TMCO6 37498

Name: TMCO6	Sequence: fasta or formatted (493aa)		NCBI GI: 94536840
Description: transmembrane and coiled-coil domains 6		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.3 46 2 C cysteine 2.6 13 1 D aspartate 1.6 8 1 E glutamate 8.5 42 2 F phenylalanine 2.4 12 3 G glycine 5.7 28 2 H histidine 2.2 11 1 I isoleucine 2.8 14 2 K lysine 1.6 8 1 L leucine 19.5 96 4 M methionine 1.2 6 1 N asparagine 2.2 11 2 P proline 5.1 25 1 Q glutamine 8.5 42 2 R arginine 6.3 31 5 S serine 6.5 32 2 T threonine 4.5 22 1 V valine 6.9 34 2 W tryptophan 0.8 4 1 Y tyrosine 1.6 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane and coiled-coil domains 6 KPNA7 0.043 karyopherin 7 KPNA6 0.039 karyopherin alpha 6 KPNA5 0.036 karyopherin alpha 5 KPNA2 0.033 karyopherin alpha 2 KPNA4 0.029 karyopherin alpha 4 KPNA1 0.027 karyopherin alpha 1 KPNA3 0.027 karyopherin alpha 3 ARMC8 0.020 armadillo repeat containing 8 isoform 2 RAP1GDS1 0.018 RAP1, GTP-GDP dissociation stimulator 1 isoform 5 [... RAP1GDS1 0.018 RAP1, GTP-GDP dissociation stimulator 1 isoform 4 [... ARMC8 0.017 armadillo repeat containing 8 isoform 3 ARMC8 0.017 armadillo repeat containing 8 isoform 1 RAP1GDS1 0.015 RAP1, GTP-GDP dissociation stimulator 1 isoform 3 [... RAP1GDS1 0.015 RAP1, GTP-GDP dissociation stimulator 1 isoform 2 [... RAP1GDS1 0.015 RAP1, GTP-GDP dissociation stimulator 1 isoform 1 [... DEF6 0.014 differentially expressed in FDCP 6 homolog SPAG6 0.013 sperm associated antigen 6 isoform 1 SPAG6 0.013 sperm associated antigen 6 isoform 2 HSPBP1 0.013 hsp70-interacting protein HSPBP1 0.013 hsp70-interacting protein SLC22A6 0.012 solute carrier family 22 member 6 isoform c ACBD3 0.011 acyl-Coenzyme A binding domain containing 3 TCHH 0.011 trichohyalin ZYG11B 0.010 zyg-11 homolog B GIMAP4 0.010 GTPase, IMAP family member 4 GIGYF2 0.009 GRB10 interacting GYF protein 2 isoform c GIGYF2 0.009 GRB10 interacting GYF protein 2 isoform a GIGYF2 0.009 GRB10 interacting GYF protein 2 isoform b GIGYF2 0.009 GRB10 interacting GYF protein 2 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.