TERF1 10420

Name: TERF1	Sequence: fasta or formatted (439aa)		NCBI GI: 189409142
Description: telomeric repeat binding factor 1 isoform 1		Referenced in: Telomere Functions
Other entries for this name: alt prot [419aa] telomeric repeat binding factor 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 32 3 C cysteine 1.8 8 1 D aspartate 5.2 23 1 E glutamate 11.4 50 8 F phenylalanine 3.9 17 2 G glycine 4.1 18 1 H histidine 2.5 11 1 I isoleucine 4.6 20 2 K lysine 8.2 36 4 L leucine 7.7 34 2 M methionine 3.0 13 2 N asparagine 3.9 17 2 P proline 2.7 12 1 Q glutamine 4.8 21 3 R arginine 6.8 30 2 S serine 9.3 41 2 T threonine 5.5 24 1 V valine 4.6 20 2 W tryptophan 1.4 6 1 Y tyrosine 1.4 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 telomeric repeat binding factor 1 isoform 1 TERF1 0.945 telomeric repeat binding factor 1 isoform 2 LOC646359 0.827 PREDICTED: similar to telomeric repeat binding fact... LOC646359 0.825 PREDICTED: similar to telomeric repeat binding facto... LOC100289185 0.242 PREDICTED: hypothetical protein XP_002343917 TERF2 0.125 telomeric repeat binding factor 2 ZEB1 0.020 zinc finger E-box binding homeobox 1 isoform a [Hom... ZEB1 0.020 zinc finger E-box binding homeobox 1 isoform b [Hom... MYBL2 0.019 MYB-related protein B TTBK1 0.016 tau tubulin kinase 1 MYT1 0.015 myelin transcription factor 1 NIPBL 0.015 delangin isoform B NIPBL 0.015 delangin isoform A EXOSC10 0.015 exosome component 10 isoform 2 PPIG 0.014 peptidylprolyl isomerase G SR140 0.014 U2-associated SR140 protein UPF2 0.014 UPF2 regulator of nonsense transcripts homolog [Homo... UPF2 0.014 UPF2 regulator of nonsense transcripts homolog [Homo... MYB 0.013 v-myb myeloblastosis viral oncogene homolog isoform... MYB 0.013 v-myb myeloblastosis viral oncogene homolog isoform... MYB 0.013 v-myb myeloblastosis viral oncogene homolog isoform... MYB 0.013 v-myb myeloblastosis viral oncogene homolog isoform... MYB 0.013 v-myb myeloblastosis viral oncogene homolog isoform... MYB 0.013 v-myb myeloblastosis viral oncogene homolog isoform ... MYB 0.013 v-myb myeloblastosis viral oncogene homolog isoform... MYB 0.013 v-myb myeloblastosis viral oncogene homolog isoform... C3orf44 0.013 hypothetical protein LOC131831 PRPF38B 0.013 PRP38 pre-mRNA processing factor 38 (yeast) domain ... CHD3 0.013 chromodomain helicase DNA binding protein 3 isoform... HRC 0.013 histidine rich calcium binding protein precursor [Hom... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.