Search of human proteins with 193082988

Search of human proteins with 193082988

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|193082988 GTP binding protein 3 (mitochondrial) isoform IV
[Homo sapiens]
         (524 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|193082988 GTP binding protein 3 (mitochondrial) isoform IV [H...  1046   0.0  
gi|193082991 GTP binding protein 3 (mitochondrial) isoform V [Ho...   959   0.0  
gi|193082993 GTP binding protein 3 (mitochondrial) isoform III [...   910   0.0  
gi|24307899 Era-like 1 [Homo sapiens]                                  45   2e-04
gi|24308117 GTP binding protein 5 [Homo sapiens]                       40   0.004
gi|9506611 guanine nucleotide binding protein-like 3 (nucleolar)...    39   0.009
gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens]    39   0.012
gi|93277113 GTP_binding protein [Homo sapiens]                         36   0.075
gi|193794819 sialic acid binding Ig-like lectin 6 isoform 2 prec...    35   0.13 
gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)...    35   0.17 
gi|38788319 guanine nucleotide binding protein-like 1 [Homo sapi...    35   0.17 
gi|45643129 guanine nucleotide binding protein-like 3 isoform 2 ...    35   0.22 
gi|45643127 guanine nucleotide binding protein-like 3 isoform 2 ...    35   0.22 
gi|45593130 guanine nucleotide binding protein-like 3 isoform 1 ...    35   0.22 
gi|226437579 NAC alpha domain containing [Homo sapiens]                33   0.64 
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]     33   0.64 
gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]     33   0.64 
gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]     33   0.64 
gi|14150100 nucleoside-triphosphatase C1orf57 [Homo sapiens]           33   0.64 
gi|52630419 sterol regulatory element binding transcription fact...    33   0.83 
gi|22547195 sterol regulatory element binding transcription fact...    33   0.83 
gi|14150078 hypothetical protein LOC84273 [Homo sapiens]               33   0.83 
gi|33469968 minichromosome maintenance complex component 7 isofo...    32   1.1  
gi|33469922 minichromosome maintenance complex component 7 isofo...    32   1.1  
gi|7262393 ATP-binding cassette, sub-family D (ALD), member 1 [H...    32   1.1  
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]     32   1.1  
gi|9945308 ATP-binding cassette, sub-family D, member 2 [Homo sa...    32   1.1  
gi|40805843 K(lysine) acetyltransferase 2B [Homo sapiens]              32   1.4  
gi|21536378 ATP-binding cassette, sub-family B (MDR/TAP), member...    32   1.4  
gi|55953087 G protein-binding protein CRFG [Homo sapiens]              32   1.4  

>gi|193082988 GTP binding protein 3 (mitochondrial) isoform IV [Homo
           sapiens]
          Length = 524

 Score = 1046 bits (2706), Expect = 0.0
 Identities = 524/524 (100%), Positives = 524/524 (100%)

Query: 1   MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGH 60
           MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGH
Sbjct: 1   MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGH 60

Query: 61  ALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPA 120
           ALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPA
Sbjct: 61  ALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPA 120

Query: 121 VVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQL 180
           VVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQL
Sbjct: 121 VVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQL 180

Query: 181 DGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQGGSTWWWGRKTPHISPQRL 240
           DGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQGGSTWWWGRKTPHISPQRL
Sbjct: 181 DGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQGGSTWWWGRKTPHISPQRL 240

Query: 241 PSLSLSACLLSPTADIEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNL 300
           PSLSLSACLLSPTADIEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNL
Sbjct: 241 PSLSLSACLLSPTADIEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNL 300

Query: 301 LSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVEQEGVRRARERLEQ 360
           LSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVEQEGVRRARERLEQ
Sbjct: 301 LSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVEQEGVRRARERLEQ 360

Query: 361 ADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPGPGP 420
           ADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPGPGP
Sbjct: 361 ADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPGPGP 420

Query: 421 DLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPLLTRARHQHHLQGCLDALGHY 480
           DLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPLLTRARHQHHLQGCLDALGHY
Sbjct: 421 DLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPLLTRARHQHHLQGCLDALGHY 480

Query: 481 KQSKDLALAAEALRVARGHLTRLTGGGGTEEILDIIFQDFCVGK 524
           KQSKDLALAAEALRVARGHLTRLTGGGGTEEILDIIFQDFCVGK
Sbjct: 481 KQSKDLALAAEALRVARGHLTRLTGGGGTEEILDIIFQDFCVGK 524


>gi|193082991 GTP binding protein 3 (mitochondrial) isoform V [Homo
           sapiens]
          Length = 492

 Score =  959 bits (2480), Expect = 0.0
 Identities = 492/524 (93%), Positives = 492/524 (93%), Gaps = 32/524 (6%)

Query: 1   MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGH 60
           MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGH
Sbjct: 1   MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGH 60

Query: 61  ALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPA 120
           ALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPA
Sbjct: 61  ALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPA 120

Query: 121 VVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQL 180
           VVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQL
Sbjct: 121 VVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQL 180

Query: 181 DGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQGGSTWWWGRKTPHISPQRL 240
           DGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQ                   
Sbjct: 181 DGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQ------------------- 221

Query: 241 PSLSLSACLLSPTADIEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNL 300
                        ADIEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNL
Sbjct: 222 -------------ADIEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNL 268

Query: 301 LSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVEQEGVRRARERLEQ 360
           LSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVEQEGVRRARERLEQ
Sbjct: 269 LSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVEQEGVRRARERLEQ 328

Query: 361 ADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPGPGP 420
           ADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPGPGP
Sbjct: 329 ADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPGPGP 388

Query: 421 DLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPLLTRARHQHHLQGCLDALGHY 480
           DLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPLLTRARHQHHLQGCLDALGHY
Sbjct: 389 DLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPLLTRARHQHHLQGCLDALGHY 448

Query: 481 KQSKDLALAAEALRVARGHLTRLTGGGGTEEILDIIFQDFCVGK 524
           KQSKDLALAAEALRVARGHLTRLTGGGGTEEILDIIFQDFCVGK
Sbjct: 449 KQSKDLALAAEALRVARGHLTRLTGGGGTEEILDIIFQDFCVGK 492


>gi|193082993 GTP binding protein 3 (mitochondrial) isoform III
           [Homo sapiens]
          Length = 471

 Score =  910 bits (2351), Expect = 0.0
 Identities = 471/524 (89%), Positives = 471/524 (89%), Gaps = 53/524 (10%)

Query: 1   MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGH 60
           MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGH
Sbjct: 1   MWRGLWTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGH 60

Query: 61  ALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPA 120
           ALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPA
Sbjct: 61  ALRILTAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPA 120

Query: 121 VVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQL 180
           VVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQL
Sbjct: 121 VVSGVLQALGSVPGLRPAEAGEFTRRAFANGKLNLTEVEGLADLIHAETEAQRRQALRQL 180

Query: 181 DGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQGGSTWWWGRKTPHISPQRL 240
           DGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQ                   
Sbjct: 181 DGELGHLCRGWAETLTKALAHVEAYIDFGEDDNLEEGVLEQ------------------- 221

Query: 241 PSLSLSACLLSPTADIEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNL 300
                        ADIEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNL
Sbjct: 222 -------------ADIEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNL 268

Query: 301 LSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVEQEGVRRARERLEQ 360
           LSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVEQEGVRRARE    
Sbjct: 269 LSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVEQEGVRRARE---- 324

Query: 361 ADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPGPGP 420
                            SCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPGPGP
Sbjct: 325 -----------------SCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPGPGP 367

Query: 421 DLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPLLTRARHQHHLQGCLDALGHY 480
           DLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPLLTRARHQHHLQGCLDALGHY
Sbjct: 368 DLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDPPLLTRARHQHHLQGCLDALGHY 427

Query: 481 KQSKDLALAAEALRVARGHLTRLTGGGGTEEILDIIFQDFCVGK 524
           KQSKDLALAAEALRVARGHLTRLTGGGGTEEILDIIFQDFCVGK
Sbjct: 428 KQSKDLALAAEALRVARGHLTRLTGGGGTEEILDIIFQDFCVGK 471


>gi|24307899 Era-like 1 [Homo sapiens]
          Length = 437

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 16/175 (9%)

Query: 241 PSLSLSACLLSPTADIEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNL 300
           P  S++ C+ + + +   R  Q  L  H  D     R+   + VV+ G PNAGKS+L N 
Sbjct: 79  PDSSVTPCVPAVSMN---RDEQDVLLVHHPDMPENSRV---LRVVLLGAPNAGKSTLSNQ 132

Query: 301 LSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGL----REGVGPVEQEGVRRARE 356
           L  + V  VS +  TTR      +      V+L DT G+    ++    +E   +    +
Sbjct: 133 LLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDTPGIISPGKQKRHHLELSLLEDPWK 192

Query: 357 RLEQADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLL 411
            +E ADL++ ++D SD  + +  +       +  +Q PS      +LV+NK D L
Sbjct: 193 SMESADLVVVLVDVSDKWTRNQLSPQLLRCLTKYSQIPS------VLVMNKVDCL 241


>gi|24308117 GTP binding protein 5 [Homo sapiens]
          Length = 406

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 47/179 (26%), Positives = 71/179 (39%), Gaps = 25/179 (13%)

Query: 278 LRSGVHVVVTGPPNAGKSSLVNLLSRK-------PVSIVSPEPGTTRDVLETPVDLAGFP 330
           L++  H  + G PNAGKSSL+  +S         P + + P  G         + +A  P
Sbjct: 221 LKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIP 280

Query: 331 VLLSDTAGLREGVGPVEQEGVRRARERLEQADLILAMLDASDLASPSSCNFLATVVASVG 390
            ++   A    G+G      + R R           +L   DL+ P     +  +   + 
Sbjct: 281 GIIRG-AHQNRGLGSAFLRHIERCR----------FLLFVVDLSQPEPWTQVDDLKYELE 329

Query: 391 AQSPSDSSQRLLLVLNKSDLLSPEGPGPGPDLPPHL-----LLSCLTGEGLDGLLEALR 444
                 S++   +V NK DL  PE       L  HL     +LS LTGE L+ LL  L+
Sbjct: 330 MYEKGLSARPHAIVANKIDL--PEAQANLSQLRDHLGQEVIVLSALTGENLEQLLLHLK 386


>gi|9506611 guanine nucleotide binding protein-like 3
           (nucleolar)-like [Homo sapiens]
          Length = 582

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 240 LPSLSLSACLLSPTADIEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVN 299
           +P    S  LL   A      L   LG + R       +R+ + V V G PN GKSSL+N
Sbjct: 215 VPVDQASESLLKSKACFGAENLMRVLGNYCRLGE----VRTHIRVGVVGLPNVGKSSLIN 270

Query: 300 LLSRKPVSIVSPEPGTTRDVLETPVD 325
            L R     V   PG T+ + E  +D
Sbjct: 271 SLKRSRACSVGAVPGITKFMQEVYLD 296



 Score = 34.3 bits (77), Expect = 0.29
 Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 12/74 (16%)

Query: 346 VEQEGVRRA-----RERLEQADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSSQR 400
           ++ E  R+A     R+ +E +D+IL +LDA D   P  C       A + AQ     +++
Sbjct: 115 LDDEATRKAYYKEFRKVVEYSDVILEVLDARD---PLGCRCFQMEEAVLRAQG----NKK 167

Query: 401 LLLVLNKSDLLSPE 414
           L+LVLNK DL+  E
Sbjct: 168 LVLVLNKIDLVPKE 181


>gi|76881819 sterile alpha motif domain containing 11 [Homo sapiens]
          Length = 681

 Score = 38.9 bits (89), Expect = 0.012
 Identities = 58/204 (28%), Positives = 80/204 (39%), Gaps = 20/204 (9%)

Query: 234 HISPQRLPSLSLSACLLSPTADIEVRALQVALG--AHLRDARRGQRLRSGVHVVVTGPPN 291
           H  P  LPS  L    L    ++   AL+   G  AHL  +  GQR + G+     G   
Sbjct: 226 HDPPHHLPSHDL----LRVRQEVAAAALRGPSGLEAHLPSSTAGQRRKQGLAQHREGAAP 281

Query: 292 AGKSSLVNLLSRKPVSIVSPE--PGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVEQE 349
           A   S       +P  ++SP+  P         P  L G P  L  T G    + P + E
Sbjct: 282 AAAPSFSERELPQPPPLLSPQNAPHVALGPHLRPPFL-GVPSALCQTPGY-GFLPPAQAE 339

Query: 350 GVRRARERLEQADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSSQRL-----LLV 404
              R +E L + +L    L A  L      +    ++A   A  P+D ++ L     LLV
Sbjct: 340 MFARQQELLRKQNLARLELPADLLRQKELESARPQLLAPETALRPNDGAEELQRRGALLV 399

Query: 405 LNKSD----LLSPEG-PGPGPDLP 423
           LN        L P+G PG GP  P
Sbjct: 400 LNHGAAPLLALPPQGPPGSGPPTP 423



 Score = 29.6 bits (65), Expect = 7.0
 Identities = 32/82 (39%), Positives = 38/82 (46%), Gaps = 13/82 (15%)

Query: 114 HVHGGPAV---VSGVLQALGSVPG---LRPAEAGEFTRRAFANGKLNLTEVEGLADLI-H 166
           HV  GP +     GV  AL   PG   L PA+A  F R+     K NL  +E  ADL+  
Sbjct: 306 HVALGPHLRPPFLGVPSALCQTPGYGFLPPAQAEMFARQQELLRKQNLARLELPADLLRQ 365

Query: 167 AETEAQRRQ------ALRQLDG 182
            E E+ R Q      ALR  DG
Sbjct: 366 KELESARPQLLAPETALRPNDG 387


>gi|93277113 GTP_binding protein [Homo sapiens]
          Length = 334

 Score = 36.2 bits (82), Expect = 0.075
 Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 7/62 (11%)

Query: 284 VVVTGPPNAGKSSLVNLLSRK-----PVSIVSPEPGTTRDVLETPVDLAGFPVL-LSDTA 337
           ++V G PN GKSSL+N L R+       + V  EPG TR V+ + + ++  P++ L DT 
Sbjct: 146 IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVM-SKIQVSERPLMFLLDTP 204

Query: 338 GL 339
           G+
Sbjct: 205 GV 206


>gi|193794819 sialic acid binding Ig-like lectin 6 isoform 2
           precursor [Homo sapiens]
          Length = 437

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 38/142 (26%), Positives = 58/142 (40%), Gaps = 18/142 (12%)

Query: 6   WTLAAQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGHALRIL 65
           W  AA  + GPR   +   +  P P   +T           G+ + RT    +  + +IL
Sbjct: 182 WMSAAPTSLGPRTTQSSVLTITPRPQDHSTNLTCQVTFPGAGVTMERTI-QLNVSSFKIL 240

Query: 66  TAPRDLPLARHASLRLLSDPRSGEPLDRALVLWFPGPQSFTGEDCVEFHVHGGPAVVSGV 125
                LP+    +LRLL D     P   A + WF G  +          ++  P   +GV
Sbjct: 241 QNTSSLPVLEGQALRLLCDADGNPP---AHLSWFQGFPA----------LNATPISNTGV 287

Query: 126 LQALGSVPGLRPAEAGEFTRRA 147
           L+    +P +  AE G+FT RA
Sbjct: 288 LE----LPQVGSAEEGDFTCRA 305


>gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)
           [Homo sapiens]
          Length = 731

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 13/94 (13%)

Query: 227 WWGRKTPHISPQRLPSLSLSACLLSPTADIEVRALQVALGAHLRDARRGQRLRSG---VH 283
           W  ++   +  Q  P+L+  A L +P             GA ++  R+  +L +    + 
Sbjct: 263 WATKRWVAVLSQDYPTLAFHASLTNPFGK----------GAFIQLLRQFGKLHTDKKQIS 312

Query: 284 VVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTR 317
           V   G PN GKSS++N L  K V  V+P  G T+
Sbjct: 313 VGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETK 346


>gi|38788319 guanine nucleotide binding protein-like 1 [Homo
           sapiens]
          Length = 607

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 10/83 (12%)

Query: 276 QRLRSGVHVV-VTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTR---DVLETP----VDLA 327
           +R + GV  +   G PN GKSSL+N L  + V  VS  PG TR       TP     D  
Sbjct: 354 ERYKDGVVTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCP 413

Query: 328 G--FPVLLSDTAGLREGVGPVEQ 348
           G  FP LL     +  G+ P+ Q
Sbjct: 414 GLIFPSLLPRQLQVLAGIYPIAQ 436


>gi|45643129 guanine nucleotide binding protein-like 3 isoform 2
           [Homo sapiens]
          Length = 537

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 282 VHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVD 325
           + V V G PN GKSS++N L ++ +  V    G TR +   P+D
Sbjct: 243 IRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLD 286



 Score = 33.1 bits (74), Expect = 0.64
 Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 28/101 (27%)

Query: 358 LEQADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPG 417
           +E +D++L +LDA D   P  C       A V         ++L+L+LNKSDL+      
Sbjct: 126 IEASDVVLEVLDARD---PLGCRCPQVEEAIV-----QSGQKKLVLILNKSDLVPK---- 173

Query: 418 PGPDLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDP 458
                           E L+  L  L+KEL  V    ST P
Sbjct: 174 ----------------ENLESWLNYLKKELPTVVFRASTKP 198


>gi|45643127 guanine nucleotide binding protein-like 3 isoform 2
           [Homo sapiens]
          Length = 537

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 282 VHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVD 325
           + V V G PN GKSS++N L ++ +  V    G TR +   P+D
Sbjct: 243 IRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLD 286



 Score = 33.1 bits (74), Expect = 0.64
 Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 28/101 (27%)

Query: 358 LEQADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPG 417
           +E +D++L +LDA D   P  C       A V         ++L+L+LNKSDL+      
Sbjct: 126 IEASDVVLEVLDARD---PLGCRCPQVEEAIV-----QSGQKKLVLILNKSDLVPK---- 173

Query: 418 PGPDLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDP 458
                           E L+  L  L+KEL  V    ST P
Sbjct: 174 ----------------ENLESWLNYLKKELPTVVFRASTKP 198


>gi|45593130 guanine nucleotide binding protein-like 3 isoform 1
           [Homo sapiens]
          Length = 549

 Score = 34.7 bits (78), Expect = 0.22
 Identities = 17/44 (38%), Positives = 25/44 (56%)

Query: 282 VHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVD 325
           + V V G PN GKSS++N L ++ +  V    G TR +   P+D
Sbjct: 255 IRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLD 298



 Score = 33.1 bits (74), Expect = 0.64
 Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 28/101 (27%)

Query: 358 LEQADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPG 417
           +E +D++L +LDA D   P  C       A V         ++L+L+LNKSDL+      
Sbjct: 138 IEASDVVLEVLDARD---PLGCRCPQVEEAIV-----QSGQKKLVLILNKSDLVPK---- 185

Query: 418 PGPDLPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDP 458
                           E L+  L  L+KEL  V    ST P
Sbjct: 186 ----------------ENLESWLNYLKKELPTVVFRASTKP 210


>gi|226437579 NAC alpha domain containing [Homo sapiens]
          Length = 1562

 Score = 33.1 bits (74), Expect = 0.64
 Identities = 36/138 (26%), Positives = 53/138 (38%), Gaps = 10/138 (7%)

Query: 289 PPNAGKSSLVNLLS-RKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVE 347
           P N  +   ++L S RKPV+  +  P   ++ L  P D A  P L      L     PV 
Sbjct: 562 PQNLKEEGGLDLPSGRKPVAAATIVPRQAKEDLTLPQDSAMTPPLPLQDTDLSSAPKPVA 621

Query: 348 ---------QEGVRRARERLEQADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSS 398
                    +EG+   ++ +    L L   + S    P +   L +  A  G   P DS+
Sbjct: 622 AATIVSQQAEEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSA 681

Query: 399 QRLLLVLNKSDLLSPEGP 416
               L L  +DL S   P
Sbjct: 682 MTPPLPLQDTDLSSAPKP 699


>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
          Length = 1522

 Score = 33.1 bits (74), Expect = 0.64
 Identities = 36/138 (26%), Positives = 53/138 (38%), Gaps = 10/138 (7%)

Query: 289 PPNAGKSSLVNLLS-RKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVE 347
           P N  +   ++L S RKPV+  +  P   ++ L  P D A  P L      L     PV 
Sbjct: 562 PQNLKEEGGLDLPSGRKPVAAATIVPRQAKEDLTLPQDSAMTPPLPLQDTDLSSAPKPVA 621

Query: 348 ---------QEGVRRARERLEQADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSS 398
                    +EG+   ++ +    L L   + S    P +   L +  A  G   P DS+
Sbjct: 622 AATIVSQQAEEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSA 681

Query: 399 QRLLLVLNKSDLLSPEGP 416
               L L  +DL S   P
Sbjct: 682 MTPPLPLQDTDLSSAPKP 699


>gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]
          Length = 1562

 Score = 33.1 bits (74), Expect = 0.64
 Identities = 36/138 (26%), Positives = 53/138 (38%), Gaps = 10/138 (7%)

Query: 289 PPNAGKSSLVNLLS-RKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVE 347
           P N  +   ++L S RKPV+  +  P   ++ L  P D A  P L      L     PV 
Sbjct: 562 PQNLKEEGGLDLPSGRKPVAAATIVPRQAKEDLTLPQDSAMTPPLPLQDTDLSSAPKPVA 621

Query: 348 ---------QEGVRRARERLEQADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSS 398
                    +EG+   ++ +    L L   + S    P +   L +  A  G   P DS+
Sbjct: 622 AATIVSQQAEEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSA 681

Query: 399 QRLLLVLNKSDLLSPEGP 416
               L L  +DL S   P
Sbjct: 682 MTPPLPLQDTDLSSAPKP 699


>gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]
          Length = 1522

 Score = 33.1 bits (74), Expect = 0.64
 Identities = 36/138 (26%), Positives = 53/138 (38%), Gaps = 10/138 (7%)

Query: 289 PPNAGKSSLVNLLS-RKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVE 347
           P N  +   ++L S RKPV+  +  P   ++ L  P D A  P L      L     PV 
Sbjct: 562 PQNLKEEGGLDLPSGRKPVAAATIVPRQAKEDLTLPQDSAMTPPLPLQDTDLSSAPKPVA 621

Query: 348 ---------QEGVRRARERLEQADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSS 398
                    +EG+   ++ +    L L   + S    P +   L +  A  G   P DS+
Sbjct: 622 AATIVSQQAEEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSA 681

Query: 399 QRLLLVLNKSDLLSPEGP 416
               L L  +DL S   P
Sbjct: 682 MTPPLPLQDTDLSSAPKP 699


>gi|14150100 nucleoside-triphosphatase C1orf57 [Homo sapiens]
          Length = 190

 Score = 33.1 bits (74), Expect = 0.64
 Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 1/74 (1%)

Query: 283 HVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVL-LSDTAGLRE 341
           HV +TGPP  GK++L++  S    S   P  G   + +       GF V+ LS T G   
Sbjct: 4   HVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLS 63

Query: 342 GVGPVEQEGVRRAR 355
            VG     G R  R
Sbjct: 64  RVGLEPPPGKRECR 77


>gi|52630419 sterol regulatory element binding transcription factor
           1 isoform a [Homo sapiens]
          Length = 1177

 Score = 32.7 bits (73), Expect = 0.83
 Identities = 48/141 (34%), Positives = 68/141 (48%), Gaps = 24/141 (17%)

Query: 367 MLDASDLASPS------SCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPGPGP 420
           MLD S LA  +      SCN LA+++ + G  SPSD++  +     ++ L +    GPG 
Sbjct: 512 MLDRSRLALCTLVFLCLSCNPLASLLGARGLPSPSDTTS-VYHSPGRNVLGTESRDGPGW 570

Query: 421 D---LPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDP---PLLTRARHQHHLQGCL 474
               LPP + L       L+GLL  +   L  V G+P T P   P +   RH+   Q  L
Sbjct: 571 AQWLLPPVVWL-------LNGLLVLVSLVLLFVYGEPVTRPHSGPAVYFWRHRK--QADL 621

Query: 475 D-ALGHYKQ-SKDLALAAEAL 493
           D A G + Q ++ L LA  AL
Sbjct: 622 DLARGDFAQAAQQLWLALRAL 642


>gi|22547195 sterol regulatory element binding transcription factor
           1 isoform b [Homo sapiens]
          Length = 1147

 Score = 32.7 bits (73), Expect = 0.83
 Identities = 48/141 (34%), Positives = 68/141 (48%), Gaps = 24/141 (17%)

Query: 367 MLDASDLASPS------SCNFLATVVASVGAQSPSDSSQRLLLVLNKSDLLSPEGPGPGP 420
           MLD S LA  +      SCN LA+++ + G  SPSD++  +     ++ L +    GPG 
Sbjct: 482 MLDRSRLALCTLVFLCLSCNPLASLLGARGLPSPSDTTS-VYHSPGRNVLGTESRDGPGW 540

Query: 421 D---LPPHLLLSCLTGEGLDGLLEALRKELAAVCGDPSTDP---PLLTRARHQHHLQGCL 474
               LPP + L       L+GLL  +   L  V G+P T P   P +   RH+   Q  L
Sbjct: 541 AQWLLPPVVWL-------LNGLLVLVSLVLLFVYGEPVTRPHSGPAVYFWRHRK--QADL 591

Query: 475 D-ALGHYKQ-SKDLALAAEAL 493
           D A G + Q ++ L LA  AL
Sbjct: 592 DLARGDFAQAAQQLWLALRAL 612


>gi|14150078 hypothetical protein LOC84273 [Homo sapiens]
          Length = 698

 Score = 32.7 bits (73), Expect = 0.83
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 13/63 (20%)

Query: 273 RRGQRLRSGVHVVVTGPPNAGKSSLVNLLSRKPV-----------SIVSPEPGTTRDVLE 321
           +R  R R  V++V  G  NAGKS+L N L                + +SP PGTT ++L+
Sbjct: 332 QRSWRYRGDVYLV--GATNAGKSTLFNTLLESDYCTAKGSEAIDRATISPWPGTTLNLLK 389

Query: 322 TPV 324
            P+
Sbjct: 390 FPI 392


>gi|33469968 minichromosome maintenance complex component 7 isoform
           1 [Homo sapiens]
          Length = 719

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 26/173 (15%)

Query: 259 RALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNLLSR----------KPVSI 308
           +AL + L   +  + RG ++R  +++ + G P   KS L++ + R          +  S 
Sbjct: 352 KALLLLLVGGVDQSPRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG 411

Query: 309 VSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVEQ-----EGVRRA-RERLEQAD 362
           V       RD +   + L G  ++L+D     +GV  +++     E  R A  E +EQ  
Sbjct: 412 VGLTAAVLRDSVSGELTLEGGALVLAD-----QGVCCIDEFDKMAEADRTAIHEVMEQQT 466

Query: 363 LILAMLDASDLASPSSCNFLATVVASVGAQSPSDSSQRLL----LVLNKSDLL 411
           + +A        + + C+ LA    + G  +P  S ++ +     +L++ DLL
Sbjct: 467 ISIAKAGILTTLN-ARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLL 518


>gi|33469922 minichromosome maintenance complex component 7 isoform
           2 [Homo sapiens]
          Length = 543

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 26/173 (15%)

Query: 259 RALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNLLSR----------KPVSI 308
           +AL + L   +  + RG ++R  +++ + G P   KS L++ + R          +  S 
Sbjct: 176 KALLLLLVGGVDQSPRGMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSG 235

Query: 309 VSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVEQ-----EGVRRA-RERLEQAD 362
           V       RD +   + L G  ++L+D     +GV  +++     E  R A  E +EQ  
Sbjct: 236 VGLTAAVLRDSVSGELTLEGGALVLAD-----QGVCCIDEFDKMAEADRTAIHEVMEQQT 290

Query: 363 LILAMLDASDLASPSSCNFLATVVASVGAQSPSDSSQRLL----LVLNKSDLL 411
           + +A        + + C+ LA    + G  +P  S ++ +     +L++ DLL
Sbjct: 291 ISIAKAGILTTLN-ARCSILAAANPAYGRYNPRRSLEQNIQLPAALLSRFDLL 342


>gi|7262393 ATP-binding cassette, sub-family D (ALD), member 1 [Homo
           sapiens]
          Length = 745

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 13/53 (24%)

Query: 249 LLSPTADIEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVNLL 301
           +++P+ ++ V +L +             R+  G+H+++TGP   GKSSL  +L
Sbjct: 481 IVTPSGEVVVASLNI-------------RVEEGMHLLITGPNGCGKSSLFRIL 520


>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
          Length = 1522

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 36/138 (26%), Positives = 52/138 (37%), Gaps = 10/138 (7%)

Query: 289 PPNAGKSSLVNLLS-RKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGVGPVE 347
           P N  +   ++L S RKPV+  +  P    + L  P D A  P L      L     PV 
Sbjct: 562 PQNLKEEGGLDLPSGRKPVAAATIVPRQAEEDLTLPQDSAMTPPLPLQDTDLSSAPKPVA 621

Query: 348 ---------QEGVRRARERLEQADLILAMLDASDLASPSSCNFLATVVASVGAQSPSDSS 398
                    +EG+   ++ +    L L   + S    P +   L +  A  G   P DS+
Sbjct: 622 AATIVSQQAEEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSA 681

Query: 399 QRLLLVLNKSDLLSPEGP 416
               L L  +DL S   P
Sbjct: 682 MTPPLPLQDTDLSSAPKP 699


>gi|9945308 ATP-binding cassette, sub-family D, member 2 [Homo
           sapiens]
          Length = 740

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 13/31 (41%), Positives = 21/31 (67%)

Query: 272 ARRGQRLRSGVHVVVTGPPNAGKSSLVNLLS 302
           +R   ++  G+H+++TGP   GKSSL  +LS
Sbjct: 495 SRLNFKVEEGMHLLITGPNGCGKSSLFRILS 525


>gi|40805843 K(lysine) acetyltransferase 2B [Homo sapiens]
          Length = 832

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 10 AQAARGPRRLCTRRSSGAPAPGSGATIFALSSGQGRCGIAVI-----RTSGPASGHALRI 64
          A A  GP  L  + ++  PAP  G+   A + G G CG A          GP  G + RI
Sbjct: 16 AGAGAGPGALPPQPAALPPAPPQGSPCAAAAGGSGACGPATAVAAAGTAEGPGGGGSARI 75

Query: 65 LTAPRDLPLARHA 77
                L  A  A
Sbjct: 76 AVKKAQLRSAPRA 88


>gi|21536378 ATP-binding cassette, sub-family B (MDR/TAP), member 11
           [Homo sapiens]
          Length = 1321

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 34/143 (23%), Positives = 55/143 (38%), Gaps = 35/143 (24%)

Query: 278 LRSGVHVVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTA 337
           ++ G    + GP  AGKS+ + L+ R              D  E  V + G  +   +  
Sbjct: 445 IKPGEMTALVGPSGAGKSTALQLIQR------------FYDPCEGMVTVDGHDIRSLNIQ 492

Query: 338 GLREGVGPVEQ----------EGVRRARERLEQADLILAMLDASDLASPSSCNFLA---- 383
            LR+ +G VEQ          E +R  RE     D++ A  +A      ++ NF+     
Sbjct: 493 WLRDQIGIVEQEPVLFSTTIAENIRYGREDATMEDIVQAAKEA------NAYNFIMDLPQ 546

Query: 384 ---TVVASVGAQSPSDSSQRLLL 403
              T+V   G Q      QR+ +
Sbjct: 547 QFDTLVGEGGGQMSGGQKQRVAI 569


>gi|55953087 G protein-binding protein CRFG [Homo sapiens]
          Length = 634

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 3/91 (3%)

Query: 284 VVVTGPPNAGKSSLVNLLSRKPVSIVSPEPGTTRDVLETPVDLAGFPVLLSDTAGLREGV 343
           +++ G PN GKSS +N ++R  V  V P   TT+ +    +D       + DT G+ +  
Sbjct: 171 LLLCGYPNVGKSSFINKVTRADVD-VQPYAFTTKSLFVGHMDYKYLRWQVVDTPGILD-- 227

Query: 344 GPVEQEGVRRARERLEQADLILAMLDASDLA 374
            P+E       +     A L  A+L   DL+
Sbjct: 228 HPLEDRNTIEMQAITALAHLRAAVLYVMDLS 258


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.136    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,409,973
Number of Sequences: 37866
Number of extensions: 1236063
Number of successful extensions: 4037
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 3976
Number of HSP's gapped (non-prelim): 112
length of query: 524
length of database: 18,247,518
effective HSP length: 107
effective length of query: 417
effective length of database: 14,195,856
effective search space: 5919671952
effective search space used: 5919671952
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.