BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo sapiens] (386 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo ... 816 0.0 gi|195222732 lymphoid enhancer-binding factor 1 isoform 2 [Homo ... 764 0.0 gi|7705917 lymphoid enhancer-binding factor 1 isoform 1 [Homo sa... 749 0.0 gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens] 416 e-116 gi|226371623 transcription factor 7-like 2 isoform 4 [Homo sapiens] 407 e-114 gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens] 396 e-110 gi|226371625 transcription factor 7-like 2 isoform 5 [Homo sapiens] 396 e-110 gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens] 379 e-105 gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens] 360 e-100 gi|226371620 transcription factor 7-like 2 isoform 3 [Homo sapiens] 353 2e-97 gi|42518080 transcription factor 7 (T-cell specific, HMG-box) is... 325 6e-89 gi|42518078 transcription factor 7 (T-cell specific, HMG-box) is... 269 4e-72 gi|47419938 transcription factor 7 (T-cell specific, HMG-box) is... 269 4e-72 gi|198442851 transcription factor 7 (T-cell specific, HMG-box) 6... 244 9e-65 gi|198442849 transcription factor 7 (T-cell specific, HMG-box) 5... 244 9e-65 gi|42518074 transcription factor 7 (T-cell specific, HMG-box) is... 244 9e-65 gi|42714657 transcription factor 7 (T-cell specific, HMG-box) is... 244 9e-65 gi|112421108 capicua homolog [Homo sapiens] 76 4e-14 gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Hom... 64 3e-10 gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Hom... 64 3e-10 gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo... 64 3e-10 gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo... 64 3e-10 gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo... 63 4e-10 gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo... 63 4e-10 gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo... 63 4e-10 gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo... 61 1e-09 gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Hom... 61 1e-09 gi|41406089 SRY-box 13 [Homo sapiens] 59 1e-08 gi|13899269 SRY-box 7 [Homo sapiens] 55 8e-08 gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens] 55 1e-07 >gi|195222734 lymphoid enhancer-binding factor 1 isoform 3 [Homo sapiens] Length = 386 Score = 816 bits (2107), Expect = 0.0 Identities = 386/386 (100%), Positives = 386/386 (100%) Query: 1 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE Sbjct: 1 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60 Query: 61 SEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGGLYNKGPSYSSYSGYIMMPNM 120 SEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGGLYNKGPSYSSYSGYIMMPNM Sbjct: 61 SEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGGLYNKGPSYSSYSGYIMMPNM 120 Query: 121 NNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNS 180 NNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNS Sbjct: 121 NNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNS 180 Query: 181 KQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWFSHHMIPGPPGPHTTGIPHPAIVTPQV 240 KQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWFSHHMIPGPPGPHTTGIPHPAIVTPQV Sbjct: 181 KQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWFSHHMIPGPPGPHTTGIPHPAIVTPQV 240 Query: 241 KQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAA 300 KQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAA Sbjct: 241 KQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAA 300 Query: 301 INQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESAS 360 INQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESAS Sbjct: 301 INQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESAS 360 Query: 361 GGKRSSFPTCKAKAATPGPLLEMEAC 386 GGKRSSFPTCKAKAATPGPLLEMEAC Sbjct: 361 GGKRSSFPTCKAKAATPGPLLEMEAC 386 >gi|195222732 lymphoid enhancer-binding factor 1 isoform 2 [Homo sapiens] Length = 371 Score = 764 bits (1973), Expect = 0.0 Identities = 361/361 (100%), Positives = 361/361 (100%) Query: 1 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE Sbjct: 1 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60 Query: 61 SEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGGLYNKGPSYSSYSGYIMMPNM 120 SEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGGLYNKGPSYSSYSGYIMMPNM Sbjct: 61 SEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGGLYNKGPSYSSYSGYIMMPNM 120 Query: 121 NNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNS 180 NNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNS Sbjct: 121 NNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNS 180 Query: 181 KQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWFSHHMIPGPPGPHTTGIPHPAIVTPQV 240 KQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWFSHHMIPGPPGPHTTGIPHPAIVTPQV Sbjct: 181 KQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWFSHHMIPGPPGPHTTGIPHPAIVTPQV 240 Query: 241 KQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAA 300 KQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAA Sbjct: 241 KQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAA 300 Query: 301 INQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESAS 360 INQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESAS Sbjct: 301 INQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESAS 360 Query: 361 G 361 G Sbjct: 361 G 361 >gi|7705917 lymphoid enhancer-binding factor 1 isoform 1 [Homo sapiens] Length = 399 Score = 749 bits (1934), Expect = 0.0 Identities = 361/389 (92%), Positives = 361/389 (92%), Gaps = 28/389 (7%) Query: 1 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE Sbjct: 1 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60 Query: 61 SEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGGLYNKGPSYSSYSGYIMMPNM 120 SEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGGLYNKGPSYSSYSGYIMMPNM Sbjct: 61 SEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGGLYNKGPSYSSYSGYIMMPNM 120 Query: 121 NNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNS 180 NNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNS Sbjct: 121 NNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNS 180 Query: 181 KQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGW--------------------------- 213 KQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGW Sbjct: 181 KQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWQGQPVYPITGGFRQPYPSSLSVDTSMS 240 Query: 214 -FSHHMIPGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIK 272 FSHHMIPGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIK Sbjct: 241 RFSHHMIPGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIK 300 Query: 273 KPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHM 332 KPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHM Sbjct: 301 KPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHM 360 Query: 333 QLYPGWSARDNYGKKKKRKREKLQESASG 361 QLYPGWSARDNYGKKKKRKREKLQESASG Sbjct: 361 QLYPGWSARDNYGKKKKRKREKLQESASG 389 >gi|226371627 transcription factor 7-like 2 isoform 6 [Homo sapiens] Length = 442 Score = 416 bits (1070), Expect = e-116 Identities = 240/453 (52%), Positives = 281/453 (62%), Gaps = 80/453 (17%) Query: 1 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60 MPQL+GGGG +L A DE+I FKDEG+ Q+EK + E DLAD+KSSLVNE Sbjct: 1 MPQLNGGGGD-----DLGANDELISFKDEGE-QEEK---SSENSSAERDLADVKSSLVNE 51 Query: 61 SEIIP-ASNGHEVARQAQTSQEPYHDKAREHPDDG-KHPDGGLYNKGPSYSSYSGYIMMP 118 SE +S+ E R+ E + DK+RE ++ K DGGL+ KGP Y Y +IM+P Sbjct: 52 SETNQNSSSDSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLF-KGPPYPGYP-FIMIP 109 Query: 119 NMNNDPYMSNGSLSP---------------------------------PIPRTSNKVPVV 145 ++ + PY+ NGSLSP P SNKVPVV Sbjct: 110 DLTS-PYLPNGSLSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVV 168 Query: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205 Q H VHPLTPLITYS+EHF+PG+ P H+P+DV+ K G+ R P PDI +YPLSPG VG Sbjct: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228 Query: 206 QITPPLGW---------------------------------FSHHMIPGPPGPHTTGIPH 232 QI PLGW F HM+P HTTGIPH Sbjct: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288 Query: 233 PAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAE 292 PAIVTP VKQE +D +H + +KE+E K+PHIKKPLNAFMLYMKEMRA VVAE Sbjct: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348 Query: 293 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 352 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR Sbjct: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408 Query: 353 EKLQESASGGKRSSFPTCKAKAATPGPLLEMEA 385 +K +G K+S+F T K KAA L+MEA Sbjct: 409 DKQPGETNGEKKSAFATYKVKAAASAHPLQMEA 441 >gi|226371623 transcription factor 7-like 2 isoform 4 [Homo sapiens] Length = 455 Score = 407 bits (1046), Expect = e-114 Identities = 240/466 (51%), Positives = 281/466 (60%), Gaps = 93/466 (19%) Query: 1 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60 MPQL+GGGG +L A DE+I FKDEG+ Q+EK + E DLAD+KSSLVNE Sbjct: 1 MPQLNGGGGD-----DLGANDELISFKDEGE-QEEK---SSENSSAERDLADVKSSLVNE 51 Query: 61 SEIIP-ASNGHEVARQAQTSQEPYHDKAREHPDDG-KHPDGGLYNKGPSYSSYSGYIMMP 118 SE +S+ E R+ E + DK+RE ++ K DGGL+ KGP Y Y +IM+P Sbjct: 52 SETNQNSSSDSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLF-KGPPYPGYP-FIMIP 109 Query: 119 NMNNDPYMSNGSLSP---------------------------------PIPRTSNKVPVV 145 ++ + PY+ NGSLSP P SNKVPVV Sbjct: 110 DLTS-PYLPNGSLSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVV 168 Query: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205 Q H VHPLTPLITYS+EHF+PG+ P H+P+DV+ K G+ R P PDI +YPLSPG VG Sbjct: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228 Query: 206 QITPPLGW-----------------------------FSHHMIPGPPGPHTTGIPHPAIV 236 QI PLGW F HM+P HTTGIPHPAIV Sbjct: 229 QIPHPLGWQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIV 288 Query: 237 TPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLK 296 TP VKQE +D +H + +KE+E K+PHIKKPLNAFMLYMKEMRA VVAECTLK Sbjct: 289 TPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLK 348 Query: 297 ESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQ 356 ESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR+K Sbjct: 349 ESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQP 408 Query: 357 ESA-----------------SGGKRSSFPTCKAKAATPGPLLEMEA 385 +G K+S+F T K KAA L+MEA Sbjct: 409 GETNEHSECFLNPCLSLPPITGEKKSAFATYKVKAAASAHPLQMEA 454 >gi|170014696 transcription factor 7-like 2 isoform 2 [Homo sapiens] Length = 596 Score = 396 bits (1018), Expect = e-110 Identities = 227/422 (53%), Positives = 264/422 (62%), Gaps = 80/422 (18%) Query: 1 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60 MPQL+GGGG +L A DE+I FKDEG+ Q+EK + E DLAD+KSSLVNE Sbjct: 1 MPQLNGGGGD-----DLGANDELISFKDEGE-QEEK---SSENSSAERDLADVKSSLVNE 51 Query: 61 SEIIP-ASNGHEVARQAQTSQEPYHDKAREHPDDG-KHPDGGLYNKGPSYSSYSGYIMMP 118 SE +S+ E R+ E + DK+RE ++ K DGGL+ KGP Y Y +IM+P Sbjct: 52 SETNQNSSSDSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLF-KGPPYPGYP-FIMIP 109 Query: 119 NMNNDPYMSNGSLSP---------------------------------PIPRTSNKVPVV 145 ++ + PY+ NGSLSP P SNKVPVV Sbjct: 110 DLTS-PYLPNGSLSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVV 168 Query: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205 Q H VHPLTPLITYS+EHF+PG+ P H+P+DV+ K G+ R P PDI +YPLSPG VG Sbjct: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228 Query: 206 QITPPLGW---------------------------------FSHHMIPGPPGPHTTGIPH 232 QI PLGW F HM+P HTTGIPH Sbjct: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288 Query: 233 PAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAE 292 PAIVTP VKQE +D +H + +KE+E K+PHIKKPLNAFMLYMKEMRA VVAE Sbjct: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348 Query: 293 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 352 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR Sbjct: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408 Query: 353 EK 354 +K Sbjct: 409 DK 410 >gi|226371625 transcription factor 7-like 2 isoform 5 [Homo sapiens] Length = 579 Score = 396 bits (1018), Expect = e-110 Identities = 227/422 (53%), Positives = 264/422 (62%), Gaps = 80/422 (18%) Query: 1 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60 MPQL+GGGG +L A DE+I FKDEG+ Q+EK + E DLAD+KSSLVNE Sbjct: 1 MPQLNGGGGD-----DLGANDELISFKDEGE-QEEK---SSENSSAERDLADVKSSLVNE 51 Query: 61 SEIIP-ASNGHEVARQAQTSQEPYHDKAREHPDDG-KHPDGGLYNKGPSYSSYSGYIMMP 118 SE +S+ E R+ E + DK+RE ++ K DGGL+ KGP Y Y +IM+P Sbjct: 52 SETNQNSSSDSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLF-KGPPYPGYP-FIMIP 109 Query: 119 NMNNDPYMSNGSLSP---------------------------------PIPRTSNKVPVV 145 ++ + PY+ NGSLSP P SNKVPVV Sbjct: 110 DLTS-PYLPNGSLSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSNKVPVV 168 Query: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205 Q H VHPLTPLITYS+EHF+PG+ P H+P+DV+ K G+ R P PDI +YPLSPG VG Sbjct: 169 QHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVG 228 Query: 206 QITPPLGW---------------------------------FSHHMIPGPPGPHTTGIPH 232 QI PLGW F HM+P HTTGIPH Sbjct: 229 QIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPH 288 Query: 233 PAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAE 292 PAIVTP VKQE +D +H + +KE+E K+PHIKKPLNAFMLYMKEMRA VVAE Sbjct: 289 PAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAE 348 Query: 293 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 352 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR Sbjct: 349 CTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR 408 Query: 353 EK 354 +K Sbjct: 409 DK 410 >gi|226371764 transcription factor 7-like 2 isoform 1 [Homo sapiens] Length = 602 Score = 379 bits (973), Expect = e-105 Identities = 227/445 (51%), Positives = 264/445 (59%), Gaps = 103/445 (23%) Query: 1 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60 MPQL+GGGG +L A DE+I FKDEG+ Q+EK + E DLAD+KSSLVNE Sbjct: 1 MPQLNGGGGD-----DLGANDELISFKDEGE-QEEK---SSENSSAERDLADVKSSLVNE 51 Query: 61 SEIIP-ASNGHEVARQAQTSQEPYHDKAREHPDDG-KHPDGGLYNKGPSYSSYSGYIMMP 118 SE +S+ E R+ E + DK+RE ++ K DGGL+ KGP Y Y +IM+P Sbjct: 52 SETNQNSSSDSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLF-KGPPYPGYP-FIMIP 109 Query: 119 NMNNDPYMSN---------------------------------------------GSL-- 131 ++ + PY+ N GSL Sbjct: 110 DLTS-PYLPNGSLSPTARTLHFQSGSTHYSAYKTIEHQIAVQYLQMKWPLLDVQAGSLQS 168 Query: 132 --------SP-PIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQ 182 SP P SNKVPVVQ H VHPLTPLITYS+EHF+PG+ P H+P+DV+ K Sbjct: 169 RQALKDARSPSPAHIVSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLPADVDPKT 228 Query: 183 GMSRHPPAPDIPTFYPLSPGGVGQITPPLGW----------------------------- 213 G+ R P PDI +YPLSPG VGQI PLGW Sbjct: 229 GIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNA 288 Query: 214 ----FSHHMIPGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRP 269 F HM+P HTTGIPHPAIVTP VKQE +D +H + +KE+E K+P Sbjct: 289 SMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQESSQSDVGSLHSSKHQDSKKEEEKKKP 348 Query: 270 HIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQ 329 HIKKPLNAFMLYMKEMRA VVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQ Sbjct: 349 HIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQ 408 Query: 330 LHMQLYPGWSARDNYGKKKKRKREK 354 LHMQLYPGWSARDNYGKKKKRKR+K Sbjct: 409 LHMQLYPGWSARDNYGKKKKRKRDK 433 >gi|13786123 HMG-box transcription factor TCF-3 [Homo sapiens] Length = 588 Score = 360 bits (925), Expect = e-100 Identities = 213/436 (48%), Positives = 262/436 (60%), Gaps = 89/436 (20%) Query: 1 MPQLSGGGGGGGGDP---------------ELCATDEMIPFKDEGDPQKEKIFAEISHPE 45 MPQL GGGGGGGG +L A DE+IPF+DEG ++E S Sbjct: 1 MPQLGGGGGGGGGGSGGGGGSSAGAAGGGDDLGANDELIPFQDEGGEEQEPSSDSAS--- 57 Query: 46 EEGDLADIKSSLVNESEIIPASNGHEVARQAQTSQEPYHDKAREHPDDGKHPDGGLYNKG 105 + DL ++KSSLVNESE +S+ E R+ Q ++ + K R++ + + P + KG Sbjct: 58 AQRDLDEVKSSLVNESENQSSSSDSEAERRPQPVRDTFQ-KPRDYFAEVRRPQDSAFFKG 116 Query: 106 PSYSSYSGYIMMPNMNNDPYMSNGSLSPPIPRT--------------------------- 138 P Y Y ++M+P++++ PY+SNG LSP RT Sbjct: 117 PPYPGYP-FLMIPDLSS-PYLSNGPLSPGGARTYLQMKWPLLDVPSSATVKDTRSPSPAH 174 Query: 139 -SNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFY 197 SNKVPVVQ H +HPLTPLITYS++HFSPGS P+H+ +++ K G+ R P ++ +Y Sbjct: 175 LSNKVPVVQHPHHMHPLTPLITYSNDHFSPGSPPTHLSPEIDPKTGIPRPPHPSELSPYY 234 Query: 198 PLSPGGVGQITPPLGW-------------------------------------FSHHMI- 219 PLSPG VGQI PLGW FS HM+ Sbjct: 235 PLSPGAVGQIPHPLGWLVPQQGQPMYSLPPGGFRHPYPALAMNASMSSLVSSRFSPHMVA 294 Query: 220 PGPPGPHTTGIPHPAIVTPQVKQEH-PHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAF 278 P PG T+GIPHPAIV+P VKQE P + S + VK +KE+E K+PH+KKPLNAF Sbjct: 295 PAHPGLPTSGIPHPAIVSPIVKQEPAPPSLSPAVSVKSPVTVKKEEE-KKPHVKKPLNAF 353 Query: 279 MLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGW 338 MLYMKEMRA VVAECTLKESAAINQILGR+WH LSREEQAKYYELARKERQLH QLYP W Sbjct: 354 MLYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREEQAKYYELARKERQLHSQLYPTW 413 Query: 339 SARDNYGKKKKRKREK 354 SARDNYGKKKKRKREK Sbjct: 414 SARDNYGKKKKRKREK 429 >gi|226371620 transcription factor 7-like 2 isoform 3 [Homo sapiens] Length = 489 Score = 353 bits (905), Expect = 2e-97 Identities = 230/502 (45%), Positives = 273/502 (54%), Gaps = 131/502 (26%) Query: 1 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60 MPQL+GGGG +L A DE+I FKDEG+ Q+EK + E DLAD+KSSLVNE Sbjct: 1 MPQLNGGGGD-----DLGANDELISFKDEGE-QEEK---SSENSSAERDLADVKSSLVNE 51 Query: 61 SEIIP-ASNGHEVARQAQTSQEPYHDKAREHPDD-GKHPDGGLYNKGPSYSSYSGYIMMP 118 SE +S+ E R+ E + DK+RE ++ K DGGL+ KGP Y Y +IM+P Sbjct: 52 SETNQNSSSDSEAERRPPPRSESFRDKSRESLEEAAKRQDGGLF-KGPPYPGYP-FIMIP 109 Query: 119 NMNNDPYMSNGSLSPPIPRT--SNKVPVV-------------------QPSHAVHPLTPL 157 ++ + PY+ NGSLS P RT K P++ P+H V PL P Sbjct: 110 DLTS-PYLPNGSLS-PTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVSPL-PC 166 Query: 158 IT--YSDEHFSPGS------------------------------------HPSHI----- 174 T + +HF P S HP H+ Sbjct: 167 CTQGHDCQHFYPPSDFTVSTQVFRDMKRSHSLQKVGEPWCIESNKVPVVQHPHHVHPLTP 226 Query: 175 ------------------PSDVNSKQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGW--- 213 P+DV+ K G+ R P PDI +YPLSPG VGQI PLGW Sbjct: 227 LITYSNEHFTPGNPPPHLPADVDPKTGIPRPPHPPDISPYYPLSPGTVGQIPHPLGWLVP 286 Query: 214 ------------------------------FSHHMIPGPPGPHTTGIPHPAIVTPQVKQE 243 F HM+P HTTGIPHPAIVTP VKQE Sbjct: 287 QQGQPVYPITTGGFRHPYPTALTVNASMSRFPPHMVPPHHTLHTTGIPHPAIVTPTVKQE 346 Query: 244 HPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQ 303 +D +H + +KE+E K+PHIKKPLNAFMLYMKEMRA VVAECTLKESAAINQ Sbjct: 347 SSQSDVGSLHSSKHQDSKKEEEKKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQ 406 Query: 304 ILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESASGGK 363 ILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKR+K +G K Sbjct: 407 ILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKRDKQPGETNGEK 466 Query: 364 RSSFPTCKAKAATPGPLLEMEA 385 +S+F T K KAA L+MEA Sbjct: 467 KSAFATYKVKAAASAHPLQMEA 488 >gi|42518080 transcription factor 7 (T-cell specific, HMG-box) isoform 1 [Homo sapiens] Length = 384 Score = 325 bits (832), Expect = 6e-89 Identities = 198/403 (49%), Positives = 245/403 (60%), Gaps = 42/403 (10%) Query: 1 MPQLSGGGGGGGGDPELCATDEMIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE 60 MPQL GGGG GG +L A DE++ F+DEG+ Q +K + PE DLA++KSSLVNE Sbjct: 1 MPQLDSGGGGAGGGDDLGAPDELLAFQDEGEEQDDKSRDSAAGPER--DLAELKSSLVNE 58 Query: 61 SEIIPASNG--------------HEVARQAQTSQEPYHDKAREHPDDG-KHPD--GGLYN 103 SE G E + +Q + DK E +DG K P+ G+Y Sbjct: 59 SEGAAGGAGIPGVPGAGAGARGEAEALGREHAAQRLFPDKLPEPLEDGLKAPECTSGMYK 118 Query: 104 KGPSYSSYSGYIMMPNMNNDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDE 163 + + YS + ++ M+ P G P P P+ + + H + L Y E Sbjct: 119 E----TVYSAFNLL--MHYPPPSGAGQHPQPQP------PLHKANQPPHGVPQLSLY--E 164 Query: 164 HFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWFSHHMI---P 220 HF+ HP+ P+D++ KQ + R PD+ FY L+ G +GQ+ + WF+H + Sbjct: 165 HFN-SPHPTPAPADISQKQ-VHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPSLMLGS 222 Query: 221 GPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRKEQEPKRPHIKKPLNAFML 280 G PG H IPHPAIV P KQE D +L K Q E + E+E K+P IKKPLNAFML Sbjct: 223 GVPG-HPAAIPHPAIVPPSGKQELQPFDRNL---KTQAESKAEKEAKKPTIKKPLNAFML 278 Query: 281 YMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSA 340 YMKEMRA V+AECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSA Sbjct: 279 YMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSA 338 Query: 341 RDNYGKKKKRKREKLQESASGGKRSSFPTCKAKAATPGPLLEM 383 RDNYGKKK+R REK QES +GGKR++F T KAA P P L M Sbjct: 339 RDNYGKKKRRSREKHQESTTGGKRNAFGTYPEKAAAPAPFLPM 381 >gi|42518078 transcription factor 7 (T-cell specific, HMG-box) isoform 2 [Homo sapiens] Length = 269 Score = 269 bits (687), Expect = 4e-72 Identities = 146/241 (60%), Positives = 169/241 (70%), Gaps = 14/241 (5%) Query: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205 QP H V L+ EHF+ HP+ P+D++ KQ + R PD+ FY L+ G +G Sbjct: 37 QPPHGVPQLSLY-----EHFN-SPHPTPAPADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89 Query: 206 QITPPLGWFSHHMI---PGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRK 262 Q+ + WF+H + G PG H IPHPAIV P KQE D +L K Q E + Sbjct: 90 QLPHTVSWFTHPSLMLGSGVPG-HPAAIPHPAIVPPSGKQELQPFDRNL---KTQAESKA 145 Query: 263 EQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYE 322 E+E K+P IKKPLNAFMLYMKEMRA V+AECTLKESAAINQILGRRWHALSREEQAKYYE Sbjct: 146 EKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYE 205 Query: 323 LARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESASGGKRSSFPTCKAKAATPGPLLE 382 LARKERQLHMQLYPGWSARDNYGKKK+R REK QES +GGKR++F T KAA P P L Sbjct: 206 LARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTYPEKAAAPAPFLP 265 Query: 383 M 383 M Sbjct: 266 M 266 >gi|47419938 transcription factor 7 (T-cell specific, HMG-box) isoform 2 [Homo sapiens] Length = 269 Score = 269 bits (687), Expect = 4e-72 Identities = 146/241 (60%), Positives = 169/241 (70%), Gaps = 14/241 (5%) Query: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205 QP H V L+ EHF+ HP+ P+D++ KQ + R PD+ FY L+ G +G Sbjct: 37 QPPHGVPQLSLY-----EHFN-SPHPTPAPADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89 Query: 206 QITPPLGWFSHHMI---PGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRK 262 Q+ + WF+H + G PG H IPHPAIV P KQE D +L K Q E + Sbjct: 90 QLPHTVSWFTHPSLMLGSGVPG-HPAAIPHPAIVPPSGKQELQPFDRNL---KTQAESKA 145 Query: 263 EQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYE 322 E+E K+P IKKPLNAFMLYMKEMRA V+AECTLKESAAINQILGRRWHALSREEQAKYYE Sbjct: 146 EKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYE 205 Query: 323 LARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESASGGKRSSFPTCKAKAATPGPLLE 382 LARKERQLHMQLYPGWSARDNYGKKK+R REK QES +GGKR++F T KAA P P L Sbjct: 206 LARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTYPEKAAAPAPFLP 265 Query: 383 M 383 M Sbjct: 266 M 266 >gi|198442851 transcription factor 7 (T-cell specific, HMG-box) 6 [Homo sapiens] Length = 250 Score = 244 bits (623), Expect = 9e-65 Identities = 133/218 (61%), Positives = 154/218 (70%), Gaps = 14/218 (6%) Query: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205 QP H V L+ EHF+ HP+ P+D++ KQ + R PD+ FY L+ G +G Sbjct: 37 QPPHGVPQLSLY-----EHFN-SPHPTPAPADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89 Query: 206 QITPPLGWFSHHMI---PGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRK 262 Q+ + WF+H + G PG H IPHPAIV P KQE D +L K Q E + Sbjct: 90 QLPHTVSWFTHPSLMLGSGVPG-HPAAIPHPAIVPPSGKQELQPFDRNL---KTQAESKA 145 Query: 263 EQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYE 322 E+E K+P IKKPLNAFMLYMKEMRA V+AECTLKESAAINQILGRRWHALSREEQAKYYE Sbjct: 146 EKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYE 205 Query: 323 LARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESAS 360 LARKERQLHMQLYPGWSARDNYGKKK+R REK QES + Sbjct: 206 LARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTT 243 >gi|198442849 transcription factor 7 (T-cell specific, HMG-box) 5 [Homo sapiens] Length = 366 Score = 244 bits (623), Expect = 9e-65 Identities = 133/218 (61%), Positives = 154/218 (70%), Gaps = 14/218 (6%) Query: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205 QP H V L+ EHF+ HP+ P+D++ KQ + R PD+ FY L+ G +G Sbjct: 37 QPPHGVPQLSLY-----EHFN-SPHPTPAPADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89 Query: 206 QITPPLGWFSHHMI---PGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRK 262 Q+ + WF+H + G PG H IPHPAIV P KQE D +L K Q E + Sbjct: 90 QLPHTVSWFTHPSLMLGSGVPG-HPAAIPHPAIVPPSGKQELQPFDRNL---KTQAESKA 145 Query: 263 EQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYE 322 E+E K+P IKKPLNAFMLYMKEMRA V+AECTLKESAAINQILGRRWHALSREEQAKYYE Sbjct: 146 EKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYE 205 Query: 323 LARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESAS 360 LARKERQLHMQLYPGWSARDNYGKKK+R REK QES + Sbjct: 206 LARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTT 243 >gi|42518074 transcription factor 7 (T-cell specific, HMG-box) isoform 3 [Homo sapiens] Length = 269 Score = 244 bits (623), Expect = 9e-65 Identities = 133/218 (61%), Positives = 154/218 (70%), Gaps = 14/218 (6%) Query: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205 QP H V L+ EHF+ HP+ P+D++ KQ + R PD+ FY L+ G +G Sbjct: 37 QPPHGVPQLSLY-----EHFN-SPHPTPAPADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89 Query: 206 QITPPLGWFSHHMI---PGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRK 262 Q+ + WF+H + G PG H IPHPAIV P KQE D +L K Q E + Sbjct: 90 QLPHTVSWFTHPSLMLGSGVPG-HPAAIPHPAIVPPSGKQELQPFDRNL---KTQAESKA 145 Query: 263 EQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYE 322 E+E K+P IKKPLNAFMLYMKEMRA V+AECTLKESAAINQILGRRWHALSREEQAKYYE Sbjct: 146 EKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYE 205 Query: 323 LARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESAS 360 LARKERQLHMQLYPGWSARDNYGKKK+R REK QES + Sbjct: 206 LARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTT 243 >gi|42714657 transcription factor 7 (T-cell specific, HMG-box) isoform 4 [Homo sapiens] Length = 268 Score = 244 bits (623), Expect = 9e-65 Identities = 133/218 (61%), Positives = 154/218 (70%), Gaps = 14/218 (6%) Query: 146 QPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPAPDIPTFYPLSPGGVG 205 QP H V L+ EHF+ HP+ P+D++ KQ + R PD+ FY L+ G +G Sbjct: 37 QPPHGVPQLSLY-----EHFN-SPHPTPAPADISQKQ-VHRPLQTPDLSGFYSLTSGSMG 89 Query: 206 QITPPLGWFSHHMI---PGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQHEQRK 262 Q+ + WF+H + G PG H IPHPAIV P KQE D +L K Q E + Sbjct: 90 QLPHTVSWFTHPSLMLGSGVPG-HPAAIPHPAIVPPSGKQELQPFDRNL---KTQAESKA 145 Query: 263 EQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYE 322 E+E K+P IKKPLNAFMLYMKEMRA V+AECTLKESAAINQILGRRWHALSREEQAKYYE Sbjct: 146 EKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYE 205 Query: 323 LARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESAS 360 LARKERQLHMQLYPGWSARDNYGKKK+R REK QES + Sbjct: 206 LARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTT 243 >gi|112421108 capicua homolog [Homo sapiens] Length = 1608 Score = 76.3 bits (186), Expect = 4e-14 Identities = 68/277 (24%), Positives = 121/277 (43%), Gaps = 30/277 (10%) Query: 134 PIPRTSNKVPVVQPSHAVHPLT-PLITYSDEHFSPGSHPSHIPSDVNSKQGMSRHPPA-- 190 P S P VQPS A P + P+ + + + + +H + PP Sbjct: 42 PFLAPSQPDPSVQPSEAQQPASHPVASNQSKEPAESAAVAHERPPGGTGSADPERPPGAT 101 Query: 191 -PDIPTFYPLSPGGV---GQITPPLGWFSHHMIPGPPGP----HTTGIPHP----AIVTP 238 P+ P P P GV G+ PP + GPPG T H +I++P Sbjct: 102 CPESPGPGPPHPLGVVESGKGPPPT---TEEEASGPPGEPRLDSETESDHDDAFLSIMSP 158 Query: 239 QVKQEHP---HTDSDLMHVKPQHEQRKEQEPKRP------HIKKPLNAFMLYMKEMRANV 289 +++ P L + + + E++ + P HI++P+NAFM++ K RA V Sbjct: 159 EIQLPLPPGKRRTQSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALV 218 Query: 290 VAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKK 349 +++ +++ILG W+AL +E+ KY++LA + ++ H + +P W + KK Sbjct: 219 HQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSS 278 Query: 350 RKREKLQESASGGKRSSFPTCKAK---AATPGPLLEM 383 + + +GG + + ++ AA PG E+ Sbjct: 279 SEAKPTSLGLAGGHKETRERSMSETGTAAAPGVSSEL 315 >gi|224967054 SRY (sex determining region Y)-box 6 isoform 4 [Homo sapiens] Length = 841 Score = 63.5 bits (153), Expect = 3e-10 Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 6/84 (7%) Query: 269 PHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKER 328 PHIK+P+NAFM++ K+ R ++ ++ I++ILG RW ++S +E+ YYE + Sbjct: 632 PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLS 691 Query: 329 QLHMQLYPGWSARDNYGKKKKRKR 352 ++H++ YP NY K + KR Sbjct: 692 KIHLEKYP------NYKYKPRPKR 709 >gi|224967050 SRY (sex determining region Y)-box 6 isoform 3 [Homo sapiens] Length = 801 Score = 63.5 bits (153), Expect = 3e-10 Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 6/84 (7%) Query: 269 PHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKER 328 PHIK+P+NAFM++ K+ R ++ ++ I++ILG RW ++S +E+ YYE + Sbjct: 592 PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLS 651 Query: 329 QLHMQLYPGWSARDNYGKKKKRKR 352 ++H++ YP NY K + KR Sbjct: 652 KIHLEKYP------NYKYKPRPKR 669 >gi|70909338 SRY (sex determining region Y)-box 6 isoform 1 [Homo sapiens] Length = 804 Score = 63.5 bits (153), Expect = 3e-10 Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 6/84 (7%) Query: 269 PHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKER 328 PHIK+P+NAFM++ K+ R ++ ++ I++ILG RW ++S +E+ YYE + Sbjct: 595 PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLS 654 Query: 329 QLHMQLYPGWSARDNYGKKKKRKR 352 ++H++ YP NY K + KR Sbjct: 655 KIHLEKYP------NYKYKPRPKR 672 >gi|71037389 SRY (sex determining region Y)-box 6 isoform 2 [Homo sapiens] Length = 808 Score = 63.5 bits (153), Expect = 3e-10 Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 6/84 (7%) Query: 269 PHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKER 328 PHIK+P+NAFM++ K+ R ++ ++ I++ILG RW ++S +E+ YYE + Sbjct: 599 PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLS 658 Query: 329 QLHMQLYPGWSARDNYGKKKKRKR 352 ++H++ YP NY K + KR Sbjct: 659 KIHLEKYP------NYKYKPRPKR 676 >gi|30061558 SRY (sex determining region Y)-box 5 isoform c [Homo sapiens] Length = 377 Score = 63.2 bits (152), Expect = 4e-10 Identities = 34/139 (24%), Positives = 70/139 (50%), Gaps = 16/139 (11%) Query: 258 HEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQ 317 + + + + PHIK+P+NAFM++ K+ R ++ ++ I++ILG RW A++ E+ Sbjct: 157 YRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEK 216 Query: 318 AKYYELARKERQLHMQLYPGWSARDN-------YGKK---------KKRKREKLQESASG 361 YYE + + H++ YP + + GKK + +R+++++ + Sbjct: 217 QPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNV 276 Query: 362 GKRSSFPTCKAKAATPGPL 380 G+++ P A PG + Sbjct: 277 GQQAQIPIATAGVVYPGAI 295 >gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo sapiens] Length = 750 Score = 63.2 bits (152), Expect = 4e-10 Identities = 34/139 (24%), Positives = 70/139 (50%), Gaps = 16/139 (11%) Query: 258 HEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQ 317 + + + + PHIK+P+NAFM++ K+ R ++ ++ I++ILG RW A++ E+ Sbjct: 530 YRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEK 589 Query: 318 AKYYELARKERQLHMQLYPGWSARDN-------YGKK---------KKRKREKLQESASG 361 YYE + + H++ YP + + GKK + +R+++++ + Sbjct: 590 QPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNV 649 Query: 362 GKRSSFPTCKAKAATPGPL 380 G+++ P A PG + Sbjct: 650 GQQAQIPIATAGVVYPGAI 668 >gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo sapiens] Length = 763 Score = 63.2 bits (152), Expect = 4e-10 Identities = 34/139 (24%), Positives = 70/139 (50%), Gaps = 16/139 (11%) Query: 258 HEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQ 317 + + + + PHIK+P+NAFM++ K+ R ++ ++ I++ILG RW A++ E+ Sbjct: 543 YRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEK 602 Query: 318 AKYYELARKERQLHMQLYPGWSARDN-------YGKK---------KKRKREKLQESASG 361 YYE + + H++ YP + + GKK + +R+++++ + Sbjct: 603 QPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNV 662 Query: 362 GKRSSFPTCKAKAATPGPL 380 G+++ P A PG + Sbjct: 663 GQQAQIPIATAGVVYPGAI 681 >gi|5902112 SRY (sex determining region Y)-box 30 isoform b [Homo sapiens] Length = 501 Score = 61.2 bits (147), Expect = 1e-09 Identities = 27/80 (33%), Positives = 48/80 (60%) Query: 270 HIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQ 329 H+K+P+NAFM++ + R + +A I+ LG W+ LS E++ YY+ A+K ++ Sbjct: 336 HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKE 395 Query: 330 LHMQLYPGWSARDNYGKKKK 349 H + +PGW + GK+K+ Sbjct: 396 KHREEFPGWVYQPRPGKRKR 415 >gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Homo sapiens] Length = 753 Score = 61.2 bits (147), Expect = 1e-09 Identities = 27/80 (33%), Positives = 48/80 (60%) Query: 270 HIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQ 329 H+K+P+NAFM++ + R + +A I+ LG W+ LS E++ YY+ A+K ++ Sbjct: 336 HVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKE 395 Query: 330 LHMQLYPGWSARDNYGKKKK 349 H + +PGW + GK+K+ Sbjct: 396 KHREEFPGWVYQPRPGKRKR 415 >gi|41406089 SRY-box 13 [Homo sapiens] Length = 622 Score = 58.5 bits (140), Expect = 1e-08 Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 10/107 (9%) Query: 270 HIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQ 329 HIK+P+NAFM++ K+ R ++ +++I++ILG RW +++ +E+ YYE + + Sbjct: 423 HIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSR 482 Query: 330 LHMQLYPGWSARDNYGKKKKRKREKLQESASGGKRSSFPTCKAKAAT 376 H++ YP +Y K + KR + E GKR KA T Sbjct: 483 QHLEKYP------DYKYKPRPKRTCIVE----GKRLRVGEYKALMRT 519 >gi|13899269 SRY-box 7 [Homo sapiens] Length = 388 Score = 55.5 bits (132), Expect = 8e-08 Identities = 26/80 (32%), Positives = 47/80 (58%) Query: 271 IKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQL 330 I++P+NAFM++ K+ R + + +A ++++LG+ W AL+ ++ Y + A + R Sbjct: 45 IRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRLQ 104 Query: 331 HMQLYPGWSARDNYGKKKKR 350 HMQ YP + R K+ KR Sbjct: 105 HMQDYPNYKYRPRRKKQAKR 124 >gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens] Length = 315 Score = 55.1 bits (131), Expect = 1e-07 Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 10/119 (8%) Query: 270 HIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQ 329 HIK+P+NAFM++ + R ++ + +A I++ LGRRW L E+ + A + R Sbjct: 39 HIKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRL 98 Query: 330 LHMQLYPGWSARDNYGKKKK----RKREKLQESASGGKR----SSFPTCKAKAATPGPL 380 HM YP + R KK K + R + + GG R P + A GPL Sbjct: 99 KHMADYPDYKYRPR--KKSKGAPAKARPRPPGGSGGGSRLKPGPQLPGRGGRRAAGGPL 155 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.312 0.132 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,846,417 Number of Sequences: 37866 Number of extensions: 1172683 Number of successful extensions: 6336 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 276 Number of HSP's that attempted gapping in prelim test: 5707 Number of HSP's gapped (non-prelim): 859 length of query: 386 length of database: 18,247,518 effective HSP length: 104 effective length of query: 282 effective length of database: 14,309,454 effective search space: 4035266028 effective search space used: 4035266028 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.