLLHM-YDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALMREL 170
+ K + ++ +T+L L YD K+ +E + L+ L+G + +E VQ+ + + E
Sbjct: 1293 ELK--KMEEVTETFLSLEKSYDEVKIENEELNVLVLRLQGKIEKLQESVVQRCDCCLWEA 1350
Query: 171 DEEGSDPPLPGRAQRIRQVLQ 191
E + G ++ Q L+
Sbjct: 1351 SLENLEIEPDGNILQLNQTLE 1371
>gi|148536871 ninein isoform 1 [Homo sapiens]
Length = 2046
Score = 34.3 bits (77), Expect = 0.068
Identities = 32/141 (22%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 52 LDAEPELSPEEQRVLERKLKKERKKEERQRLREAGLVAQHPPARRSGAELALDYLCRWAQ 111
L+ PE SP+ + + E ++ +E R+ E ++ A + EL + R
Sbjct: 1238 LERIPEASPKYKLLYEDVSRENDCLQEELRMMET----RYDEALENNKELTAEVF-RLQD 1292
Query: 112 KHKNWRFQKTRQTWLLLHM-YDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALMREL 170
+ K + ++ +T+L L YD K+ +E + L+ L+G + +E VQ+ + + E
Sbjct: 1293 ELK--KMEEVTETFLSLEKSYDEVKIENEELNVLVLRLQGKIEKLQESVVQRCDCCLWEA 1350
Query: 171 DEEGSDPPLPGRAQRIRQVLQ 191
E + G ++ Q L+
Sbjct: 1351 SLENLEIEPDGNILQLNQTLE 1371
>gi|148536869 ninein isoform 2 [Homo sapiens]
Length = 2133
Score = 34.3 bits (77), Expect = 0.068
Identities = 32/141 (22%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 52 LDAEPELSPEEQRVLERKLKKERKKEERQRLREAGLVAQHPPARRSGAELALDYLCRWAQ 111
L+ PE SP+ + + E ++ +E R+ E ++ A + EL + R
Sbjct: 1238 LERIPEASPKYKLLYEDVSRENDCLQEELRMMET----RYDEALENNKELTAEVF-RLQD 1292
Query: 112 KHKNWRFQKTRQTWLLLHM-YDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALMREL 170
+ K + ++ +T+L L YD K+ +E + L+ L+G + +E VQ+ + + E
Sbjct: 1293 ELK--KMEEVTETFLSLEKSYDEVKIENEELNVLVLRLQGKIEKLQESVVQRCDCCLWEA 1350
Query: 171 DEEGSDPPLPGRAQRIRQVLQ 191
E + G ++ Q L+
Sbjct: 1351 SLENLEIEPDGNILQLNQTLE 1371
>gi|109150435 ankyrin repeat and zinc finger domain containing 1
[Homo sapiens]
Length = 726
Score = 34.3 bits (77), Expect = 0.068
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 16/92 (17%)
Query: 3 KQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSPE- 61
+++RK P TE++ +K+ + E LG +G+GS+GE G E EL
Sbjct: 370 REERKKP--TEEEIRKICRDEKEA--LGQNEESPKQGSGSEGE----DGFQVELELVELT 421
Query: 62 -------EQRVLERKLKKERKKEERQRLREAG 86
E VL ++ +++R K+E+ R +EAG
Sbjct: 422 VGTLDLCESEVLPKRRRRKRNKKEKSRDQEAG 453
>gi|109150425 ankyrin repeat and zinc finger domain containing 1
[Homo sapiens]
Length = 726
Score = 34.3 bits (77), Expect = 0.068
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 16/92 (17%)
Query: 3 KQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSPE- 61
+++RK P TE++ +K+ + E LG +G+GS+GE G E EL
Sbjct: 370 REERKKP--TEEEIRKICRDEKEA--LGQNEESPKQGSGSEGE----DGFQVELELVELT 421
Query: 62 -------EQRVLERKLKKERKKEERQRLREAG 86
E VL ++ +++R K+E+ R +EAG
Sbjct: 422 VGTLDLCESEVLPKRRRRKRNKKEKSRDQEAG 453
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 34.3 bits (77), Expect = 0.068
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 22/179 (12%)
Query: 3 KQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPE----L 58
++K+++ + + ++K +KA E L E A A E R + E L
Sbjct: 594 EKKKQIEQKFAQIDEKTEKAKEER--LAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWL 651
Query: 59 SPEEQRVLERKLKKERKKEERQRLREAG----LVAQHPPARRSGAELALDYLCRWAQKHK 114
EE+ ++L +++K+EE++RLR+A L Q RR + R ++ +
Sbjct: 652 QQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQER--REQERRE 709
Query: 115 NWRFQKTRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALMRELDEE 173
R ++ RQ + +++ E LQ R + L +QK E L REL+E+
Sbjct: 710 QERREQERQLAEQERRREQERLQAE---------RELQEREKALRLQK-EQLQRELEEK 758
Score = 32.7 bits (73), Expect = 0.20
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 20/110 (18%)
Query: 3 KQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSPEE 62
+Q+R+ E E++ ++ ++ E L E E L AE EL E
Sbjct: 694 EQERREQERREQERREQERREQERQLAEQERRREQER------------LQAERELQERE 741
Query: 63 QRV------LERKLKKERKKEERQRLREAGLVAQHPPARR--SGAELALD 104
+ + L+R+L++++KKEE+QRL E L + + +GA AL+
Sbjct: 742 KALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAKEAAGASKALN 791
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 34.3 bits (77), Expect = 0.068
Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 22/179 (12%)
Query: 3 KQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPE----L 58
++K+++ + + ++K +KA E L E A A E R + E L
Sbjct: 590 EKKKQIEQKFAQIDEKTEKAKEER--LAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWL 647
Query: 59 SPEEQRVLERKLKKERKKEERQRLREAG----LVAQHPPARRSGAELALDYLCRWAQKHK 114
EE+ ++L +++K+EE++RLR+A L Q RR + R ++ +
Sbjct: 648 QQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQER--REQERRE 705
Query: 115 NWRFQKTRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALMRELDEE 173
R ++ RQ + +++ E LQ R + L +QK E L REL+E+
Sbjct: 706 QERREQERQLAEQERRREQERLQAE---------RELQEREKALRLQK-EQLQRELEEK 754
Score = 32.7 bits (73), Expect = 0.20
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 20/110 (18%)
Query: 3 KQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSPEE 62
+Q+R+ E E++ ++ ++ E L E E L AE EL E
Sbjct: 690 EQERREQERREQERREQERREQERQLAEQERRREQER------------LQAERELQERE 737
Query: 63 QRV------LERKLKKERKKEERQRLREAGLVAQHPPARR--SGAELALD 104
+ + L+R+L++++KKEE+QRL E L + + +GA AL+
Sbjct: 738 KALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAKEAAGASKALN 787
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 33.9 bits (76), Expect = 0.089
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 19/113 (16%)
Query: 13 EKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSPEEQRVL------ 66
+KK+KK KK E + PS + EA+ + + E + EE+R+
Sbjct: 314 KKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEELE 373
Query: 67 ------------ERKLKKERKKEERQRLREAG-LVAQHPPARRSGAELALDYL 106
+R+ KK+++KE ++RL++ G L+ + R+ AE L L
Sbjct: 374 AKRKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKSQREARARAEATLKLL 426
>gi|16579828 zinc finger protein 91 [Homo sapiens]
Length = 570
Score = 33.9 bits (76), Expect = 0.089
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Query: 4 QKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSPEEQ 63
++ + PE +++ + KA+ E P P A + AG+ VLR G D +
Sbjct: 6 EEPRPPEQQDQEGGEAAKAAPEEPQQRPPEAVAAAPAGTTSSRVLRGGRDRGRAAAAAAA 65
Query: 64 RVLERKLKKE--RKKEERQRLREAGLVAQHPPARRS 97
+ R+ K E R++ R + Q P A +S
Sbjct: 66 AAVSRRRKAEYPRRRRSSPSARPPDVPGQQPQAAKS 101
>gi|21361517 UBX domain protein 1 [Homo sapiens]
Length = 312
Score = 33.5 bits (75), Expect = 0.12
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Query: 26 GPLLGPEAAPSG----EGAGS-KGEAVLRPGLDAEPELSPEEQRVLERKLKKERKKEERQ 80
G +LG E S EG+GS GE +P L +E E + +R+LE +K+R++EER+
Sbjct: 57 GHILGREPTSSEQGGLEGSGSAAGEG--KPAL-SEEERQEQTKRMLELVAQKQREREERE 113
Query: 81 RLREAGLVAQHPPARRSGAELA 102
REA + + RR G EL+
Sbjct: 114 E-REA--LERERQRRRQGQELS 132
Score = 28.1 bits (61), Expect = 4.9
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 22 ASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSPEEQRVLERKLKKERKKEERQR 81
+S +G L G +A +GEG + E + EL ++QR E + ++E + ERQR
Sbjct: 66 SSEQGGLEGSGSA-AGEGKPALSEEERQEQTKRMLELVAQKQREREEREEREALERERQR 124
Query: 82 LRE 84
R+
Sbjct: 125 RRQ 127
>gi|51173873 high-mobility group protein 2-like 1 [Homo sapiens]
Length = 601
Score = 33.1 bits (74), Expect = 0.15
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 3 KQKRKVPEVTEKKNK---KLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELS 59
K+K+K + +KK+K K K+ S LG A P GE + G P A
Sbjct: 317 KKKKKSKKSKKKKDKEKHKEKRHSKSKRSLGLSAVPVGEVTVTSGPPPSIPYAGAAAPPL 376
Query: 60 PEEQRVLERKLKKERKKEERQRLREAG 86
P + +K++KKEE+ + RE G
Sbjct: 377 PLPGLHTDGHSEKKKKKEEKDKERERG 403
>gi|189409142 telomeric repeat binding factor 1 isoform 1 [Homo
sapiens]
Length = 439
Score = 33.1 bits (74), Expect = 0.15
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 33 AAPSGEGAGSKGEAVLRPGLDAEPELSPEEQ----RVLERKLKKERKKEERQRLREAGLV 88
AAPS G +A AE E + EEQ +LE +++ +EE + +AGLV
Sbjct: 8 AAPSPRGCADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEEEEDAGLV 67
Query: 89 AQHPPARRSGAELALDY----LCRWAQKHKNWRFQKTRQT 124
A+ A A LD+ LCR + ++ F++TR +
Sbjct: 68 AE---AEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNS 104
>gi|189409140 telomeric repeat binding factor 1 isoform 2 [Homo
sapiens]
Length = 419
Score = 33.1 bits (74), Expect = 0.15
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 33 AAPSGEGAGSKGEAVLRPGLDAEPELSPEEQ----RVLERKLKKERKKEERQRLREAGLV 88
AAPS G +A AE E + EEQ +LE +++ +EE + +AGLV
Sbjct: 8 AAPSPRGCADGRDADPTEEQMAETERNDEEQFECQELLECQVQVGAPEEEEEEEEDAGLV 67
Query: 89 AQHPPARRSGAELALDY----LCRWAQKHKNWRFQKTRQT 124
A+ A A LD+ LCR + ++ F++TR +
Sbjct: 68 AE---AEAVAAGWMLDFLCLSLCRAFRDGRSEDFRRTRNS 104
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 32.7 bits (73), Expect = 0.20
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 2 AKQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSPE 61
A ++ +P T K+ A A PL G + P+ G A+ RPG + E E
Sbjct: 2305 AAREEPLPTTTPAAIKEAAGAPAPAPLAG-QKPPADAAPGGGSGALSRPGFEKEEASQEE 2363
Query: 62 EQRV-------LER------KLKKERKKEERQRLR 83
QR LER KL++ R +EE +R R
Sbjct: 2364 RQRKQQEQLLQLERERVELEKLRQLRLQEELERER 2398
>gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens]
Length = 271
Score = 32.7 bits (73), Expect = 0.20
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 10/69 (14%)
Query: 19 LKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSPEEQRVLERKLKKERKKEE 78
L KA+ E P E G G+G+ PG A P+ E+Q+ L RK+ E
Sbjct: 65 LPKAAREKPEAPAEPPGPGPGSGA------HPGGSARPDAKEEQQQQLRRKI----NSRE 114
Query: 79 RQRLREAGL 87
R+R+++ L
Sbjct: 115 RKRMQDLNL 123
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 32.7 bits (73), Expect = 0.20
Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 20/88 (22%)
Query: 3 KQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSP-E 61
K RK + +K+ K K AS+E EA P ++ +RP E+ P
Sbjct: 236 KNSRKHKKEKKKRKKSKKSASSESEAENLEAQP---------QSTVRP-----EEIPPIP 281
Query: 62 EQRVLERKL-----KKERKKEERQRLRE 84
E R L RK +KERK ER+R RE
Sbjct: 282 ENRFLMRKSPPKADEKERKNRERERERE 309
Score = 27.7 bits (60), Expect = 6.4
Identities = 15/69 (21%), Positives = 32/69 (46%)
Query: 13 EKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSPEEQRVLERKLKK 72
+K+ KK K+S+ ++ S + S + + + + ++ R RK KK
Sbjct: 184 KKEEKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKKKHRKNSRKHKK 243
Query: 73 ERKKEERQR 81
E+KK ++ +
Sbjct: 244 EKKKRKKSK 252
>gi|17158023 hypothetical protein LOC85395 [Homo sapiens]
Length = 230
Score = 32.7 bits (73), Expect = 0.20
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 20 KKASAEGPLL-GPEAAPSGEGAGSKGEAVLRPGLDAEPELSPEEQRVLERKLKKERKKEE 78
K +A GP PEA P A K A + + A ++ P L +KL+ + +
Sbjct: 19 KGEAAPGPAPPAPEATPPPASAAGKDWAFINTNIFARTKIDPS---ALVQKLELDVRSVT 75
Query: 79 RQRLREAGLVAQHPPARRSGAE 100
R EAG A+ P+ R GAE
Sbjct: 76 SVRRGEAGSSARSVPSIRRGAE 97
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 32.3 bits (72), Expect = 0.26
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 10 EVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGS-KGEAVLRPGLDAEPELSPEEQRVLER 68
+V KK+K +K + P + + PS E K E + D +P+ + E+ E
Sbjct: 585 KVMVKKDKPIKTETK--PSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKET 642
Query: 69 KLKKERKKEERQR 81
K+K E KKEE+++
Sbjct: 643 KVKPEDKKEEKEK 655
Score = 27.3 bits (59), Expect = 8.4
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 10 EVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGS-----KGEAVLRPGLDAEPELSPEE-Q 63
E EK K++ K + P+ E E K E P + + E P+E +
Sbjct: 651 EEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVK 710
Query: 64 RVLERKLKKERKKEERQRLRE 84
+ ++++ KKE KKEE++ +E
Sbjct: 711 KEVKKEEKKEVKKEEKEPKKE 731
>gi|6912326 family with sequence similarity 50, member B [Homo
sapiens]
Length = 325
Score = 32.3 bits (72), Expect = 0.26
Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 32/190 (16%)
Query: 5 KRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGA------GSKGEAVLRPGLDAEPEL 58
K+++ E T K++ K+ SA + E S G ++ EA++R + E +L
Sbjct: 32 KQRIAEETILKSQVDKRFSAHYDAVEAELKSSTVGLVTLNDMKARQEALVR---ERERQL 88
Query: 59 SP----EEQRVLERKLKKERKKEERQR--------LREAGLVAQHPPARRSG-----AEL 101
+ EEQR+ + + +++ ++ ER+R L + A ARR+G ++
Sbjct: 89 AKRQHLEEQRLQQERQREQEQRRERKRKISCLSFALDDLDDQADAAEARRAGNLGKNPDV 148
Query: 102 ALDYL-CRWAQKHKNWRFQKTRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTV 160
+L R ++ +N ++ RQ W +KV DE +Y +G G R + V
Sbjct: 149 DTSFLPDRDREEEENRLREELRQEW----EAQREKVKDEEMEVTFSYWDG-SGHRRTVRV 203
Query: 161 QKAEALMREL 170
+K + + L
Sbjct: 204 RKGNTVQQFL 213
>gi|111607441 hypothetical protein LOC400506 [Homo sapiens]
Length = 458
Score = 32.0 bits (71), Expect = 0.34
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 19/103 (18%)
Query: 3 KQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSG-------EGAGSKGEAVLRPG---L 52
K+KRK P K KK KK EG L + PS +G+ K V P +
Sbjct: 199 KRKRKSPREHNGKVKKKKKIHQEGDALPGHSKPSRSMESSPRKGSKKKPVKVEAPEYIPI 258
Query: 53 DAEPELSPE---------EQRVLERKLKKERKKEERQRLREAG 86
+P+ S + EQ V+E K +KK++R+ AG
Sbjct: 259 SDDPKASAKKKMKSKKKVEQPVIEEPALKRKKKKKRKESGVAG 301
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 32.0 bits (71), Expect = 0.34
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 55 EPELSPEEQRVLERKLKKERKKEERQRLREAGLVAQHPPARRSGAELALDYLCRWAQKHK 114
E EL EE+++L + +K R++ ERQ E L Q R + D +W + +
Sbjct: 1173 EEELQQEEEQLLREEQEKRRQERERQYREEEELQRQKRKQRYRDEDQRSDLKWQWEPEKE 1232
Query: 115 N 115
N
Sbjct: 1233 N 1233
Score = 28.5 bits (62), Expect = 3.7
Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 28/187 (14%)
Query: 3 KQKRKVPEVTEKKNKKLKKASAEGPLLGPEAAPSGEGAGSKGEAVLRPGLDAEPELSPEE 62
K++R+ E +K+KKL++ E LLG E K E EL EE
Sbjct: 950 KRRRQERERQYRKDKKLQQK--EEQLLGEEPEKRRRQEREKKYR-------EEEELQQEE 1000
Query: 63 QRVL-ERKLKKERKKEERQRLREAGLVAQHPPARRSGAELALDYLCRWAQKHKNWRFQKT 121
+++L E + K+ R++ ERQ ++ L + R E R ++ + +R ++
Sbjct: 1001 EQLLREEREKRRRQEWERQYRKKDELQQEEEQLLREEREKR-----RLQERERQYREEEE 1055
Query: 122 RQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALMRELDEEGSDPPLPG 181
Q + +++ E T Q R E Q+ E L+RE +P
Sbjct: 1056 LQ-------QEEEQLLGEERETRRRQELERQYRKEEELQQEEEQLLRE------EPEKRR 1102
Query: 182 RAQRIRQ 188
R +R RQ
Sbjct: 1103 RQERERQ 1109
Score = 28.1 bits (61), Expect = 4.9
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 55 EPELSPEEQRVLERKLKKERKKEERQRLREAGLVAQHP-------PARRSGAELALDY 105
E EL EE+++L + +K R++E ++ RE V Q P +R EL Y
Sbjct: 1113 EEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELERQY 1170
>gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 6 [Homo sapiens]
Length = 1093
Score = 32.0 bits (71), Expect = 0.34
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 54 AEPELSPEEQRVLERKLKKERKKEERQRLREAG 86
A P+L+PE Q V+ + +++ ++K E QRL+ AG
Sbjct: 955 ASPQLTPEHQTVVYQMIQQIQQKRELQRLQMAG 987
>gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens]
Length = 1312
Score = 32.0 bits (71), Expect = 0.34
Identities = 26/104 (25%), Positives = 53/104 (50%), Gaps = 20/104 (19%)
Query: 61 EEQRVLERKLKKERKKEERQRLREAGLVAQHPPARRSGAELALDYLCRWAQKHKNWRFQK 120
EEQ+ ER+ +K ++KE+++RL + + + R++ E Q++K + ++
Sbjct: 409 EEQQRREREQRKLQEKEQQRRLEDMQALRREEERRQAERE----------QEYKRKQLEE 458
Query: 121 TRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAE 164
RQ+ L ++ EH AYL+ LQ + ++ +QK +
Sbjct: 459 QRQSERL-----QRQLQQEH-----AYLKSLQQQQQQQQLQKQQ 492
>gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens]
Length = 1303
Score = 32.0 bits (71), Expect = 0.34
Identities = 26/104 (25%), Positives = 53/104 (50%), Gaps = 20/104 (19%)
Query: 61 EEQRVLERKLKKERKKEERQRLREAGLVAQHPPARRSGAELALDYLCRWAQKHKNWRFQK 120
EEQ+ ER+ +K ++KE+++RL + + + R++ E Q++K + ++
Sbjct: 409 EEQQRREREQRKLQEKEQQRRLEDMQALRREEERRQAERE----------QEYKRKQLEE 458
Query: 121 TRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAE 164
RQ+ L ++ EH AYL+ LQ + ++ +QK +
Sbjct: 459 QRQSERL-----QRQLQQEH-----AYLKSLQQQQQQQQLQKQQ 492
>gi|27436917 misshapen/NIK-related kinase isoform 3 [Homo sapiens]
Length = 1332
Score = 32.0 bits (71), Expect = 0.34
Identities = 26/104 (25%), Positives = 53/104 (50%), Gaps = 20/104 (19%)
Query: 61 EEQRVLERKLKKERKKEERQRLREAGLVAQHPPARRSGAELALDYLCRWAQKHKNWRFQK 120
EEQ+ ER+ +K ++KE+++RL + + + R++ E Q++K + ++
Sbjct: 409 EEQQRREREQRKLQEKEQQRRLEDMQALRREEERRQAERE----------QEYKRKQLEE 458
Query: 121 TRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAE 164
RQ+ L ++ EH AYL+ LQ + ++ +QK +
Sbjct: 459 QRQSERL-----QRQLQQEH-----AYLKSLQQQQQQQQLQKQQ 492
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.131 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,471,846
Number of Sequences: 37866
Number of extensions: 413179
Number of successful extensions: 3689
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 182
Number of HSP's that attempted gapping in prelim test: 3129
Number of HSP's gapped (non-prelim): 701
length of query: 194
length of database: 18,247,518
effective HSP length: 97
effective length of query: 97
effective length of database: 14,574,516
effective search space: 1413728052
effective search space used: 1413728052
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.