TERF1 10419

Name: TERF1	Sequence: fasta or formatted (419aa)		NCBI GI: 189409140
Description: telomeric repeat binding factor 1 isoform 2		Referenced in: Telomere Functions
Other entries for this name: alt prot [439aa] telomeric repeat binding factor 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 31 3 C cysteine 1.9 8 1 D aspartate 5.3 22 1 E glutamate 11.5 48 8 F phenylalanine 4.1 17 2 G glycine 4.1 17 1 H histidine 2.6 11 1 I isoleucine 4.8 20 2 K lysine 8.4 35 4 L leucine 7.6 32 2 M methionine 3.1 13 2 N asparagine 4.1 17 2 P proline 2.9 12 1 Q glutamine 4.8 20 3 R arginine 7.2 30 2 S serine 8.4 35 2 T threonine 5.3 22 1 V valine 4.1 17 2 W tryptophan 1.4 6 1 Y tyrosine 1.4 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 telomeric repeat binding factor 1 isoform 2 TERF1 0.985 telomeric repeat binding factor 1 isoform 1 LOC646359 0.876 PREDICTED: similar to telomeric repeat binding fact... LOC646359 0.875 PREDICTED: similar to telomeric repeat binding facto... LOC100289185 0.253 PREDICTED: hypothetical protein XP_002343917 TERF2 0.086 telomeric repeat binding factor 2 ZEB1 0.021 zinc finger E-box binding homeobox 1 isoform a [Hom... ZEB1 0.021 zinc finger E-box binding homeobox 1 isoform b [Hom... MYBL2 0.020 MYB-related protein B DDX21 0.017 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 TTBK1 0.017 tau tubulin kinase 1 MYT1 0.016 myelin transcription factor 1 LOC100131202 0.015 PREDICTED: hypothetical protein SON 0.015 SON DNA-binding protein isoform F SON 0.015 SON DNA-binding protein isoform B MYB 0.013 v-myb myeloblastosis viral oncogene homolog isoform... MYB 0.013 v-myb myeloblastosis viral oncogene homolog isoform... MYB 0.013 v-myb myeloblastosis viral oncogene homolog isoform... MYB 0.013 v-myb myeloblastosis viral oncogene homolog isoform... MYB 0.013 v-myb myeloblastosis viral oncogene homolog isoform... MYB 0.013 v-myb myeloblastosis viral oncogene homolog isoform ... MYB 0.013 v-myb myeloblastosis viral oncogene homolog isoform... MYB 0.013 v-myb myeloblastosis viral oncogene homolog isoform... C3orf44 0.013 hypothetical protein LOC131831 CHD3 0.013 chromodomain helicase DNA binding protein 3 isoform... LRRIQ1 0.013 leucine-rich repeats and IQ motif containing 1 isof... LRRIQ1 0.013 leucine-rich repeats and IQ motif containing 1 isof... HRC 0.013 histidine rich calcium binding protein precursor [Hom... PELP1 0.012 proline, glutamic acid and leucine rich protein 1 [... NIPBL 0.012 delangin isoform B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.