Search of human proteins with 113416897

Search of human proteins with 113416897

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|113416897 PREDICTED: similar to high mobility group box 3
isoform 1 [Homo sapiens]
         (201 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho...   415   e-116
gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho...   415   e-116
gi|113416897 PREDICTED: similar to high mobility group box 3 iso...   415   e-116
gi|239742753 PREDICTED: similar to high mobility group box 3 iso...   339   8e-94
gi|71143137 high-mobility group box 3 [Homo sapiens]                  337   3e-93
gi|169212060 PREDICTED: high mobility group protein B3-like prot...   306   6e-84
gi|239745831 PREDICTED: high mobility group protein B3-like prot...   306   6e-84
gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho...   303   6e-83
gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho...   303   6e-83
gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho...   303   6e-83
gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]          287   5e-78
gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]          287   5e-78
gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo sap...   287   5e-78
gi|194688135 high-mobility group box 2 [Homo sapiens]                 252   2e-67
gi|194688133 high-mobility group box 2 [Homo sapiens]                 252   2e-67
gi|11321591 high-mobility group box 2 [Homo sapiens]                  252   2e-67
gi|4504425 high-mobility group box 1 [Homo sapiens]                   251   2e-67
gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]           241   4e-64
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]          187   7e-48
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]          187   7e-48
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]          187   7e-48
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]            185   2e-47
gi|57232750 HMG2 like isoform 1 [Homo sapiens]                        122   2e-28
gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]          119   1e-27
gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]          119   1e-27
gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]          111   4e-25
gi|4507241 structure specific recognition protein 1 [Homo sapiens]     82   3e-16
gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens]       71   7e-13
gi|7662322 thymus high mobility group box protein TOX [Homo sapi...    70   1e-12
gi|149408144 TOX high mobility group box family member 2 isoform...    70   1e-12

>gi|169168462 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  415 bits (1067), Expect = e-116
 Identities = 201/201 (100%), Positives = 201/201 (100%)

Query: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSKKCSERWKTMSGKEKSKFDEM 60
           MAKGDPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSKKCSERWKTMSGKEKSKFDEM
Sbjct: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSKKCSERWKTMSGKEKSKFDEM 60

Query: 61  AKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAK 120
           AKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAK
Sbjct: 61  AKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAK 120

Query: 121 KLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKVEEEDE 180
           KLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKVEEEDE
Sbjct: 121 KLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKVEEEDE 180

Query: 181 DEEEMRRRMNKQSVYLSKKKK 201
           DEEEMRRRMNKQSVYLSKKKK
Sbjct: 181 DEEEMRRRMNKQSVYLSKKKK 201


>gi|169168166 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  415 bits (1067), Expect = e-116
 Identities = 201/201 (100%), Positives = 201/201 (100%)

Query: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSKKCSERWKTMSGKEKSKFDEM 60
           MAKGDPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSKKCSERWKTMSGKEKSKFDEM
Sbjct: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSKKCSERWKTMSGKEKSKFDEM 60

Query: 61  AKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAK 120
           AKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAK
Sbjct: 61  AKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAK 120

Query: 121 KLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKVEEEDE 180
           KLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKVEEEDE
Sbjct: 121 KLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKVEEEDE 180

Query: 181 DEEEMRRRMNKQSVYLSKKKK 201
           DEEEMRRRMNKQSVYLSKKKK
Sbjct: 181 DEEEMRRRMNKQSVYLSKKKK 201


>gi|113416897 PREDICTED: similar to high mobility group box 3
           isoform 1 [Homo sapiens]
          Length = 201

 Score =  415 bits (1067), Expect = e-116
 Identities = 201/201 (100%), Positives = 201/201 (100%)

Query: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSKKCSERWKTMSGKEKSKFDEM 60
           MAKGDPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSKKCSERWKTMSGKEKSKFDEM
Sbjct: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSKKCSERWKTMSGKEKSKFDEM 60

Query: 61  AKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAK 120
           AKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAK
Sbjct: 61  AKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAK 120

Query: 121 KLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKVEEEDE 180
           KLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKVEEEDE
Sbjct: 121 KLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKVEEEDE 180

Query: 181 DEEEMRRRMNKQSVYLSKKKK 201
           DEEEMRRRMNKQSVYLSKKKK
Sbjct: 181 DEEEMRRRMNKQSVYLSKKKK 201


>gi|239742753 PREDICTED: similar to high mobility group box 3
           isoform 2 [Homo sapiens]
          Length = 183

 Score =  339 bits (870), Expect = 8e-94
 Identities = 165/165 (100%), Positives = 165/165 (100%)

Query: 37  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFF 96
           EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFF
Sbjct: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFF 78

Query: 97  LFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSK 156
           LFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSK
Sbjct: 79  LFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSK 138

Query: 157 SKGKFDGSKRPAKVAWKKVEEEDEDEEEMRRRMNKQSVYLSKKKK 201
           SKGKFDGSKRPAKVAWKKVEEEDEDEEEMRRRMNKQSVYLSKKKK
Sbjct: 139 SKGKFDGSKRPAKVAWKKVEEEDEDEEEMRRRMNKQSVYLSKKKK 183



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 6/85 (7%)

Query: 3   KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61
           K DP  PK   S +  F    R + K  NP ++  + +KK  E W  ++  EK  +    
Sbjct: 64  KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKT 123

Query: 62  -----KTDKVHCDREMKGPAKGGKK 81
                K +K   D + KG   G K+
Sbjct: 124 AKLKEKYEKDVADSKSKGKFDGSKR 148


>gi|71143137 high-mobility group box 3 [Homo sapiens]
          Length = 200

 Score =  337 bits (865), Expect = 3e-93
 Identities = 170/189 (89%), Positives = 173/189 (91%), Gaps = 5/189 (2%)

Query: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57
           MAKGDPKKPKGKMSAY FFVQTCREE KKKNP   VNFAEFSKKCSERWKTMSGKEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60

Query: 58  DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115
           DEMAK DKV  DREMK  GPAKGGKKKKDP+APKRPPSGFFLF SE RPKIKSTNPGISI
Sbjct: 61  DEMAKADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 120

Query: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175
           GDVAKKLGEMWNNLNDSEKQPYITK AKLKEKYEKDVAD KSKGKFDG+K PAKVA KKV
Sbjct: 121 GDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKV 180

Query: 176 EEEDEDEEE 184
           EEEDE+EEE
Sbjct: 181 EEEDEEEEE 189


>gi|169212060 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  306 bits (785), Expect = 6e-84
 Identities = 157/188 (83%), Positives = 165/188 (87%), Gaps = 6/188 (3%)

Query: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57
           MAKGDPKKPKGKMSAY FFVQTCREE KKKNP   +NFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60

Query: 58  DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115
           +E+AK DKVH D+E+K  GPAKGGKKK DP+APKRPPSGFFLF SE  PK KSTNPGI I
Sbjct: 61  NELAKADKVHYDQEIKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPI 119

Query: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175
           GDVAKKLGEMW NLNDSEKQPYIT+ AKLKEKYEKDVA  KSKGK DG+K PAKVA KKV
Sbjct: 120 GDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKV 179

Query: 176 EEEDEDEE 183
           EEEDEDEE
Sbjct: 180 EEEDEDEE 187


>gi|239745831 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  306 bits (785), Expect = 6e-84
 Identities = 157/188 (83%), Positives = 165/188 (87%), Gaps = 6/188 (3%)

Query: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57
           MAKGDPKKPKGKMSAY FFVQTCREE KKKNP   +NFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60

Query: 58  DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115
           +E+AK DKVH D+E+K  GPAKGGKKK DP+APKRPPSGFFLF SE  PK KSTNPGI I
Sbjct: 61  NELAKADKVHYDQEIKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFCPKSKSTNPGIPI 119

Query: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175
           GDVAKKLGEMW NLNDSEKQPYIT+ AKLKEKYEKDVA  KSKGK DG+K PAKVA KKV
Sbjct: 120 GDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSDGAKGPAKVAQKKV 179

Query: 176 EEEDEDEE 183
           EEEDEDEE
Sbjct: 180 EEEDEDEE 187


>gi|169184027 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  303 bits (776), Expect = 6e-83
 Identities = 156/189 (82%), Positives = 164/189 (86%), Gaps = 6/189 (3%)

Query: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57
           MAKGDPKKP+GKMSAY F VQTC +E KKKNP   VNFAEFSKKCS RWKTMS KEK KF
Sbjct: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 58  DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115
            EMAK D+V  DREMK  GPAKGGKKK DP+APKRPPSGFFLF SE RPKIKSTNPGISI
Sbjct: 61  GEMAKADEVCYDREMKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 119

Query: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175
           GDVAKKLGEMWNNLNDSEKQPY+TK AKLKEKYEKDV D K KGKF G+KRPAKVA KKV
Sbjct: 120 GDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKV 179

Query: 176 EEEDEDEEE 184
           EEEDE++EE
Sbjct: 180 EEEDEEDEE 188


>gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  303 bits (776), Expect = 6e-83
 Identities = 156/189 (82%), Positives = 164/189 (86%), Gaps = 6/189 (3%)

Query: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57
           MAKGDPKKP+GKMSAY F VQTC +E KKKNP   VNFAEFSKKCS RWKTMS KEK KF
Sbjct: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 58  DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115
            EMAK D+V  DREMK  GPAKGGKKK DP+APKRPPSGFFLF SE RPKIKSTNPGISI
Sbjct: 61  GEMAKADEVCYDREMKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 119

Query: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175
           GDVAKKLGEMWNNLNDSEKQPY+TK AKLKEKYEKDV D K KGKF G+KRPAKVA KKV
Sbjct: 120 GDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKV 179

Query: 176 EEEDEDEEE 184
           EEEDE++EE
Sbjct: 180 EEEDEEDEE 188


>gi|113420668 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  303 bits (776), Expect = 6e-83
 Identities = 156/189 (82%), Positives = 164/189 (86%), Gaps = 6/189 (3%)

Query: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57
           MAKGDPKKP+GKMSAY F VQTC +E KKKNP   VNFAEFSKKCS RWKTMS KEK KF
Sbjct: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 58  DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115
            EMAK D+V  DREMK  GPAKGGKKK DP+APKRPPSGFFLF SE RPKIKSTNPGISI
Sbjct: 61  GEMAKADEVCYDREMKDYGPAKGGKKK-DPNAPKRPPSGFFLFCSEFRPKIKSTNPGISI 119

Query: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175
           GDVAKKLGEMWNNLNDSEKQPY+TK AKLKEKYEKDV D K KGKF G+KRPAKVA KKV
Sbjct: 120 GDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKFYGAKRPAKVARKKV 179

Query: 176 EEEDEDEEE 184
           EEEDE++EE
Sbjct: 180 EEEDEEDEE 188


>gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score =  287 bits (734), Expect = 5e-78
 Identities = 149/198 (75%), Positives = 162/198 (81%), Gaps = 7/198 (3%)

Query: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57
           MA+GD KKPKGKMSAY FF QTCREE KKKNP   VNF EFSKKCSE+ KTMSGKEK+KF
Sbjct: 1   MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 58  DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115
           DEMAK DKVH D+EMK  GP +GGKKK DP+A KRP SGFFLF SE  PKIKSTNPGISI
Sbjct: 61  DEMAKVDKVHYDQEMKDNGPVEGGKKK-DPNALKRPLSGFFLFCSEFHPKIKSTNPGISI 119

Query: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175
           GD+AKKLGEMW N +D EKQPYITK A LKEKYEKDVAD KSKGKFD +K P K+AWKKV
Sbjct: 120 GDMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKV 179

Query: 176 EEED-EDEEEMRRRMNKQ 192
           +E+D EDEEE      K+
Sbjct: 180 KEKDKEDEEEEEEEEEKK 197


>gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score =  287 bits (734), Expect = 5e-78
 Identities = 149/198 (75%), Positives = 162/198 (81%), Gaps = 7/198 (3%)

Query: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57
           MA+GD KKPKGKMSAY FF QTCREE KKKNP   VNF EFSKKCSE+ KTMSGKEK+KF
Sbjct: 1   MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 58  DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115
           DEMAK DKVH D+EMK  GP +GGKKK DP+A KRP SGFFLF SE  PKIKSTNPGISI
Sbjct: 61  DEMAKVDKVHYDQEMKDNGPVEGGKKK-DPNALKRPLSGFFLFCSEFHPKIKSTNPGISI 119

Query: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175
           GD+AKKLGEMW N +D EKQPYITK A LKEKYEKDVAD KSKGKFD +K P K+AWKKV
Sbjct: 120 GDMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKV 179

Query: 176 EEED-EDEEEMRRRMNKQ 192
           +E+D EDEEE      K+
Sbjct: 180 KEKDKEDEEEEEEEEEKK 197


>gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo
           sapiens]
          Length = 201

 Score =  287 bits (734), Expect = 5e-78
 Identities = 149/198 (75%), Positives = 162/198 (81%), Gaps = 7/198 (3%)

Query: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57
           MA+GD KKPKGKMSAY FF QTCREE KKKNP   VNF EFSKKCSE+ KTMSGKEK+KF
Sbjct: 1   MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 58  DEMAKTDKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115
           DEMAK DKVH D+EMK  GP +GGKKK DP+A KRP SGFFLF SE  PKIKSTNPGISI
Sbjct: 61  DEMAKVDKVHYDQEMKDNGPVEGGKKK-DPNALKRPLSGFFLFCSEFHPKIKSTNPGISI 119

Query: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKV 175
           GD+AKKLGEMW N +D EKQPYITK A LKEKYEKDVAD KSKGKFD +K P K+AWKKV
Sbjct: 120 GDMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSAKGPTKIAWKKV 179

Query: 176 EEED-EDEEEMRRRMNKQ 192
           +E+D EDEEE      K+
Sbjct: 180 KEKDKEDEEEEEEEEEKK 197


>gi|194688135 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  252 bits (643), Expect = 2e-67
 Identities = 130/192 (67%), Positives = 148/192 (77%), Gaps = 8/192 (4%)

Query: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57
           M KGDP KP+GKMS+Y FFVQTCREE KKK+P   VNFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 58  DEMAKTDKVHCDREMKG--PAKGGKK--KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGI 113
           ++MAK+DK   DREMK   P KG KK  KKDP+APKRPPS FFLF SE RPKIKS +PG+
Sbjct: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120

Query: 114 SIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFD-GSKRPAKVAW 172
           SIGD AKKLGEMW+  +  +KQPY  K AKLKEKYEKD+A  ++KGK + G K P +   
Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180

Query: 173 KKVEEEDEDEEE 184
            K + E EDEEE
Sbjct: 181 SKKKNEPEDEEE 192


>gi|194688133 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  252 bits (643), Expect = 2e-67
 Identities = 130/192 (67%), Positives = 148/192 (77%), Gaps = 8/192 (4%)

Query: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57
           M KGDP KP+GKMS+Y FFVQTCREE KKK+P   VNFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 58  DEMAKTDKVHCDREMKG--PAKGGKK--KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGI 113
           ++MAK+DK   DREMK   P KG KK  KKDP+APKRPPS FFLF SE RPKIKS +PG+
Sbjct: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120

Query: 114 SIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFD-GSKRPAKVAW 172
           SIGD AKKLGEMW+  +  +KQPY  K AKLKEKYEKD+A  ++KGK + G K P +   
Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180

Query: 173 KKVEEEDEDEEE 184
            K + E EDEEE
Sbjct: 181 SKKKNEPEDEEE 192


>gi|11321591 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  252 bits (643), Expect = 2e-67
 Identities = 130/192 (67%), Positives = 148/192 (77%), Gaps = 8/192 (4%)

Query: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57
           M KGDP KP+GKMS+Y FFVQTCREE KKK+P   VNFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 58  DEMAKTDKVHCDREMKG--PAKGGKK--KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGI 113
           ++MAK+DK   DREMK   P KG KK  KKDP+APKRPPS FFLF SE RPKIKS +PG+
Sbjct: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120

Query: 114 SIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFD-GSKRPAKVAW 172
           SIGD AKKLGEMW+  +  +KQPY  K AKLKEKYEKD+A  ++KGK + G K P +   
Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180

Query: 173 KKVEEEDEDEEE 184
            K + E EDEEE
Sbjct: 181 SKKKNEPEDEEE 192


>gi|4504425 high-mobility group box 1 [Homo sapiens]
          Length = 215

 Score =  251 bits (642), Expect = 2e-67
 Identities = 131/195 (67%), Positives = 149/195 (76%), Gaps = 11/195 (5%)

Query: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57
           M KGDPKKP+GKMS+Y FFVQTCREE KKK+P   VNF+EFSKKCSERWKTMS KEK KF
Sbjct: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60

Query: 58  DEMAKTDKVHCDREMKG--PAKGGKKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGI 113
           ++MAK DK   +REMK   P KG  KKK  DP+APKRPPS FFLF SE RPKIK  +PG+
Sbjct: 61  EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 120

Query: 114 SIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSK----RPAK 169
           SIGDVAKKLGEMWNN    +KQPY  K AKLKEKYEKD+A  ++KGK D +K    +  K
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK 180

Query: 170 VAWKKVEEEDEDEEE 184
              KK EEEDE++EE
Sbjct: 181 SKKKKEEEEDEEDEE 195


>gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
          Length = 211

 Score =  241 bits (614), Expect = 4e-64
 Identities = 126/195 (64%), Positives = 146/195 (74%), Gaps = 11/195 (5%)

Query: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57
           M KGDPKKP+GKMS+Y FFVQTCREE KKK+    VNF+EFS KCSERWKTMS KEK KF
Sbjct: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60

Query: 58  DEMAKTDKVHCDREMKG--PAKGGKKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGI 113
           ++MAK DK H +R+MK   P KG  KKK  DP+APKRPPS FFLF SE  PKIK  +PG+
Sbjct: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120

Query: 114 SIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSK----RPAK 169
           SIGDVAKKLGEMWNN    +KQP   K AKLKEKYEKD+A  ++KGK + +K    +  K
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180

Query: 170 VAWKKVEEEDEDEEE 184
              KK EEEDE++EE
Sbjct: 181 SKKKKEEEEDEEDEE 195


>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 488

 Score =  187 bits (474), Expect = 7e-48
 Identities = 102/172 (59%), Positives = 119/172 (69%), Gaps = 15/172 (8%)

Query: 28  KKKNPVNFAEFSKKCSERWKTMSGKEKSKF-------DEMAKTDKVHCDREMKG--PAKG 78
           K +  VNF+EFSKKCSERWK MS KEK KF       ++MAK DK H  REMK   P KG
Sbjct: 160 KVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKG 219

Query: 79  GKKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQP 136
             KKK  DP+APKRPPS FFL+ SE  PKIK   PG+S GDVAKKLGEMWNN    +KQP
Sbjct: 220 ETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQP 279

Query: 137 YITKTAKLKEKYEKDVADSKSKGKFD----GSKRPAKVAWKKVEEEDEDEEE 184
           Y  ++AKLKEKYEKD+A  ++KGK D    G  + AK   KK EEE+E++EE
Sbjct: 280 YEKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEE 331



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/77 (23%), Positives = 29/77 (37%)

Query: 84  DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAK 143
           D   P RP        S I          ++  + +KK  E W N++  EK  +     K
Sbjct: 136 DHLIPVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGK 195

Query: 144 LKEKYEKDVADSKSKGK 160
            ++  + D A  K + K
Sbjct: 196 FEDMAKADKAHYKREMK 212


>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 487

 Score =  187 bits (474), Expect = 7e-48
 Identities = 102/172 (59%), Positives = 119/172 (69%), Gaps = 15/172 (8%)

Query: 28  KKKNPVNFAEFSKKCSERWKTMSGKEKSKF-------DEMAKTDKVHCDREMKG--PAKG 78
           K +  VNF+EFSKKCSERWK MS KEK KF       ++MAK DK H  REMK   P KG
Sbjct: 160 KVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKG 219

Query: 79  GKKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQP 136
             KKK  DP+APKRPPS FFL+ SE  PKIK   PG+S GDVAKKLGEMWNN    +KQP
Sbjct: 220 ETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQP 279

Query: 137 YITKTAKLKEKYEKDVADSKSKGKFD----GSKRPAKVAWKKVEEEDEDEEE 184
           Y  ++AKLKEKYEKD+A  ++KGK D    G  + AK   KK EEE+E++EE
Sbjct: 280 YEKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEE 331



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/77 (23%), Positives = 29/77 (37%)

Query: 84  DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAK 143
           D   P RP        S I          ++  + +KK  E W N++  EK  +     K
Sbjct: 136 DHLIPVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGK 195

Query: 144 LKEKYEKDVADSKSKGK 160
            ++  + D A  K + K
Sbjct: 196 FEDMAKADKAHYKREMK 212


>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 486

 Score =  187 bits (474), Expect = 7e-48
 Identities = 102/172 (59%), Positives = 119/172 (69%), Gaps = 15/172 (8%)

Query: 28  KKKNPVNFAEFSKKCSERWKTMSGKEKSKF-------DEMAKTDKVHCDREMKG--PAKG 78
           K +  VNF+EFSKKCSERWK MS KEK KF       ++MAK DK H  REMK   P KG
Sbjct: 160 KVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKG 219

Query: 79  GKKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQP 136
             KKK  DP+APKRPPS FFL+ SE  PKIK   PG+S GDVAKKLGEMWNN    +KQP
Sbjct: 220 ETKKKFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQP 279

Query: 137 YITKTAKLKEKYEKDVADSKSKGKFD----GSKRPAKVAWKKVEEEDEDEEE 184
           Y  ++AKLKEKYEKD+A  ++KGK D    G  + AK   KK EEE+E++EE
Sbjct: 280 YEKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEE 331



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/77 (23%), Positives = 29/77 (37%)

Query: 84  DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAK 143
           D   P RP        S I          ++  + +KK  E W N++  EK  +     K
Sbjct: 136 DHLIPVRPGKSHCSTLSSIETAPGKVRVSVNFSEFSKKCSERWKNMSAKEKGKFGRARGK 195

Query: 144 LKEKYEKDVADSKSKGK 160
            ++  + D A  K + K
Sbjct: 196 FEDMAKADKAHYKREMK 212


>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
          Length = 879

 Score =  185 bits (470), Expect = 2e-47
 Identities = 101/177 (57%), Positives = 124/177 (70%), Gaps = 9/177 (5%)

Query: 25  EECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKG--PAKGG 79
           EE KKKNP   V F+EF KKCSE WKT+  KEK KF++MAK DK H +REMK   P KG 
Sbjct: 699 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 758

Query: 80  KKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPY 137
           KKKK  DP+APKRPP  FFLF SE RPKIK  +PG+SI DV KKL  MWNN   ++KQ Y
Sbjct: 759 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 818

Query: 138 ITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVA--WKKVEEEDEDEEEMRRRMNKQ 192
             K AKLKEKY+KD+A  ++KGK + +K+    A   KK +EE+EDEE+ +   N++
Sbjct: 819 EKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKEEEEDEEDEQEEENEE 875


>gi|57232750 HMG2 like isoform 1 [Homo sapiens]
          Length = 186

 Score =  122 bits (307), Expect = 2e-28
 Identities = 64/157 (40%), Positives = 92/157 (58%), Gaps = 5/157 (3%)

Query: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57
           M K    KPK  +S+YV F+   R + K++ P   V F EFS+KCSE+W+++S  EK+K+
Sbjct: 1   MGKEIQLKPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKY 60

Query: 58  DEMAKTDKVHCDREMKGPAKGGKK--KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISI 115
           + +AK DK     EM       KK  K+DP  P+RPPS F LF  +   ++K  NP  S+
Sbjct: 61  EALAKLDKARYQEEMMNYVGKRKKRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSV 120

Query: 116 GDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDV 152
             VAK  G+MW+   D EK PY  + A L+ KY +++
Sbjct: 121 VQVAKATGKMWSTATDLEKHPYEQRVALLRAKYFEEL 157



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 88  PKRPPSGFFLFSSEIRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYITKTAKLK 145
           PK   S +  F    R K K   P   +G  + ++K  E W +++  EK  Y       K
Sbjct: 9   PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68

Query: 146 EKYEKDVADSKSKGK 160
            +Y++++ +   K K
Sbjct: 69  ARYQEEMMNYVGKRK 83


>gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  119 bits (299), Expect = 1e-27
 Identities = 67/128 (52%), Positives = 84/128 (65%), Gaps = 5/128 (3%)

Query: 59  EMAKTDKVHCDREMKG--PAKGGKKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGIS 114
           +  K D  H +REMK   P K   K K  DP+APK PP  FF+FSSE  PKIK  +PG+S
Sbjct: 31  QRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLS 89

Query: 115 IGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKK 174
           I DVAKKLGEMWN + + +K PY  K  KLKEKYEKD+A    KGK D +K+ A  A K 
Sbjct: 90  ISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKC 149

Query: 175 VEEEDEDE 182
            ++++ED+
Sbjct: 150 KKKKEEDK 157



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 2/80 (2%)

Query: 5   DPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKTD 64
           DP  PK    A+  F      + K+   ++ ++ +KK  E W  ++  +K  +++ A   
Sbjct: 60  DPNAPKSPPLAFFMFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKL 119

Query: 65  KVHCDREMKGPAKGGKKKKD 84
           K   ++++   A GGK K D
Sbjct: 120 KEKYEKDI--AAFGGKGKPD 137


>gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  119 bits (299), Expect = 1e-27
 Identities = 67/128 (52%), Positives = 84/128 (65%), Gaps = 5/128 (3%)

Query: 59  EMAKTDKVHCDREMKG--PAKGGKKKK--DPSAPKRPPSGFFLFSSEIRPKIKSTNPGIS 114
           +  K D  H +REMK   P K   K K  DP+APK PP  FF+FSSE  PKIK  +PG+S
Sbjct: 31  QRVKVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HPGLS 89

Query: 115 IGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKK 174
           I DVAKKLGEMWN + + +K PY  K  KLKEKYEKD+A    KGK D +K+ A  A K 
Sbjct: 90  ISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKC 149

Query: 175 VEEEDEDE 182
            ++++ED+
Sbjct: 150 KKKKEEDK 157



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 2/80 (2%)

Query: 5   DPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKTD 64
           DP  PK    A+  F      + K+   ++ ++ +KK  E W  ++  +K  +++ A   
Sbjct: 60  DPNAPKSPPLAFFMFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKL 119

Query: 65  KVHCDREMKGPAKGGKKKKD 84
           K   ++++   A GGK K D
Sbjct: 120 KEKYEKDI--AAFGGKGKPD 137


>gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 227

 Score =  111 bits (278), Expect = 4e-25
 Identities = 62/131 (47%), Positives = 82/131 (62%), Gaps = 3/131 (2%)

Query: 52  KEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNP 111
           K+KS    +  T +       +   K   K +DP+APK PP  FF+FSSE  PKIK  +P
Sbjct: 57  KKKSSTQMLQSTSQSFLRSAQRAETK--MKFEDPNAPKSPPLAFFMFSSEDCPKIKE-HP 113

Query: 112 GISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVA 171
           G+SI DVAKKLGEMWN + + +K PY  K  KLKEKYEKD+A    KGK D +K+ A  A
Sbjct: 114 GLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKA 173

Query: 172 WKKVEEEDEDE 182
            K  ++++ED+
Sbjct: 174 EKCKKKKEEDK 184



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 2/80 (2%)

Query: 5   DPKKPKGKMSAYVFFVQTCREECKKKNPVNFAEFSKKCSERWKTMSGKEKSKFDEMAKTD 64
           DP  PK    A+  F      + K+   ++ ++ +KK  E W  ++  +K  +++ A   
Sbjct: 87  DPNAPKSPPLAFFMFSSEDCPKIKEHPGLSISDVAKKLGEMWNYIAEDDKHPYEKKAVKL 146

Query: 65  KVHCDREMKGPAKGGKKKKD 84
           K   ++++   A GGK K D
Sbjct: 147 KEKYEKDI--AAFGGKGKPD 164


>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
          Length = 709

 Score = 82.0 bits (201), Expect = 3e-16
 Identities = 49/144 (34%), Positives = 81/144 (56%), Gaps = 2/144 (1%)

Query: 50  SGKEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKST 109
           S +++ K  ++ K  K+  DR+ +      KK KDP+APKRP S + L+ +  R KIKS 
Sbjct: 510 SDRDEKKRKQLKKA-KMAKDRKSRKKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSD 568

Query: 110 NPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAK 169
           +PGISI D++KK GE+W  ++  +K+ +  K    +  YEK + + +  G+ + SKR   
Sbjct: 569 HPGISITDLSKKAGEIWKGMSKEKKEEWDRKAEDARRDYEKAMKEYEG-GRGESSKRDKS 627

Query: 170 VAWKKVEEEDEDEEEMRRRMNKQS 193
              KKV+ + E +    R  + +S
Sbjct: 628 KKKKKVKVKMEKKSTPSRGSSSKS 651



 Score = 55.8 bits (133), Expect = 2e-08
 Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 38/185 (20%)

Query: 5   DPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMAKT 63
           DP  PK  MSAY+ ++   RE+ K  +P ++  + SKK  E WK MS ++K ++D  A+ 
Sbjct: 543 DPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKAED 602

Query: 64  DKVHCDREMK--GPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKST-NPGISIGDVAK 120
            +   ++ MK     +G   K+D S  K+          +++ + KST + G S    ++
Sbjct: 603 ARRDYEKAMKEYEGGRGESSKRDKSKKKK--------KVKVKMEKKSTPSRGSSSKSSSR 654

Query: 121 KLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFDGSKRPAKVAWKKVEEEDE 180
           +L E +             K+ +     E    ++KSK              K+   ED 
Sbjct: 655 QLSESF-------------KSKEFVSSDESSSGENKSKK-------------KRRRSEDS 688

Query: 181 DEEEM 185
           +EEE+
Sbjct: 689 EEEEL 693


>gi|7662274 epidermal Langerhans cell protein LCP1 [Homo sapiens]
          Length = 621

 Score = 70.9 bits (172), Expect = 7e-13
 Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 2/95 (2%)

Query: 62  KTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKK 121
           KT  V   ++ K P K  +KKKDP+ P++P S + LF  + +  IK  NP  + G+V+K 
Sbjct: 199 KTVVVEAGKKQKAPKK--RKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKI 256

Query: 122 LGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSK 156
           +  MW++L + +KQ Y  KT   K++Y K +A  K
Sbjct: 257 VASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYK 291



 Score = 36.6 bits (83), Expect = 0.015
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 8/99 (8%)

Query: 3   KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKF---D 58
           K DP +P+  +SAY  F +  +   K +NP   F E SK  +  W ++  ++K  +    
Sbjct: 217 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKT 276

Query: 59  EMAKTDKVHCDREMKG----PAKGGKKKKDPSAPKRPPS 93
           E AK + +      K      A     + DP+ P + PS
Sbjct: 277 EAAKKEYLKALAAYKDNQECQATVETVELDPAPPSQTPS 315


>gi|7662322 thymus high mobility group box protein TOX [Homo
           sapiens]
          Length = 526

 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 2/103 (1%)

Query: 51  GKEKSKFDEMAKTDKVHCDREMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTN 110
           G + SK +   K       ++ K P K  KKKKDP+ P++P S + LF  + +  IK  N
Sbjct: 226 GDDTSKINGGEKRPASDMGKKPKTPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQN 283

Query: 111 PGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVA 153
           P  + G+V+K +  MW+ L + +KQ Y  KT   K++Y K +A
Sbjct: 284 PNATFGEVSKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLA 326



 Score = 35.4 bits (80), Expect = 0.033
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 3   KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61
           K DP +P+  +SAY  F +  +   K +NP   F E SK  +  W  +  ++K  + +  
Sbjct: 255 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDGLGEEQKQVYKKKT 314

Query: 62  KTDK 65
           +  K
Sbjct: 315 EAAK 318


>gi|149408144 TOX high mobility group box family member 2 isoform a
           [Homo sapiens]
          Length = 506

 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 2/84 (2%)

Query: 70  REMKGPAKGGKKKKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNL 129
           ++ K P K  KKKKDP+ P++P S + LF  + +  IK  NP  + GDV+K +  MW++L
Sbjct: 230 KKAKNPKK--KKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSL 287

Query: 130 NDSEKQPYITKTAKLKEKYEKDVA 153
            + +KQ Y  KT   K++Y K +A
Sbjct: 288 GEEQKQAYKRKTEAAKKEYLKALA 311



 Score = 35.4 bits (80), Expect = 0.033
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 3   KGDPKKPKGKMSAYVFFVQTCREECKKKNP-VNFAEFSKKCSERWKTMSGKEKSKFDEMA 61
           K DP +P+  +SAY  F +  +   K +NP   F + SK  +  W ++  ++K  +    
Sbjct: 240 KKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKT 299

Query: 62  KTDK 65
           +  K
Sbjct: 300 EAAK 303


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.127    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,907,329
Number of Sequences: 37866
Number of extensions: 430640
Number of successful extensions: 3439
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 146
Number of HSP's that attempted gapping in prelim test: 2749
Number of HSP's gapped (non-prelim): 603
length of query: 201
length of database: 18,247,518
effective HSP length: 97
effective length of query: 104
effective length of database: 14,574,516
effective search space: 1515749664
effective search space used: 1515749664
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.