Guide to the Human Genome
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Name: ANKZF1 Sequence: fasta or formatted (726aa) NCBI GI: 109150425
Description:

ankyrin repeat and zinc finger domain containing 1

Referenced in:

Ankyrin Family

Other entries for this name:
alt mRNA [726aa] ankyrin repeat and zinc finger domain containing 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         78           5
 C cysteine            1.7         12           1
 D aspartate           5.1         37           1
 E glutamate           8.7         63           3
 F phenylalanine       3.3         24           2
 G glycine             6.6         48           2
 H histidine           2.5         18           1
 I isoleucine          1.4         10           1
 K lysine              4.5         33           2
 L leucine            10.9         79           3
 M methionine          0.7          5           1
 N asparagine          1.8         13           1
 P proline             6.9         50           2
 Q glutamine           6.6         48           3
 R arginine           10.2         74           4
 S serine              7.4         54           2
 T threonine           4.7         34           2
 V valine              3.9         28           2
 W tryptophan          0.8          6           1
 Y tyrosine            1.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and zinc finger domain containing 1 ... 
ANKZF1                1.000   ankyrin repeat and zinc finger domain containing 1 ...
PPP1R12C              0.020   protein phosphatase 1, regulatory subunit 12C 
RNASEL                0.017   ribonuclease L 
INCENP                0.016   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.016   inner centromere protein antigens 135/155kDa isofor...
FAM50B                0.016   family with sequence similarity 50, member B 
MYO10                 0.015   myosin X 
CEP164                0.014   centrosomal protein 164kDa 
LOC100289089          0.014   PREDICTED: hypothetical protein XP_002343359 
MAP4K4                0.014   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.014   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.014   mitogen-activated protein kinase kinase kinase kinas...
ACBD3                 0.014   acyl-Coenzyme A binding domain containing 3 
ZNF622                0.014   zinc finger protein 622 
ANKRD34A              0.014   ankyrin repeat domain 34 
HDAC5                 0.013   histone deacetylase 5 isoform 3 
HDAC5                 0.013   histone deacetylase 5 isoform 1 
MAP7D1                0.013   MAP7 domain containing 1 
TANC1                 0.013   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.013   tetratricopeptide repeat, ankyrin repeat and coiled...
LOC642574             0.013   PREDICTED: IQ motif and ankyrin repeat domain-conta...
ASB7                  0.013   ankyrin repeat and SOCS box-containing protein 7 iso...
TCHH                  0.013   trichohyalin 
ASB7                  0.013   ankyrin repeat and SOCS box-containing protein 7 iso...
ANKRD6                0.013   ankyrin repeat domain 6 
ANKK1                 0.012   ankyrin repeat and kinase domain containing 1 
MN1                   0.012   meningioma  1 
UBXN1                 0.012   UBX domain protein 1 
FOXP2                 0.012   forkhead box P2 isoform I 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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