Guide to the Human Genome
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Name: HSPBP1 Sequence: fasta or formatted (359aa) NCBI GI: 194294548
Description:

hsp70-interacting protein

Referenced in:

Heat-Shock Proteins and Chaperonins

Other entries for this name:
alt mRNA [359aa] hsp70-interacting protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         33           2
 C cysteine            3.6         13           1
 D aspartate           3.9         14           2
 E glutamate           9.5         34           2
 F phenylalanine       2.8         10           1
 G glycine             8.9         32           6
 H histidine           2.2          8           1
 I isoleucine          1.1          4           1
 K lysine              2.2          8           1
 L leucine            14.8         53           2
 M methionine          3.6         13           1
 N asparagine          1.7          6           1
 P proline             5.0         18           3
 Q glutamine           8.6         31           3
 R arginine            7.2         26           2
 S serine              7.2         26           2
 T threonine           2.2          8           1
 V valine              5.0         18           1
 W tryptophan          0.6          2           1
 Y tyrosine            0.6          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hsp70-interacting protein 
HSPBP1                1.000   hsp70-interacting protein 
SIL1                  0.042   SIL1 protein precursor 
SIL1                  0.042   SIL1 protein precursor 
LZTS2                 0.025   leucine zipper, putative tumor suppressor 2 
DHX57                 0.020   DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 
POU3F3                0.019   POU class 3 homeobox 3 
CAPNS1                0.019   calpain, small subunit 1 
CAPNS1                0.019   calpain, small subunit 1 
TRIO                  0.019   triple functional domain (PTPRF interacting) 
ZNF839                0.017   zinc finger protein 839 
FOXD1                 0.017   forkhead box D1 
GSPT1                 0.017   G1 to S phase transition 1 isoform 2 
GSPT1                 0.017   G1 to S phase transition 1 isoform 1 
TMCO6                 0.017   transmembrane and coiled-coil domains 6 
RERE                  0.016   atrophin-1 like protein isoform b 
RERE                  0.016   atrophin-1 like protein isoform a 
RERE                  0.016   atrophin-1 like protein isoform a 
LOR                   0.014   loricrin 
CADPS                 0.014   Ca2+-dependent secretion activator isoform 2 
CADPS                 0.014   Ca2+-dependent secretion activator isoform 1 
CADPS                 0.014   Ca2+-dependent secretion activator isoform 3 
MCTP1                 0.014   multiple C2 domains, transmembrane 1 isoform L [Hom...
SYNGAP1               0.014   synaptic Ras GTPase activating protein 1 
MNX1                  0.014   homeo box HB9 
MTMR1                 0.014   myotubularin-related protein 1 
XYLT1                 0.014   xylosyltransferase I 
BRD2                  0.014   bromodomain containing 2 
BRD2                  0.014   bromodomain containing 2 
DMKN                  0.014   dermokine isoform 4 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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