ATG3 11169

Name: ATG3	Sequence: fasta or formatted (314aa)		NCBI GI: 19526773
Description: Apg3p		Referenced in: Additional Membrane Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 19 2 C cysteine 2.5 8 1 D aspartate 6.7 21 2 E glutamate 12.7 40 4 F phenylalanine 2.2 7 1 G glycine 6.1 19 3 H histidine 3.8 12 2 I isoleucine 5.7 18 2 K lysine 7.0 22 2 L leucine 7.6 24 2 M methionine 2.5 8 1 N asparagine 2.2 7 1 P proline 4.5 14 4 Q glutamine 3.5 11 1 R arginine 2.5 8 1 S serine 1.9 6 1 T threonine 8.9 28 1 V valine 7.0 22 1 W tryptophan 1.3 4 1 Y tyrosine 5.1 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 Apg3p APP 0.027 amyloid beta A4 protein isoform c precursor APP 0.027 amyloid beta A4 protein isoform e precursor ATG10 0.021 APG10 autophagy 10-like ATG10 0.021 APG10 autophagy 10-like RYR1 0.019 skeletal muscle ryanodine receptor isoform 2 RYR1 0.019 skeletal muscle ryanodine receptor isoform 1 APP 0.016 amyloid beta A4 protein isoform b precursor APP 0.016 amyloid beta A4 protein isoform a precursor APP 0.016 amyloid beta A4 protein isoform f precursor SCRIB 0.016 scribble isoform b SCRIB 0.016 scribble isoform a PRDM2 0.014 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.014 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.014 retinoblastoma protein-binding zinc finger protein i... EIF5B 0.014 eukaryotic translation initiation factor 5B L1TD1 0.013 LINE-1 type transposase domain containing 1 PDIA4 0.013 protein disulfide isomerase A4 NRD1 0.013 nardilysin isoform a MDN1 0.013 MDN1, midasin homolog HIVEP3 0.011 human immunodeficiency virus type I enhancer bindin... HIVEP3 0.011 human immunodeficiency virus type I enhancer bindin... SDAD1 0.011 SDA1 domain containing 1 ANO8 0.011 anoctamin 8 NRD1 0.011 nardilysin isoform b C10orf140 0.011 hypothetical protein LOC387640 VPRBP 0.010 HIV-1 Vpr binding protein MYT1 0.010 myelin transcription factor 1 SUPT16H 0.010 chromatin-specific transcription elongation factor la... SETD1B 0.010 SET domain containing 1B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.