Guide to the Human Genome
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Name: GTPBP4 Sequence: fasta or formatted (634aa) NCBI GI: 55953087
Description:

G protein-binding protein CRFG

Referenced in:

Nucleus and Nucleolus
Additional Guanine Nucleotide-binding Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         36           2
 C cysteine            1.1          7           1
 D aspartate           7.6         48           2
 E glutamate           7.3         46           3
 F phenylalanine       2.4         15           1
 G glycine             3.8         24           1
 H histidine           3.2         20           1
 I isoleucine          5.5         35           1
 K lysine             10.9         69           3
 L leucine             9.6         61           3
 M methionine          3.5         22           2
 N asparagine          3.3         21           1
 P proline             3.9         25           2
 Q glutamine           4.1         26           2
 R arginine            8.5         54           2
 S serine              4.7         30           2
 T threonine           5.0         32           2
 V valine              6.2         39           2
 W tryptophan          0.5          3           1
 Y tyrosine            3.3         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-binding protein CRFG 
DRG2                  0.020   developmentally regulated GTP binding protein 2 [Homo...
GTPBP5                0.019   GTP binding protein 5 
DRG1                  0.019   developmentally regulated GTP binding protein 1 [Homo...
ANKRD12               0.018   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.018   ankyrin repeat domain 12 isoform 1 
GAS8                  0.018   growth arrest-specific 8 
MYH9                  0.016   myosin, heavy polypeptide 9, non-muscle 
MYH13                 0.015   myosin, heavy polypeptide 13, skeletal muscle [Homo...
GTPBP10               0.015   GTP-binding protein 10 isoform 2 
WDR87                 0.014   NYD-SP11 protein 
HMMR                  0.013   hyaluronan-mediated motility receptor isoform d [Ho...
HMMR                  0.013   hyaluronan-mediated motility receptor isoform a [Ho...
HMMR                  0.013   hyaluronan-mediated motility receptor isoform c [Ho...
HMMR                  0.013   hyaluronan-mediated motility receptor isoform b [Ho...
KIF16B                0.013   kinesin-like motor protein C20orf23 
EIF5B                 0.012   eukaryotic translation initiation factor 5B 
GOLGB1                0.012   golgi autoantigen, golgin subfamily b, macrogolgin ...
HIRIP3                0.012   HIRA interacting protein 3 
MYH6                  0.012   myosin heavy chain 6 
ACIN1                 0.012   apoptotic chromatin condensation inducer 1 
GOLGA4                0.012   golgi autoantigen, golgin subfamily a, 4 
SSRP1                 0.012   structure specific recognition protein 1 
GTPBP10               0.012   GTP-binding protein 10 isoform 1 
BAZ2B                 0.011   bromodomain adjacent to zinc finger domain, 2B [Homo...
MYH7                  0.011   myosin, heavy chain 7, cardiac muscle, beta 
CCDC6                 0.011   coiled-coil domain containing 6 
GOLGA5                0.010   Golgi autoantigen, golgin subfamily a, 5 
CROP                  0.010   cisplatin resistance-associated overexpressed protei...
CROP                  0.010   cisplatin resistance-associated overexpressed protei...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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