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Search of human proteins with 194440673
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194440673 THAP domain containing 5 isoform 2 [Homo sapiens]
(353 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194440673 THAP domain containing 5 isoform 2 [Homo sapiens] 708 0.0
gi|194440668 THAP domain containing 5 isoform 1 [Homo sapiens] 708 0.0
gi|22749337 THAP domain containing 8 [Homo sapiens] 62 8e-10
gi|31982895 THAP domain containing 4 [Homo sapiens] 57 2e-08
gi|8922446 THAP domain containing, apoptosis associated protein ... 48 2e-05
gi|239758038 PREDICTED: mucin 3A, cell surface associated, parti... 47 3e-05
gi|13899259 THAP domain containing, apoptosis associated protein... 45 1e-04
gi|42734379 THAP domain containing, apoptosis associated protein... 42 8e-04
gi|169208042 PREDICTED: similar to Golgin subfamily A member 8-l... 39 0.005
gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-l... 39 0.005
gi|169208038 PREDICTED: similar to Golgin subfamily A member 8-l... 39 0.005
gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-l... 39 0.005
gi|239749213 PREDICTED: mucin 3B, cell surface associated, parti... 38 0.012
gi|46852178 potassium channel modulatory factor 1 [Homo sapiens] 38 0.016
gi|242117946 hypothetical protein LOC57579 isoform c [Homo sapiens] 37 0.020
gi|157671939 hypothetical protein LOC57579 isoform b [Homo sapiens] 37 0.020
gi|157671937 hypothetical protein LOC57579 isoform a [Homo sapiens] 37 0.020
gi|169208018 PREDICTED: similar to Golgin subfamily A member 8-l... 37 0.035
gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-l... 37 0.035
gi|120953300 leucine-rich repeats and IQ motif containing 1 isof... 37 0.035
gi|120953243 leucine-rich repeats and IQ motif containing 1 isof... 37 0.035
gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens] 36 0.046
gi|239752529 PREDICTED: similar to mucin [Homo sapiens] 36 0.046
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 36 0.046
gi|124249396 coiled-coil domain containing 30 [Homo sapiens] 36 0.060
gi|81295809 pericentrin [Homo sapiens] 36 0.060
gi|8923885 myoneurin [Homo sapiens] 36 0.060
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 35 0.078
gi|94536788 THAP domain containing 9 [Homo sapiens] 35 0.10
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 35 0.10
>gi|194440673 THAP domain containing 5 isoform 2 [Homo sapiens]
Length = 353
Score = 708 bits (1828), Expect = 0.0
Identities = 353/353 (100%), Positives = 353/353 (100%)
Query: 1 MKRDSWVPSKYQFLCSDHFTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKDPSKKKSQK 60
MKRDSWVPSKYQFLCSDHFTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKDPSKKKSQK
Sbjct: 1 MKRDSWVPSKYQFLCSDHFTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKDPSKKKSQK 60
Query: 61 KNLEDEKEVCPKAKSEESFVLNETKKNIVNTDVPHQHPELLHSSSLVKPPAPKTGSIQNN 120
KNLEDEKEVCPKAKSEESFVLNETKKNIVNTDVPHQHPELLHSSSLVKPPAPKTGSIQNN
Sbjct: 61 KNLEDEKEVCPKAKSEESFVLNETKKNIVNTDVPHQHPELLHSSSLVKPPAPKTGSIQNN 120
Query: 121 MLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTCFENLNSTTITLTTSNSESIHQSLETQ 180
MLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTCFENLNSTTITLTTSNSESIHQSLETQ
Sbjct: 121 MLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTCFENLNSTTITLTTSNSESIHQSLETQ 180
Query: 181 EVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTVEELNTNKESVIAIFVPAENSK 240
EVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTVEELNTNKESVIAIFVPAENSK
Sbjct: 181 EVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTVEELNTNKESVIAIFVPAENSK 240
Query: 241 PSVNSFISAQKETTEMEDTDIEDSLYKDVDYGTEVLQIEHSYCRQDINKEHLWQKVSKLH 300
PSVNSFISAQKETTEMEDTDIEDSLYKDVDYGTEVLQIEHSYCRQDINKEHLWQKVSKLH
Sbjct: 241 PSVNSFISAQKETTEMEDTDIEDSLYKDVDYGTEVLQIEHSYCRQDINKEHLWQKVSKLH 300
Query: 301 SKITLLELKEQQTLGRLKSLEALIRQLKQENWLSEENVKIIENHFTTYEVTMI 353
SKITLLELKEQQTLGRLKSLEALIRQLKQENWLSEENVKIIENHFTTYEVTMI
Sbjct: 301 SKITLLELKEQQTLGRLKSLEALIRQLKQENWLSEENVKIIENHFTTYEVTMI 353
>gi|194440668 THAP domain containing 5 isoform 1 [Homo sapiens]
Length = 395
Score = 708 bits (1828), Expect = 0.0
Identities = 353/353 (100%), Positives = 353/353 (100%)
Query: 1 MKRDSWVPSKYQFLCSDHFTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKDPSKKKSQK 60
MKRDSWVPSKYQFLCSDHFTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKDPSKKKSQK
Sbjct: 43 MKRDSWVPSKYQFLCSDHFTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKDPSKKKSQK 102
Query: 61 KNLEDEKEVCPKAKSEESFVLNETKKNIVNTDVPHQHPELLHSSSLVKPPAPKTGSIQNN 120
KNLEDEKEVCPKAKSEESFVLNETKKNIVNTDVPHQHPELLHSSSLVKPPAPKTGSIQNN
Sbjct: 103 KNLEDEKEVCPKAKSEESFVLNETKKNIVNTDVPHQHPELLHSSSLVKPPAPKTGSIQNN 162
Query: 121 MLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTCFENLNSTTITLTTSNSESIHQSLETQ 180
MLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTCFENLNSTTITLTTSNSESIHQSLETQ
Sbjct: 163 MLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTCFENLNSTTITLTTSNSESIHQSLETQ 222
Query: 181 EVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTVEELNTNKESVIAIFVPAENSK 240
EVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTVEELNTNKESVIAIFVPAENSK
Sbjct: 223 EVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTVEELNTNKESVIAIFVPAENSK 282
Query: 241 PSVNSFISAQKETTEMEDTDIEDSLYKDVDYGTEVLQIEHSYCRQDINKEHLWQKVSKLH 300
PSVNSFISAQKETTEMEDTDIEDSLYKDVDYGTEVLQIEHSYCRQDINKEHLWQKVSKLH
Sbjct: 283 PSVNSFISAQKETTEMEDTDIEDSLYKDVDYGTEVLQIEHSYCRQDINKEHLWQKVSKLH 342
Query: 301 SKITLLELKEQQTLGRLKSLEALIRQLKQENWLSEENVKIIENHFTTYEVTMI 353
SKITLLELKEQQTLGRLKSLEALIRQLKQENWLSEENVKIIENHFTTYEVTMI
Sbjct: 343 SKITLLELKEQQTLGRLKSLEALIRQLKQENWLSEENVKIIENHFTTYEVTMI 395
>gi|22749337 THAP domain containing 8 [Homo sapiens]
Length = 274
Score = 62.0 bits (149), Expect = 8e-10
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 8/68 (11%)
Query: 4 DSWVPSKYQFLCSDHFTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKDPSKKKSQKKNL 63
+ WVPS +Q LCS+HFTP RWG+RYL+ AVP+IFS + P KSQ++
Sbjct: 47 EHWVPSCHQHLCSEHFTPSCFQWRWGVRYLRPDAVPSIFS-------RGP-PAKSQRRTR 98
Query: 64 EDEKEVCP 71
+K V P
Sbjct: 99 STQKPVSP 106
>gi|31982895 THAP domain containing 4 [Homo sapiens]
Length = 577
Score = 57.0 bits (136), Expect = 2e-08
Identities = 28/52 (53%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 1 MKRDSWVPSKYQFLCSDHFTPDSLDIRW--GIRYLKQTAVPTIFSLPEDNQG 50
++RD+W P+KY FLCS+HFT DS R R LK TAVP+IF L E +G
Sbjct: 42 VQRDNWTPTKYSFLCSEHFTKDSFSKRLEDQHRLLKPTAVPSIFHLTEKKRG 93
>gi|8922446 THAP domain containing, apoptosis associated protein 1
isoform 1 [Homo sapiens]
Length = 213
Score = 47.8 bits (112), Expect = 2e-05
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 1 MKRDSWVPSKYQFLCSDHFTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKD 52
++R ++ P+KY +CS+HFTPD + LK+ AVPTIF E + K+
Sbjct: 40 VRRKNFKPTKYSSICSEHFTPDCFKRECNNKLLKENAVPTIFLCTEPHDKKE 91
>gi|239758038 PREDICTED: mucin 3A, cell surface associated, partial
[Homo sapiens]
Length = 909
Score = 46.6 bits (109), Expect = 3e-05
Identities = 39/191 (20%), Positives = 70/191 (36%), Gaps = 9/191 (4%)
Query: 84 TKKNIVNTDVPHQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKPESTLETSVN 143
T N + H P + S + + P+ T S +++ T T S++ T+
Sbjct: 151 TSSNTITETTSHSTPSYITSITTTETPSSSTPSFSSSITTTETTSHSTPGFTSSITTTET 210
Query: 144 QDTGRGGFHTCFENLNST-------TITLTTSNSESIHQSLETQEVLEVTTSHLANPNFT 196
F + +T T ++TTS + S T + T+ + P+FT
Sbjct: 211 TSHSTPSFTSSITTTETTSHDTPSFTSSITTSETPSHSTPSSTSLITTTKTTSHSTPSFT 270
Query: 197 SNSMEIKSAQENPFLFSTINQTVEELNTNKESVIAIFVPAENSKPSVNSFISA--QKETT 254
S+ ++ + F++ T E + N S + E + S SF S+ ETT
Sbjct: 271 SSITTTETTSHSAHSFTSSITTTETTSHNTRSFTSSITTTETNSHSTTSFTSSITTTETT 330
Query: 255 EMEDTDIEDSL 265
S+
Sbjct: 331 SHSTPSFSSSI 341
Score = 35.0 bits (79), Expect = 0.10
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 13/162 (8%)
Query: 95 HQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTC 154
H P S S + + T S +++T+ H+ +T T+ + H+
Sbjct: 43 HSTPSFTSSISTTETTSHSTPSF-TSLITITETTSHSTPSYTTSITTTETPS-----HST 96
Query: 155 FENLNSTTITLTTSNSE-SIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLFS 213
S T T T S+S S S+ T E TTSH + P+FTS+ ++ + F+
Sbjct: 97 PSYTTSITTTETPSHSTPSFTSSITTTE----TTSH-STPSFTSSIRTTETTSYSTPSFT 151
Query: 214 TINQTVEELNTNKESVIAIFVPAENSKPSVNSFISAQKETTE 255
+ N E + + S I E S SF S+ TTE
Sbjct: 152 SSNTITETTSHSTPSYITSITTTETPSSSTPSF-SSSITTTE 192
Score = 29.3 bits (64), Expect = 5.6
Identities = 38/174 (21%), Positives = 67/174 (38%), Gaps = 14/174 (8%)
Query: 95 HQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTC 154
H P ++ + + T S ++ T T +++ T+ F
Sbjct: 60 HSTPSFTSLITITETTSHSTPSYTTSITTTETPSHSTPSYTTSITTTETPSHSTPSF--- 116
Query: 155 FENLNSTTITLTTSNSE-SIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLFS 213
+S T T TTS+S S S+ T E TTS+ + P+FTS++ ++ + +
Sbjct: 117 ---TSSITTTETTSHSTPSFTSSIRTTE----TTSY-STPSFTSSNTITETTSHSTPSYI 168
Query: 214 TINQTVEELNTNKESVIAIFVPAENSKPSVNSFISA--QKETTEMEDTDIEDSL 265
T T E +++ S + E + S F S+ ETT S+
Sbjct: 169 TSITTTETPSSSTPSFSSSITTTETTSHSTPGFTSSITTTETTSHSTPSFTSSI 222
Score = 28.9 bits (63), Expect = 7.3
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 159 NSTTITLTTSNSE-SIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQ 217
+S T T TTS+S S S+ T E TTSH + P+FTS ++ + ++T
Sbjct: 33 SSITTTETTSHSTPSFTSSISTTE----TTSH-STPSFTSLITITETTSHSTPSYTTSIT 87
Query: 218 TVEELNTNKESVIAIFVPAENSKPSVNSFISA--QKETTEMEDTDIEDSL 265
T E + + S E S SF S+ ETT S+
Sbjct: 88 TTETPSHSTPSYTTSITTTETPSHSTPSFTSSITTTETTSHSTPSFTSSI 137
>gi|13899259 THAP domain containing, apoptosis associated protein 2
[Homo sapiens]
Length = 228
Score = 45.1 bits (105), Expect = 1e-04
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 22/109 (20%)
Query: 1 MKRDSWVPSKYQFLCSDHFTPDSLDIRWGIRYLKQTAVPTIF--------------SLPE 46
++R ++VP K+ FLCS HF D+ R LK AVPTIF +L +
Sbjct: 39 VRRKNFVPGKHTFLCSKHFEASCFDLTGQTRRLKMDAVPTIFDFCTHIKSMKLKSRNLLK 98
Query: 47 DNQGKDPSKKKSQKKNLEDEKEVCPKAKSEESFVLN---ETKKNIVNTD 92
N P+ + K N+ ++ + E S+ E KK I+ +
Sbjct: 99 KNNSCSPAGPSNLKSNISSQQVLL-----EHSYAFRNPMEAKKRIIKLE 142
>gi|42734379 THAP domain containing, apoptosis associated protein 3
[Homo sapiens]
Length = 175
Score = 42.0 bits (97), Expect = 8e-04
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 3 RDSWVPSKYQFLCSDHFTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQ----GKDPSKKKS 58
R ++ P ++ +CS+HF P+ + LK AVPT+F+ + Q DP+ ++
Sbjct: 43 RGNFKPKQHTVICSEHFRPECFSAFGNRKNLKHNAVPTVFAFQDPTQQVRENTDPASERG 102
Query: 59 QKKNLEDEK------EVCPKAKSEE 77
+ + EK +V P+A + E
Sbjct: 103 NASSSQKEKTSPCRSQVLPEAGAGE 127
>gi|169208042 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 2 [Homo sapiens]
Length = 595
Score = 39.3 bits (90), Expect = 0.005
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 227 ESVIAIFVPAENSKPSVNSFISAQKETTEMEDTDIEDSLYK----DVDYGTEVLQIEHSY 282
ES ++ + E K + S S E+E + + +L K + + LQ+E
Sbjct: 173 ESALSAVIATEKKKANQLSSCSKAHTEWELEQSLQDQALLKAQLTQLKESFQQLQLERDE 232
Query: 283 CRQDINKEHL-W-QKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQE 330
C + I E W Q++SK+ +I L+ ++QQ + R++ LE + +LK +
Sbjct: 233 CAEHIEGERARWHQRMSKMSQEICTLKKEKQQDMRRVEELERSLSKLKNQ 282
>gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 632
Score = 39.3 bits (90), Expect = 0.005
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 227 ESVIAIFVPAENSKPSVNSFISAQKETTEMEDTDIEDSLYK----DVDYGTEVLQIEHSY 282
ES ++ + E K + S S E+E + + +L K + + LQ+E
Sbjct: 181 ESALSAVIATEKKKANQLSSCSKAHTEWELEQSLQDQALLKAQLTQLKESFQQLQLERDE 240
Query: 283 CRQDINKEHL-W-QKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQE 330
C + I E W Q++SK+ +I L+ ++QQ + R++ LE + +LK +
Sbjct: 241 CAEHIEGERARWHQRMSKMSQEICTLKKEKQQDMRRVEELERSLSKLKNQ 290
>gi|169208038 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 2 [Homo sapiens]
Length = 595
Score = 39.3 bits (90), Expect = 0.005
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 227 ESVIAIFVPAENSKPSVNSFISAQKETTEMEDTDIEDSLYK----DVDYGTEVLQIEHSY 282
ES ++ + E K + S S E+E + + +L K + + LQ+E
Sbjct: 173 ESALSAVIATEKKKANQLSSCSKAHTEWELEQSLQDQALLKAQLTQLKESFQQLQLERDE 232
Query: 283 CRQDINKEHL-W-QKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQE 330
C + I E W Q++SK+ +I L+ ++QQ + R++ LE + +LK +
Sbjct: 233 CAEHIEGERARWHQRMSKMSQEICTLKKEKQQDMRRVEELERSLSKLKNQ 282
>gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 632
Score = 39.3 bits (90), Expect = 0.005
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 227 ESVIAIFVPAENSKPSVNSFISAQKETTEMEDTDIEDSLYK----DVDYGTEVLQIEHSY 282
ES ++ + E K + S S E+E + + +L K + + LQ+E
Sbjct: 181 ESALSAVIATEKKKANQLSSCSKAHTEWELEQSLQDQALLKAQLTQLKESFQQLQLERDE 240
Query: 283 CRQDINKEHL-W-QKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQE 330
C + I E W Q++SK+ +I L+ ++QQ + R++ LE + +LK +
Sbjct: 241 CAEHIEGERARWHQRMSKMSQEICTLKKEKQQDMRRVEELERSLSKLKNQ 290
>gi|239749213 PREDICTED: mucin 3B, cell surface associated, partial
[Homo sapiens]
Length = 1063
Score = 38.1 bits (87), Expect = 0.012
Identities = 40/195 (20%), Positives = 76/195 (38%), Gaps = 10/195 (5%)
Query: 87 NIVNTDVPHQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKPESTLETSVNQDT 146
+IV T+ H SS P + +++T + + H+ P T + + T
Sbjct: 15 SIVTTETTSPHTPGFTSSITTTETIPHSTPTFTSLITTSEMTSHS-TPSLTFSITTTKST 73
Query: 147 GRG--GFHTCFENLNST-------TITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTS 197
F + + ST T ++TT+ + S T + + T+ + P+FTS
Sbjct: 74 SYSPPSFTSSITSTESTSHSTPPFTSSITTNETTSHSTPSFTTSITKTKTTSHSTPSFTS 133
Query: 198 NSMEIKSAQENPFLFSTINQTVEELNTNKESVIAIFVPAENSKPSVNSFISAQKETTEME 257
++ S + F++ T E + N S ++ + E + S SF S+ +T
Sbjct: 134 SNSITDSRSHSTPPFTSSVTTPEMTSHNTPSFMSSIITTETTSHSTPSFTSSTIHSTVSS 193
Query: 258 DTDIEDSLYKDVDYG 272
T S + + G
Sbjct: 194 STTAITSPFTTAETG 208
Score = 33.5 bits (75), Expect = 0.30
Identities = 40/144 (27%), Positives = 54/144 (37%), Gaps = 20/144 (13%)
Query: 113 KTGSIQNNMLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTCFENLNSTTITLTTSNSES 172
+T S T ++ K T + TS N T T + TT +T+ N+ S
Sbjct: 105 ETTSHSTPSFTTSITKTKTTSHSTPSFTSSNSITDSRSHSTPPFTSSVTTPEMTSHNTPS 164
Query: 173 IHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTVEELNTNKESVIAI 232
S+ T E TTSH + P+FTS STI+ TV T S
Sbjct: 165 FMSSIITTE----TTSH-STPSFTS---------------STIHSTVSSSTTAITSPFTT 204
Query: 233 FVPAENSKPSVNSFISAQKETTEM 256
S PS S +S TT +
Sbjct: 205 AETGVTSTPSSPSSLSTDIPTTSL 228
>gi|46852178 potassium channel modulatory factor 1 [Homo sapiens]
Length = 381
Score = 37.7 bits (86), Expect = 0.016
Identities = 48/224 (21%), Positives = 85/224 (37%), Gaps = 27/224 (12%)
Query: 14 LCSDHFTPDSLDIRWGIRYLKQTAVPTIFSLPEDNQGKDPSKKKSQKKNLEDEKEVCPKA 73
L +H P LD G+R++++ P G+ ++++ N+
Sbjct: 132 LTLEHRAPRDLDESSGVRHVRRMFHP----------GRGLGGPRARRSNMHFTSSSTGGL 181
Query: 74 KSEESFVLNETKKNIVNTDVPHQHPELLHSSSLVKPPA--------PKTGSIQNNMLTLN 125
S +S + N + ELL S V+ A P +Q + L
Sbjct: 182 SSSQS------SYSPSNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSASQLQQLQMQLQ 235
Query: 126 LVKQHTGKPESTLETSVNQDTGRGGFHTCFENLNSTTITLTTSNSESIHQSLETQEVLEV 185
L +QH LET+ N T R + + +T T +N+ES Q+L+ + L
Sbjct: 236 LERQHAQAARQQLETARNA-TRRTNTSSVTTTITQSTATTNIANTESSQQTLQNSQFLLT 294
Query: 186 TTSHLANPNFTSNSMEIKSAQENPFLFSTINQTV--EELNTNKE 227
+ SME + A + F+ + T+ EE +++ E
Sbjct: 295 RLNDPKMSETERQSMESERADRSLFVQELLLSTLVREESSSSDE 338
>gi|242117946 hypothetical protein LOC57579 isoform c [Homo sapiens]
Length = 1515
Score = 37.4 bits (85), Expect = 0.020
Identities = 69/322 (21%), Positives = 123/322 (38%), Gaps = 75/322 (23%)
Query: 35 QTAVPTIFSLPEDNQ-GKDPSKKKSQKKNLEDEKEVCPKAKSEESFVLNETKKNIVNTDV 93
Q+++ +I SLP D++ D + KKS V P+ +S +T N+ TD+
Sbjct: 834 QSSLTSINSLPSDDELSPDENSKKS----------VVPECHLNDS----KTVLNLGTTDL 879
Query: 94 PHQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKP--------------ESTLE 139
P S +L + +G++ N + ++ + P +S+
Sbjct: 880 PKCDDTKKSSITLQQQSVVFSGNLDNETVAIHSLNSSIKDPLQFVFSDEETSSDVKSSCS 939
Query: 140 TSVNQDTGRGGFHTCFENLNSTTITLTTSN-----------SESIHQSLETQE------- 181
+ N DT GF + ++ NST +T ++ S SI + + E
Sbjct: 940 SKPNLDTMCKGFQSPDKSNNSTGTAITLNSKLICLGTPCVISGSISSNTDVSEDRTMKKN 999
Query: 182 --VLEVTTSHLANPNFTSNSMEIKSAQENPFLFST--INQTVEELNTNKESVIAIFVPAE 237
VL +T + P S E +PF ST + Q + E +S I ++
Sbjct: 1000 SDVLNLTQMYSEIPTVES---ETHLGTSDPFSASTDIVKQGLVENYFGSQSSTDI---SD 1053
Query: 238 NSKPSVNSFISAQKETTEMEDTD------------------IEDSLYKDVDYGTEVLQIE 279
S ++ +S QKET+E E ++ +++ Y++ DY I
Sbjct: 1054 TCAVSYSNALSPQKETSEKEISNLQQEQDKEDEEEEQDQQMVQNGYYEETDYSALDGTIN 1113
Query: 280 HSYCRQDINKEHLWQKVSKLHS 301
Y +D E K K++S
Sbjct: 1114 AHYTSRDELMEERLTKSEKINS 1135
>gi|157671939 hypothetical protein LOC57579 isoform b [Homo sapiens]
Length = 1302
Score = 37.4 bits (85), Expect = 0.020
Identities = 69/322 (21%), Positives = 123/322 (38%), Gaps = 75/322 (23%)
Query: 35 QTAVPTIFSLPEDNQ-GKDPSKKKSQKKNLEDEKEVCPKAKSEESFVLNETKKNIVNTDV 93
Q+++ +I SLP D++ D + KKS V P+ +S +T N+ TD+
Sbjct: 621 QSSLTSINSLPSDDELSPDENSKKS----------VVPECHLNDS----KTVLNLGTTDL 666
Query: 94 PHQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKP--------------ESTLE 139
P S +L + +G++ N + ++ + P +S+
Sbjct: 667 PKCDDTKKSSITLQQQSVVFSGNLDNETVAIHSLNSSIKDPLQFVFSDEETSSDVKSSCS 726
Query: 140 TSVNQDTGRGGFHTCFENLNSTTITLTTSN-----------SESIHQSLETQE------- 181
+ N DT GF + ++ NST +T ++ S SI + + E
Sbjct: 727 SKPNLDTMCKGFQSPDKSNNSTGTAITLNSKLICLGTPCVISGSISSNTDVSEDRTMKKN 786
Query: 182 --VLEVTTSHLANPNFTSNSMEIKSAQENPFLFST--INQTVEELNTNKESVIAIFVPAE 237
VL +T + P S E +PF ST + Q + E +S I ++
Sbjct: 787 SDVLNLTQMYSEIPTVES---ETHLGTSDPFSASTDIVKQGLVENYFGSQSSTDI---SD 840
Query: 238 NSKPSVNSFISAQKETTEMEDTD------------------IEDSLYKDVDYGTEVLQIE 279
S ++ +S QKET+E E ++ +++ Y++ DY I
Sbjct: 841 TCAVSYSNALSPQKETSEKEISNLQQEQDKEDEEEEQDQQMVQNGYYEETDYSALDGTIN 900
Query: 280 HSYCRQDINKEHLWQKVSKLHS 301
Y +D E K K++S
Sbjct: 901 AHYTSRDELMEERLTKSEKINS 922
>gi|157671937 hypothetical protein LOC57579 isoform a [Homo sapiens]
Length = 1319
Score = 37.4 bits (85), Expect = 0.020
Identities = 69/322 (21%), Positives = 123/322 (38%), Gaps = 75/322 (23%)
Query: 35 QTAVPTIFSLPEDNQ-GKDPSKKKSQKKNLEDEKEVCPKAKSEESFVLNETKKNIVNTDV 93
Q+++ +I SLP D++ D + KKS V P+ +S +T N+ TD+
Sbjct: 638 QSSLTSINSLPSDDELSPDENSKKS----------VVPECHLNDS----KTVLNLGTTDL 683
Query: 94 PHQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKP--------------ESTLE 139
P S +L + +G++ N + ++ + P +S+
Sbjct: 684 PKCDDTKKSSITLQQQSVVFSGNLDNETVAIHSLNSSIKDPLQFVFSDEETSSDVKSSCS 743
Query: 140 TSVNQDTGRGGFHTCFENLNSTTITLTTSN-----------SESIHQSLETQE------- 181
+ N DT GF + ++ NST +T ++ S SI + + E
Sbjct: 744 SKPNLDTMCKGFQSPDKSNNSTGTAITLNSKLICLGTPCVISGSISSNTDVSEDRTMKKN 803
Query: 182 --VLEVTTSHLANPNFTSNSMEIKSAQENPFLFST--INQTVEELNTNKESVIAIFVPAE 237
VL +T + P S E +PF ST + Q + E +S I ++
Sbjct: 804 SDVLNLTQMYSEIPTVES---ETHLGTSDPFSASTDIVKQGLVENYFGSQSSTDI---SD 857
Query: 238 NSKPSVNSFISAQKETTEMEDTD------------------IEDSLYKDVDYGTEVLQIE 279
S ++ +S QKET+E E ++ +++ Y++ DY I
Sbjct: 858 TCAVSYSNALSPQKETSEKEISNLQQEQDKEDEEEEQDQQMVQNGYYEETDYSALDGTIN 917
Query: 280 HSYCRQDINKEHLWQKVSKLHS 301
Y +D E K K++S
Sbjct: 918 AHYTSRDELMEERLTKSEKINS 939
>gi|169208018 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 595
Score = 36.6 bits (83), Expect = 0.035
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 227 ESVIAIFVPAENSKPSVNSFISAQKETTEMEDTDIEDSLYK----DVDYGTEVLQIEHSY 282
E ++ + E K + S S E+E + + +L K + + LQ+E
Sbjct: 173 ERALSAVIATEKKKANQLSSCSKAHTEWELEQSLQDQALLKAQLTQLKESFQQLQLERDE 232
Query: 283 CRQDINKEHL-W-QKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQE 330
C + I E W Q++SK+ +I L+ ++QQ + R++ LE + +LK +
Sbjct: 233 CAEHIEGERARWHQRMSKMLQEICTLKKEKQQDMRRVEELERSLSKLKNQ 282
>gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 4 [Homo sapiens]
Length = 632
Score = 36.6 bits (83), Expect = 0.035
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 227 ESVIAIFVPAENSKPSVNSFISAQKETTEMEDTDIEDSLYK----DVDYGTEVLQIEHSY 282
E ++ + E K + S S E+E + + +L K + + LQ+E
Sbjct: 181 ERALSAVIATEKKKANQLSSCSKAHTEWELEQSLQDQALLKAQLTQLKESFQQLQLERDE 240
Query: 283 CRQDINKEHL-W-QKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQE 330
C + I E W Q++SK+ +I L+ ++QQ + R++ LE + +LK +
Sbjct: 241 CAEHIEGERARWHQRMSKMLQEICTLKKEKQQDMRRVEELERSLSKLKNQ 290
>gi|120953300 leucine-rich repeats and IQ motif containing 1 isoform
1 [Homo sapiens]
Length = 1722
Score = 36.6 bits (83), Expect = 0.035
Identities = 65/310 (20%), Positives = 130/310 (41%), Gaps = 39/310 (12%)
Query: 56 KKSQKKNLEDEKEVCPKAKSEESFVLNETKKNIVNTDVPHQHPELLHSSSLVKPPAPKTG 115
K+ +KK E+E++ K E+ ++ + ++ +++ + + S L+ A K
Sbjct: 346 KEERKKQKEEERKRREKEYEEKKNIVKQEREQLISKEKIILREDA--SQQLIISSALKKS 403
Query: 116 SIQNNMLTL------------NLVKQHTGKPESTLETSVNQDTGRGGFHTCFENLNSTTI 163
N L+L NLV +++ K E L V + + EN++ TI
Sbjct: 404 GYNNKHLSLEDISNDKGDIAKNLVDENSKKQEDVLLWLVEESNMK-------ENVDRQTI 456
Query: 164 TLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTVEELN 223
L S + +S+ +Q +L N N + ++ +T N+T E N
Sbjct: 457 -LKESIQVKLKESISSQTILADFKMEEKNENLAKKRCSEELVKQERKYENTDNKT-ELGN 514
Query: 224 TNKESVIAIFVPAENSKPSVNSFISAQKETTEMEDTDIEDSLYKD---VDYGTEVLQIEH 280
++ + + P + K AQKE M+ E++ K + + E+ +++
Sbjct: 515 SDLKGNLKEQFPLQELKS------DAQKEEKIMKHVINENTGQKTQIILGHNQEISEVKT 568
Query: 281 SYCRQDINKEHLWQKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQENW-LSEENVK 339
+ Q I K++ +K+ K+ + E++EQ L K + L+ +KQ + L+ EN K
Sbjct: 569 NE-EQKIIKDNQQKKIQKVEKE----EIQEQNGL-LYKDKDTLVISVKQRSLSLTSENSK 622
Query: 340 IIENHFTTYE 349
+ + E
Sbjct: 623 DVRENVILQE 632
>gi|120953243 leucine-rich repeats and IQ motif containing 1 isoform
2 [Homo sapiens]
Length = 1336
Score = 36.6 bits (83), Expect = 0.035
Identities = 65/310 (20%), Positives = 130/310 (41%), Gaps = 39/310 (12%)
Query: 56 KKSQKKNLEDEKEVCPKAKSEESFVLNETKKNIVNTDVPHQHPELLHSSSLVKPPAPKTG 115
K+ +KK E+E++ K E+ ++ + ++ +++ + + S L+ A K
Sbjct: 346 KEERKKQKEEERKRREKEYEEKKNIVKQEREQLISKEKIILREDA--SQQLIISSALKKS 403
Query: 116 SIQNNMLTL------------NLVKQHTGKPESTLETSVNQDTGRGGFHTCFENLNSTTI 163
N L+L NLV +++ K E L V + + EN++ TI
Sbjct: 404 GYNNKHLSLEDISNDKGDIAKNLVDENSKKQEDVLLWLVEESNMK-------ENVDRQTI 456
Query: 164 TLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTVEELN 223
L S + +S+ +Q +L N N + ++ +T N+T E N
Sbjct: 457 -LKESIQVKLKESISSQTILADFKMEEKNENLAKKRCSEELVKQERKYENTDNKT-ELGN 514
Query: 224 TNKESVIAIFVPAENSKPSVNSFISAQKETTEMEDTDIEDSLYKD---VDYGTEVLQIEH 280
++ + + P + K AQKE M+ E++ K + + E+ +++
Sbjct: 515 SDLKGNLKEQFPLQELKS------DAQKEEKIMKHVINENTGQKTQIILGHNQEISEVKT 568
Query: 281 SYCRQDINKEHLWQKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQENW-LSEENVK 339
+ Q I K++ +K+ K+ + E++EQ L K + L+ +KQ + L+ EN K
Sbjct: 569 NE-EQKIIKDNQQKKIQKVEKE----EIQEQNGL-LYKDKDTLVISVKQRSLSLTSENSK 622
Query: 340 IIENHFTTYE 349
+ + E
Sbjct: 623 DVRENVILQE 632
>gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens]
Length = 967
Score = 36.2 bits (82), Expect = 0.046
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 160 STTITLTTSNSESIHQSLETQEVLEVT--TSHLANPNFTSNSMEIKSAQENPFLFSTINQ 217
S T +TT+ S S H L V+ T TSH + P+FTS+ ++ P F+++
Sbjct: 292 SFTSLITTTESTS-HSPLSFTSVITTTESTSH-STPSFTSSIATTETTSHTPPSFTSLIT 349
Query: 218 TVEELNTNKESVIAIFVPAENSKPSVNSFISA 249
T E + + S ++ E++ S SF SA
Sbjct: 350 TTETPSHSNPSFTSLITATESTSHSPPSFTSA 381
Score = 35.4 bits (80), Expect = 0.078
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 160 STTITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTV 219
S T +TT+ + S+ T + T+ + P+FTS+ ++ +P F+++ T
Sbjct: 241 SFTSLMTTTETTSLSPPAFTFSISTTETNSHSPPSFTSSIATTETPSHSPPSFTSLITTT 300
Query: 220 EELNTNKESVIAIFVPAENSKPSVNSFIS--AQKETT 254
E + + S ++ E++ S SF S A ETT
Sbjct: 301 ESTSHSPLSFTSVITTTESTSHSTPSFTSSIATTETT 337
Score = 32.7 bits (73), Expect = 0.50
Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 10/170 (5%)
Query: 95 HQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTC 154
H S + + + T SI +++ T + S++ TS F +
Sbjct: 135 HSTASFTSSITTTETTSHSTRSITSSITTTKRTSHSSLSYTSSIATSETPSHTVPSFTSL 194
Query: 155 FENLNST-------TITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTS--NSMEIKSA 205
ST T +TT+ + S + T + + T+ + P+FTS + E S
Sbjct: 195 ITTTESTSHSNPSLTSAITTTETRSHSPPIFTSSITTIETTSHSTPSFTSLMTTTETTSL 254
Query: 206 QENPFLFS-TINQTVEELNTNKESVIAIFVPAENSKPSVNSFISAQKETT 254
F FS + +T + S IA +S PS S I+ + T+
Sbjct: 255 SPPAFTFSISTTETNSHSPPSFTSSIATTETPSHSPPSFTSLITTTESTS 304
Score = 32.7 bits (73), Expect = 0.50
Identities = 34/163 (20%), Positives = 67/163 (41%), Gaps = 11/163 (6%)
Query: 93 VPHQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKPESTLETSVNQDTGRGGFH 152
+ H P S + + P+ T S ++ T + T S + T+ GF
Sbjct: 697 ISHSTPSYTSSIATTETPSHSTPSFPFSITTTETIPHSTPSLNSAITTTETMSHSIPGF- 755
Query: 153 TCFENLNSTTITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLF 212
+S T + TTS SL T TTSH + P+FT++ ++ +P F
Sbjct: 756 -----ASSITTSETTSPFPPRFTSLITTTK---TTSH-SPPSFTASLTSTEATSHSPLSF 806
Query: 213 STINQTVEELNTNKESVIAIFVPAENSKPSVNSFISAQKETTE 255
+++ + + + + S+ ++ S + +S+ +TT+
Sbjct: 807 TSVIASTKITSQSTPSLTSLITTTGTSSHNTLG-LSSSVDTTK 848
Score = 29.3 bits (64), Expect = 5.6
Identities = 33/160 (20%), Positives = 64/160 (40%), Gaps = 8/160 (5%)
Query: 89 VNTDVPHQHPELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKPESTLETSVNQDTGR 148
+ T H L ++SS+ P + +L + T +L +++ R
Sbjct: 161 ITTTKRTSHSSLSYTSSIATSETPS--HTVPSFTSLITTTESTSHSNPSLTSAITTTETR 218
Query: 149 GGFHTCFENLNSTTITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQEN 208
F + + TTI T+ ++ S + T E T+ L+ P FT + ++ +
Sbjct: 219 SHSPPIFTS-SITTIETTSHSTPSFTSLMTTTE-----TTSLSPPAFTFSISTTETNSHS 272
Query: 209 PFLFSTINQTVEELNTNKESVIAIFVPAENSKPSVNSFIS 248
P F++ T E + + S ++ E++ S SF S
Sbjct: 273 PPSFTSSIATTETPSHSPPSFTSLITTTESTSHSPLSFTS 312
Score = 28.9 bits (63), Expect = 7.3
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 7/95 (7%)
Query: 162 TITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLF---STINQT 218
T T TTS+S +L T TTSH + P+FTS+ ++ +P F ST +T
Sbjct: 505 TTTKTTSHSPPSFTALITSTK---TTSH-STPSFTSSIATTETTSHSPPSFTSSSTTTET 560
Query: 219 VEELNTNKESVIAIFVPAENSKPSVNSFISAQKET 253
S IA S P I+ K T
Sbjct: 561 HSHSTPGFSSSIATSKTTSTSPPRFTFAIATTKTT 595
Score = 28.9 bits (63), Expect = 7.3
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 7/128 (5%)
Query: 140 TSVNQDTGRGGFHTCFENLNSTTITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNS 199
TS+ TG +T + + T T+ ++ S + T E TTSH P FTS+
Sbjct: 824 TSLITTTGTSSHNTLGLSSSVDTTKTTSHSTASFTSLIATTE----TTSH-NTPGFTSSI 878
Query: 200 MEIKSAQENPFLFSTINQTVEELNTNKESVIAIFVPAENSKPSVNSFISA--QKETTEME 257
+ + F++ T+E + + S ++ ++ S SF S+ ETT
Sbjct: 879 ATTEITSHSTPSFTSSITTMETTSRSSPSFTSLITITGSTSHSTASFTSSITTTETTSHS 938
Query: 258 DTDIEDSL 265
I S+
Sbjct: 939 TPSITSSV 946
Score = 28.5 bits (62), Expect = 9.5
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 162 TITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTVEE 221
T T+ N+ S+ T E+ TSH + P+FTS+S ++ + FS+ T E
Sbjct: 10 TTETTSQNTPGFTSSIATTEI----TSH-SPPSFTSSSTTTETPSHSTPGFSSSIATTET 64
Query: 222 LNTNKESVIAIFVPAENSKPSVNSFISA 249
+ + S + E ++ F S+
Sbjct: 65 TSHSTASFTSSIATTETMSQNIPGFTSS 92
>gi|239752529 PREDICTED: similar to mucin [Homo sapiens]
Length = 594
Score = 36.2 bits (82), Expect = 0.046
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 160 STTITLTTSNSESIHQSLETQEVLEVT--TSHLANPNFTSNSMEIKSAQENPFLFSTINQ 217
S T +TT+ S S H L V+ T TSH + P+FTS+ ++ P F+++
Sbjct: 121 SFTSLITTTESTS-HSPLSFTSVITTTESTSH-STPSFTSSIATTETTSHTPPSFTSLIT 178
Query: 218 TVEELNTNKESVIAIFVPAENSKPSVNSFISA 249
T E + + S ++ E++ S SF SA
Sbjct: 179 TTETPSHSNPSFTSLITATESTSHSPPSFTSA 210
Score = 35.4 bits (80), Expect = 0.078
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 160 STTITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTV 219
S T +TT+ + S+ T + T+ + P+FTS+ ++ +P F+++ T
Sbjct: 70 SFTSLMTTTETTSLSPPAFTFSISTTETNSHSPPSFTSSIATTETPSHSPPSFTSLITTT 129
Query: 220 EELNTNKESVIAIFVPAENSKPSVNSFIS--AQKETT 254
E + + S ++ E++ S SF S A ETT
Sbjct: 130 ESTSHSPLSFTSVITTTESTSHSTPSFTSSIATTETT 166
Score = 32.0 bits (71), Expect = 0.86
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 160 STTITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTS--NSMEIKSAQENPFLFS-TIN 216
S T +TT+ + S + T + + T+ + P+FTS + E S F FS +
Sbjct: 36 SLTSAITTTETRSHSPPIFTSSITTIETTSHSTPSFTSLMTTTETTSLSPPAFTFSISTT 95
Query: 217 QTVEELNTNKESVIAIFVPAENSKPSVNSFISAQKETT 254
+T + S IA +S PS S I+ + T+
Sbjct: 96 ETNSHSPPSFTSSIATTETPSHSPPSFTSLITTTESTS 133
Score = 29.3 bits (64), Expect = 5.6
Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 18/170 (10%)
Query: 98 PELLHSSSLVKPPAPKTGSIQNNMLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTCFEN 157
P + + + P+ T S +++ T T S + T+ F +
Sbjct: 386 PSYISLIATTETPSHSTPSFPSSITTTQSASHSTPSLTSAISTTEAMSHSIPVFTSLITT 445
Query: 158 LNST-----------TITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQ 206
+T T T TTS+S +L T TTSH + P+FTS+ ++
Sbjct: 446 TETTSHLPPRFTSLITTTKTTSHSPPSFTALITSTK---TTSH-STPSFTSSIATTETTS 501
Query: 207 ENPFLF---STINQTVEELNTNKESVIAIFVPAENSKPSVNSFISAQKET 253
+P F ST +T S IA S P I+ K T
Sbjct: 502 HSPPSFTSSSTTTETHSHSTPGFSSSIATSKTTSTSPPRFTFAIATTKTT 551
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 36.2 bits (82), Expect = 0.046
Identities = 62/320 (19%), Positives = 128/320 (40%), Gaps = 49/320 (15%)
Query: 61 KNLEDEKEVCPKAK-----SEESFVLNETKKNIVNTDVPHQHPELLHSSSLVKPPAPKTG 115
+NL+ EKE+ ++ ES + + +N++ T++ L S + K
Sbjct: 782 ENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETK------- 834
Query: 116 SIQNNMLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTCFENLNSTTITLTTSNSESIHQ 175
Q + ++ + LE V Q HT NL+ + +
Sbjct: 835 --QRLSSQIEKLEHEISHLKKKLENEVEQR------HTLTRNLDVQLLDTKRQLDTETNL 886
Query: 176 SLETQEVLEVTTSHLANPNFTSNSMEIKSAQEN---------------PFLFSTINQTVE 220
L T+E+L+ +A ++ME++ A ++ L S + QT E
Sbjct: 887 HLNTKELLKNAQKEIATLKQHLSNMEVQVASQSSQRTGKGQPSNKEDVDDLVSQLRQTEE 946
Query: 221 ELNTNKESVIAIFVPAENSKPSVNSF---ISAQKETTEMEDTDIEDSLYKDVDYGTE--- 274
++N KE + E + V S ++ +K+ TE +IE L + ++ T+
Sbjct: 947 QVNDLKERLKTSTSNVEQYQAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEK 1006
Query: 275 -VLQIEHSYCRQDINK----EHLWQKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQ 329
++++E +K E + Q++S+L ++ ++ + Q+ L R + + +Q ++
Sbjct: 1007 KLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSVQNEVQEALQRASTALSNEQQARR 1066
Query: 330 ENWLSEENVKIIENHFTTYE 349
+ +E KI YE
Sbjct: 1067 D---CQEQAKIAVEAQNKYE 1083
>gi|124249396 coiled-coil domain containing 30 [Homo sapiens]
Length = 783
Score = 35.8 bits (81), Expect = 0.060
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 277 QIEHSYCRQDINKEHLWQKVSKLHSKITLLELKEQ-------QTLGRLKSLEALIRQLKQ 329
+++ Y + ++ L+Q V +LH ++ L+ KE Q R++ EAL++QL+
Sbjct: 395 KVKQQYQEEQQKRKLLYQNVDELHRQVRTLQDKENLLEMTCSQQQSRIQQQEALLKQLEN 454
Query: 330 ENWLSEENVK 339
E +E+VK
Sbjct: 455 EKRKYDEHVK 464
>gi|81295809 pericentrin [Homo sapiens]
Length = 3336
Score = 35.8 bits (81), Expect = 0.060
Identities = 58/283 (20%), Positives = 110/283 (38%), Gaps = 51/283 (18%)
Query: 52 DPSKKKSQKKNLEDEKEVCPKAKSEESFVLNETKKNIVNTDVPHQHPELLHSSSLVKPPA 111
+ + K + +K L E C ++E L+E +K D+ + L S ++
Sbjct: 2711 EQTAKDNLQKELRIEHSRCEALLAQERSQLSELQK-----DLAAEKSRTLELSEALR--- 2762
Query: 112 PKTGSIQNNMLTLNLVKQHTGKPESTLETSVNQDTGRGGFHTCFENLN---STTITLTTS 168
+LT L ++ T E V+QDT H + L S + L
Sbjct: 2763 ------HERLLTEQLSQR-------TQEACVHQDTQ--AHHALLQKLKEEKSRVVDLQAM 2807
Query: 169 NSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTVEELNTNKES 228
+ Q+L +Q+ LE ++ + + +T+ TVE L+T K
Sbjct: 2808 LEKVQQQALHSQQQLEAEAQK-----------HCEALRREKEVSATLKSTVEALHTQKRE 2856
Query: 229 VIAIFVPAENSKPSVNSFISAQKETTEMEDTDIEDSLYKDVDYGTEVLQIEHSYCRQDIN 288
+ + E KP+ ++ A+ E + + E G + + + RQ
Sbjct: 2857 -LRCSLEREREKPA---WLQAELEQSHPRLKEQE---------GRKAAR-RSAEARQSPA 2902
Query: 289 KEHLWQKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQEN 331
W+K + K+ LEL+ Q+ L ++K L+ +R L+ ++
Sbjct: 2903 AAEQWRKWQRDKEKLRELELQRQRDLHKIKQLQQTVRDLESKD 2945
>gi|8923885 myoneurin [Homo sapiens]
Length = 610
Score = 35.8 bits (81), Expect = 0.060
Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 15/166 (9%)
Query: 136 STLETSVNQDTGR---GGFHTCFENLNSTTITLTTSNSESIHQSLETQEVLEVTT----- 187
ST E +V D + GF E + + T+ L + N + IHQ+ + +V EV T
Sbjct: 55 STSENNVFLDQSQVKADGFQKLLEFIYTGTLNLDSWNVKEIHQAADYLKVEEVVTKCKIK 114
Query: 188 ----SHLANPNFTSNSMEIKSAQENPFLFSTINQTVEELNTNKESVIAIFVPAENSKPSV 243
+ +ANP+ T S + + N T T+ + N ++S ++ + N K
Sbjct: 115 MEDFAFIANPSSTEISSITGNIELNQ---QTCLLTLRDYNNREKSEVSTDLIQANPKQGA 171
Query: 244 NSFISAQKETTEMEDTDIEDSLYKDVDYGTEVLQIEHSYCRQDINK 289
+ S+Q + + + K V Y +++L+ D NK
Sbjct: 172 LAKKSSQTKKKKKAFNSPKTGQNKTVQYPSDILENASVELFLDANK 217
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 35.4 bits (80), Expect = 0.078
Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 20/184 (10%)
Query: 167 TSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQENPFLFSTINQTVEELNTNK 226
T + + Q + ++ LE T L+ N+ ++ AQ N + I+ V L TN+
Sbjct: 969 TLKKKLLDQEAKLKKELENTALELSQKEKQFNAKMLEMAQANS---AGISDAVSRLETNQ 1025
Query: 227 ESVIAIFVPAENSKPSVNSFISA--------QKETTEMEDTDIEDSLYKDVDYGTEVLQI 278
+ I E + +N IS +E E+ + +++ + + ++L
Sbjct: 1026 KEQIESLT--EVHRRELNDVISIWEKKLNQQAEELQEIHEIQLQEKEQEVAELKQKILLF 1083
Query: 279 EHSYCRQDINKEHLWQKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQENWLSEENV 338
++++NKE W K + TL EL+EQ LK A + L Q+ + ++
Sbjct: 1084 GCE--KEEMNKEITWLKEEGVKQDTTLNELQEQ-----LKQKSAHVNSLAQDETKLKAHL 1136
Query: 339 KIIE 342
+ +E
Sbjct: 1137 EKLE 1140
Score = 34.3 bits (77), Expect = 0.17
Identities = 45/204 (22%), Positives = 95/204 (46%), Gaps = 27/204 (13%)
Query: 163 ITLTTSNSE--SIHQSLETQEVLEVTTSHLANPNF-TSNSMEIKSAQENPFLF------- 212
+ L S SE I Q E QE L + L T + +++ Q+ +
Sbjct: 513 VALEKSQSEYLKISQEKEQQESLALEELELQKKAILTESENKLRDLQQEAETYRTRILEL 572
Query: 213 -STINQTVEELNTNKESVIAIFVPAENSKPSVNSFISAQKETTEMED-TDIEDSLYKD-- 268
S++ ++++E N N+ +A+ + AE +K + + +K TE+E +D+L+ +
Sbjct: 573 ESSLEKSLQE-NKNQSKDLAVHLEAEKNKHNKEITVMVEKHKTELESLKHQQDALWTEKL 631
Query: 269 ----VDYGTEVLQIEHSYCRQD-----INKEHLWQKVSKLHSKITLLELKEQQTLGRLKS 319
Y TE+ ++ C Q+ +KE ++Q + ++ TL +L +QT L+S
Sbjct: 632 QVLKQQYQTEMEKLREK-CEQEKETLLKDKEIIFQAHIEEMNEKTLEKLDVKQT--ELES 688
Query: 320 LEALIRQLKQENWLSEENVKIIEN 343
L + + ++ + EE + ++++
Sbjct: 689 LSSELSEVLKARHKLEEELSVLKD 712
>gi|94536788 THAP domain containing 9 [Homo sapiens]
Length = 903
Score = 35.0 bits (79), Expect = 0.10
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 6 WVPSKYQFLCSDHFTPDSLDIRWGIRYLKQTAVPTI--FSLPEDNQGKDPSKKKSQKKNL 63
W+P LCS HF + R LK+ AVP++ + +P+ K +++K K+ L
Sbjct: 53 WIPGPGAILCSKHFQESDFESYGIRRKLKKGAVPSVSLYKIPQGVHLKGKARQKILKQPL 112
Query: 64 EDEKE 68
D +
Sbjct: 113 PDNSQ 117
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 35.0 bits (79), Expect = 0.10
Identities = 63/316 (19%), Positives = 119/316 (37%), Gaps = 56/316 (17%)
Query: 55 KKKSQKKNLEDEKEVCPKAKSEESFVLNETKKNIVNTDVPHQHPELLHSSSLVKPPAPKT 114
++K KK+LE EKE + K E LN ++ +L+ + + +K +
Sbjct: 911 EQKELKKSLEKEKEASHQLKLE----LNSMQE------------QLIQAQNTLKQNEKEE 954
Query: 115 GSIQNNMLTLNLVKQHTGK--------------PESTLETSVNQDTGRGGFHTCFENLNS 160
+Q N+ L + K ++ LE + Q + E
Sbjct: 955 QQLQGNINELKQSSEQKKKQIEALQGELKIAVLQKTELENKLQQQLTQAAQELAAEKEKI 1014
Query: 161 TTITLTTSNSESIHQSLETQEVLEVTTSHLANPNFTSNSMEIKSAQE----NPFLFSTIN 216
+ + S+ + L++ + + S ++ AQE N N
Sbjct: 1015 SVLQNNYEKSQETFKQLQSDFYGRESELLATRQDLKSVEEKLSLAQEDLISNRNQIGNQN 1074
Query: 217 QTVEELNTNKESVIAIFVPAENSKPSVNSFISAQKETTEMEDTDIEDSLYKD--VDYGTE 274
+ ++EL T K ++ + S Q+ ++D E SL + V+ ++
Sbjct: 1075 KLIQELKTAKATL---------EQDSAKKEQQLQERCKALQDIQKEKSLKEKELVNEKSK 1125
Query: 275 VLQIEHSYCRQ--DINKEHLWQKVSKLHSKITLLELKEQQTL---------GRLKSLEAL 323
+ +IE CRQ +I K + K KL S + LK+ + L G+ SL+A
Sbjct: 1126 LAEIEEIKCRQEKEITKLNEELKSHKLESIKEITNLKDAKQLLIQQKLELQGKADSLKAA 1185
Query: 324 IRQLKQENWLSEENVK 339
+ Q K+ + ++ VK
Sbjct: 1186 VEQEKRNQQILKDQVK 1201
Score = 29.3 bits (64), Expect = 5.6
Identities = 25/122 (20%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 215 INQTVEELNTNKESVIAIFVPAENSKPSVNSFISAQKETTEMEDTDIEDSLYKDVDYGTE 274
I T+ + + + + + + +E S ++ +S + E T+ ++ + K E
Sbjct: 335 IQATLHQKDLDCQQLQSRLSASETSLHRIHVELSEKGEATQKLKEELSEVETKYQHLKAE 394
Query: 275 VLQIEHSYCRQDINKEHLWQKVSKLHSKITLLELKEQQTLGRLKSLEALIRQLKQENWLS 334
Q++ ++ + L ++++LHSK+ E + + GRLK RQL E +
Sbjct: 395 FKQLQQQREEKEQHGLQLQSEINQLHSKLLETERQLGEAHGRLKEQ----RQLSSEKLMD 450
Query: 335 EE 336
+E
Sbjct: 451 KE 452
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.125 0.350
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,258,361
Number of Sequences: 37866
Number of extensions: 598075
Number of successful extensions: 2753
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 2603
Number of HSP's gapped (non-prelim): 261
length of query: 353
length of database: 18,247,518
effective HSP length: 103
effective length of query: 250
effective length of database: 14,347,320
effective search space: 3586830000
effective search space used: 3586830000
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.