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Search of human proteins with 190684675
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|190684675 X-ray repair cross complementing protein 1 [Homo
sapiens]
(633 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|190684675 X-ray repair cross complementing protein 1 [Homo sa... 1278 0.0
gi|169203492 PREDICTED: similar to hCG1640299 [Homo sapiens] 82 1e-15
gi|169202280 PREDICTED: similar to hCG1640299 [Homo sapiens] 82 1e-15
gi|55741677 SET domain containing 1A [Homo sapiens] 53 7e-07
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 50 5e-06
gi|239755636 PREDICTED: similar to hCG1640299 [Homo sapiens] 45 2e-04
gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithora... 45 2e-04
gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithor... 45 2e-04
gi|194440660 topoisomerase (DNA) II binding protein 1 [Homo sapi... 45 2e-04
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 44 3e-04
gi|188536004 zinc finger protein 469 [Homo sapiens] 44 5e-04
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 44 6e-04
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 44 6e-04
gi|115648142 centrosomal protein 164kDa [Homo sapiens] 43 8e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 43 0.001
gi|71043876 undifferentiated embryonic cell transcription factor... 43 0.001
gi|5032033 RNA binding motif protein 6 [Homo sapiens] 42 0.001
gi|188219563 hypothetical protein LOC126731 [Homo sapiens] 42 0.001
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 42 0.002
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 42 0.002
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 42 0.002
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 42 0.002
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 42 0.002
gi|39930375 enabled homolog isoform b [Homo sapiens] 42 0.002
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 42 0.002
gi|154146199 sal-like 3 [Homo sapiens] 42 0.002
gi|163965366 nascent polypeptide-associated complex alpha subuni... 42 0.002
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 42 0.002
gi|55956788 nucleolin [Homo sapiens] 41 0.003
gi|169202233 PREDICTED: hypothetical protein [Homo sapiens] 41 0.003
>gi|190684675 X-ray repair cross complementing protein 1 [Homo
sapiens]
Length = 633
Score = 1278 bits (3307), Expect = 0.0
Identities = 633/633 (100%), Positives = 633/633 (100%)
Query: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRMFGPDKLVRAA 120
GNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRMFGPDKLVRAA
Sbjct: 61 GNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRMFGPDKLVRAA 120
Query: 121 AEKRWDRVKIVCSQPYSKDSPFGLSFVRFHSPPDKDEAEAPSQKVTVTKLGQFRVKEEDE 180
AEKRWDRVKIVCSQPYSKDSPFGLSFVRFHSPPDKDEAEAPSQKVTVTKLGQFRVKEEDE
Sbjct: 121 AEKRWDRVKIVCSQPYSKDSPFGLSFVRFHSPPDKDEAEAPSQKVTVTKLGQFRVKEEDE 180
Query: 181 SANSLRPGALFFSRINKTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQE 240
SANSLRPGALFFSRINKTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQE
Sbjct: 181 SANSLRPGALFFSRINKTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQE 240
Query: 241 SPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPR 300
SPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPR
Sbjct: 241 SPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPR 300
Query: 301 GEGTEPRRPRAGPEELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTRDSTHL 360
GEGTEPRRPRAGPEELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTRDSTHL
Sbjct: 301 GEGTEPRRPRAGPEELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTRDSTHL 360
Query: 361 ICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSQRYLMAGPGSSSEEDEASHSGG 420
ICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSQRYLMAGPGSSSEEDEASHSGG
Sbjct: 361 ICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSQRYLMAGPGSSSEEDEASHSGG 420
Query: 421 SGDEAPKLPQKQPQTKTKPTQAAGPSSPQKPPTPEETKAASPVLQEDIDIEGVQSEGQDN 480
SGDEAPKLPQKQPQTKTKPTQAAGPSSPQKPPTPEETKAASPVLQEDIDIEGVQSEGQDN
Sbjct: 421 SGDEAPKLPQKQPQTKTKPTQAAGPSSPQKPPTPEETKAASPVLQEDIDIEGVQSEGQDN 480
Query: 481 GAEDSGDTEDELRRVAEQKEHRLPPGQEENGEDPYAGSTDENTDSEEHQEPPDLPVPELP 540
GAEDSGDTEDELRRVAEQKEHRLPPGQEENGEDPYAGSTDENTDSEEHQEPPDLPVPELP
Sbjct: 481 GAEDSGDTEDELRRVAEQKEHRLPPGQEENGEDPYAGSTDENTDSEEHQEPPDLPVPELP 540
Query: 541 DFFQGKHFFLYGEFPGDERRKLIRYVTAFNGELEDYMSDRVQFVITAQEWDPSFEEALMD 600
DFFQGKHFFLYGEFPGDERRKLIRYVTAFNGELEDYMSDRVQFVITAQEWDPSFEEALMD
Sbjct: 541 DFFQGKHFFLYGEFPGDERRKLIRYVTAFNGELEDYMSDRVQFVITAQEWDPSFEEALMD 600
Query: 601 NPSLAFVRPRWIYSCNEKQKLLPHQLYGVVPQA 633
NPSLAFVRPRWIYSCNEKQKLLPHQLYGVVPQA
Sbjct: 601 NPSLAFVRPRWIYSCNEKQKLLPHQLYGVVPQA 633
>gi|169203492 PREDICTED: similar to hCG1640299 [Homo sapiens]
Length = 210
Score = 82.4 bits (202), Expect = 1e-15
Identities = 54/167 (32%), Positives = 95/167 (56%), Gaps = 11/167 (6%)
Query: 14 SQDSTHCAENLLKADTYRK-WRAA---KAGEKTISVVLQLEKEEQIHSVDIGNDGSAFVE 69
++D + ENLL D+ R+ W K+G+ + V LQLE+ +D+GN G AF++
Sbjct: 45 AKDPKYPVENLLNPDSPRRPWLGCPQDKSGQ--LKVELQLERAVPTGYIDVGNCGCAFLQ 102
Query: 70 VLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRMFGPDKLVRAAAEKRWDRVK 129
+ VG S+ ++ + LL ++ MS ++S+ G N + VRMF + A+ + WDR++
Sbjct: 103 IDVGHSSWPL-DRPFITLLPATTLMSLTDSKQGKNRSGVRMFKDVDFLAPASGELWDRLR 161
Query: 130 IVCSQPYSKDSPFGLSFVRFHSPPDK--DEAEAPSQKVT--VTKLGQ 172
+ CS+P+++ FGL+F+R S D D PS ++ + K+G+
Sbjct: 162 LTCSRPFTRHQSFGLAFLRVCSSLDSLDDSVVGPSALLSSVLNKVGE 208
>gi|169202280 PREDICTED: similar to hCG1640299 [Homo sapiens]
Length = 210
Score = 82.4 bits (202), Expect = 1e-15
Identities = 54/167 (32%), Positives = 95/167 (56%), Gaps = 11/167 (6%)
Query: 14 SQDSTHCAENLLKADTYRK-WRAA---KAGEKTISVVLQLEKEEQIHSVDIGNDGSAFVE 69
++D + ENLL D+ R+ W K+G+ + V LQLE+ +D+GN G AF++
Sbjct: 45 AKDPKYPVENLLNPDSPRRPWLGCPQDKSGQ--LKVELQLERAVPTGYIDVGNCGCAFLQ 102
Query: 70 VLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRMFGPDKLVRAAAEKRWDRVK 129
+ VG S+ ++ + LL ++ MS ++S+ G N + VRMF + A+ + WDR++
Sbjct: 103 IDVGHSSWPL-DRPFITLLPATTLMSLTDSKQGKNRSGVRMFKDVDFLAPASGELWDRLR 161
Query: 130 IVCSQPYSKDSPFGLSFVRFHSPPDK--DEAEAPSQKVT--VTKLGQ 172
+ CS+P+++ FGL+F+R S D D PS ++ + K+G+
Sbjct: 162 LTCSRPFTRHQSFGLAFLRVCSSLDSLDDSVVGPSALLSSVLNKVGE 208
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 53.1 bits (126), Expect = 7e-07
Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 29/163 (17%)
Query: 154 DKDEAEAPSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPSYAA 213
D++EA ++K T G E++ES +S +K S SD S +
Sbjct: 989 DREEAVDTTKKETEVSDG-----EDEESDSS-----------SKCSLYADSDGENDSTSD 1032
Query: 214 ATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRP 273
+ +SS++SS+S S + S+S ES + E+++ +P A S S P R
Sbjct: 1033 SESSSSSSSSSSSSSSSSSSSSSSSSES---------SSEDEEEEERPAALPSASPPPR- 1082
Query: 274 KLPAPTRTPATAPVPARAQGA-VTGKPRGEGTEPRRPRAGPEE 315
++P PT P PVP R G+ VT P E + P RP AGP E
Sbjct: 1083 EVPVPTPAPVEVPVPERVAGSPVTPLPEQEAS-PARP-AGPTE 1123
Score = 35.8 bits (81), Expect = 0.12
Identities = 76/361 (21%), Positives = 114/361 (31%), Gaps = 80/361 (22%)
Query: 199 SPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLN------- 251
S +AS A + AA T A++A+SSAS S + S+S S R D N
Sbjct: 315 SASSASTTASTAIAATT--AATASSSASSSSLSSSSSSSSSSSSSQFRSSDANYPAYYES 372
Query: 252 -QEEKKTPSKPPAQLSPSVPKRPKLP---------APTRTPATAPVPARAQGAVTGKPRG 301
++ S PP + + P P P P+ T P P+R P
Sbjct: 373 WNRYQRHTSYPPRRATREEP--PGAPFAENTAERFPPSYTSYLPPEPSRPTDQDYRPPAS 430
Query: 302 EGTEPRRPRAGPEELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTRDSTHLI 361
E P P G G G +P R E+R ++T+
Sbjct: 431 EAPPPEPPEPGGGGGG-----------GGPSPEREEVRTSPRPASPARSGSPAPETTNES 479
Query: 362 CAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSQRYLMAGPGSSSEEDEASHSG-- 419
FA R+ L QR + S +EE+E + S
Sbjct: 480 VPFAQHSSLDS------------------RIEMLLKEQRSKFSFLASDTEEEEENSSMVL 521
Query: 420 GSGDEAPKLPQKQPQTKTKPTQAAGPSSPQKPPTPEETKAASPVLQEDIDIEGVQSEGQD 479
G+ D ++P GP +P PP P + +P
Sbjct: 522 GARDTGSEVPS---------GSGHGPCTP--PPAPANFEDVAP----------------- 553
Query: 480 NGAEDSGDTEDELRRVAEQKEHRLPPGQEENGEDPYAGSTDENTDSEEHQEPPDLPVPEL 539
G+ + G T + + + + G + D G + + Q PP P P
Sbjct: 554 TGSGEPGATRESPKANGQNQASPCSSGDDMEISDDDRGGSPPPAPTPPQQPPPPPPPPPP 613
Query: 540 P 540
P
Sbjct: 614 P 614
Score = 34.3 bits (77), Expect = 0.36
Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 23/152 (15%)
Query: 395 RLPSQRYLMAGPGSSSEEDEASHSGGSGDEAPKLPQKQPQTKTKPTQAAG-PSSP-QKPP 452
RLPS + P SE E P P ++ + + + AG P P KPP
Sbjct: 889 RLPSFKVKRKEPSEISEASEEKRP------RPSTPAEEDEDDPEQEKEAGEPGRPGTKPP 942
Query: 453 TPEETKAASPVLQED---IDIEGVQ----SEGQDNGAEDSGDTEDELRRVA---EQKEHR 502
+E + + +D EG + S + + +D D EDE R A +KE
Sbjct: 943 KRDEERGKTQGKHRKSFALDSEGEEASQESSSEKDEEDDEEDEEDEDREEAVDTTKKETE 1002
Query: 503 LPPGQEENGEDP-----YAGSTDENTDSEEHQ 529
+ G++E + YA S EN + + +
Sbjct: 1003 VSDGEDEESDSSSKCSLYADSDGENDSTSDSE 1034
Score = 29.6 bits (65), Expect = 8.8
Identities = 32/138 (23%), Positives = 52/138 (37%), Gaps = 18/138 (13%)
Query: 406 PGSSSEEDEASHSGGSGDEA----------PKLPQKQPQTKTKPTQAAGPSSPQKPPTPE 455
PG S D A G +G EA +LP + K K +S +K P P
Sbjct: 858 PGLLSLVDWAKSGGTTGIEAFAFGSGLRGALRLPSFK--VKRKEPSEISEASEEKRPRP- 914
Query: 456 ETKAASPVLQEDIDIEGVQSEGQDNGAEDSGDTEDELRRVAEQKEHRLPPGQEENGEDPY 515
S +ED D + E + G + + + R Q +HR + GE+
Sbjct: 915 -----STPAEEDEDDPEQEKEAGEPGRPGTKPPKRDEERGKTQGKHRKSFALDSEGEEAS 969
Query: 516 AGSTDENTDSEEHQEPPD 533
S+ E + ++ ++ D
Sbjct: 970 QESSSEKDEEDDEEDEED 987
>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
Length = 953
Score = 50.4 bits (119), Expect = 5e-06
Identities = 91/423 (21%), Positives = 148/423 (34%), Gaps = 73/423 (17%)
Query: 148 RFHSPPDKDEAEAPSQKVTVTKLGQFRVKEEDESANSLRPG---------ALFFSRINKT 198
R PP + +AE P ++ T +VK DE + R ++ SR +
Sbjct: 486 RSPQPPSR-QAEPPKKEAATTGP---QVKRADEWKDPWRRSKSPKKKLGVSVSPSRARRR 541
Query: 199 SPVTASDPAGPSYAAATLQASSAASSASPVSRAIGST-------SKPQESPKGKRKLDLN 251
+AS + + + ++ ++SS + S S SR+ S+ S S G R +
Sbjct: 542 RKTSASSASASNSSRSSSRSSSYSGSGSSRSRSRSSSYSSYSSRSSRHSSFSGSRSRSRS 601
Query: 252 QEEKKTPSKPPAQLSPSVPKRPKLPAPTRTPA-------TAPVPARAQGAVTGKPRGEGT 304
+PS P+ PS+ + + PAP A AP PA Q T P E T
Sbjct: 602 FSSSPSPSPTPSPHRPSIRTKGE-PAPPPGKAGEKSVKKPAPPPAPPQATKTTAPVPEPT 660
Query: 305 EPRRPRAGPEELGKILQGVVVVLSGFQNPFRSELRDKALE-----LGAKYRPDWTRDSTH 359
+P PR + + P R+ R + L G+ Y +R +
Sbjct: 661 KPGDPREARRK---------------ERPARTPPRRRTLSGSGSGSGSSYSGSSSRSRSL 705
Query: 360 LICAFAN----TPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSQRYLMAGPGSSSEEDEA 415
+ + ++ T S + + + R P+ G S +ED
Sbjct: 706 SVSSVSSVSSATSSSSSAHSVDSEDMYADLASPVSSASSRSPAPAQTRKEKGKSKKEDGV 765
Query: 416 SHSGGSGDEAPKLPQKQPQTKTKPTQAAGPSSPQKPPTPEETKAASP-----VLQEDIDI 470
D + QP KP AG S Q+P TP++ P V ++I +
Sbjct: 766 KEEKRKRDSST-----QPPKSAKPP--AGGKSSQQPSTPQQAPPGQPQQGTFVAHKEIKL 818
Query: 471 EGVQSEGQDNGAEDSGDTEDELRRVAEQKEHRLPPGQEENGEDPYAGSTDENTDSEEHQE 530
+ N A D G + R K+ + PP + P GS D +
Sbjct: 819 TLL------NKAADKGSRK---RYEPSDKDRQSPPPAKRPNTSPDRGSRDRKSGGRLGSP 869
Query: 531 PPD 533
P+
Sbjct: 870 KPE 872
>gi|239755636 PREDICTED: similar to hCG1640299 [Homo sapiens]
Length = 187
Score = 45.4 bits (106), Expect = 2e-04
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 37 KAGEKTISVVLQLEKEEQIHSVDIGNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSP 96
K+G+ + V LQLE+ +D+GN G AF+++ VG S+ ++ + LL ++ MS
Sbjct: 86 KSGQ--LKVELQLERAVPTGYIDVGNCGCAFLQIDVGHSSWPL-DRPFITLLPATTLMSL 142
Query: 97 SESRSGSNPNRVRMFGPDK 115
++S+ G N + VRMF K
Sbjct: 143 TDSKQGKNRSGVRMFKDGK 161
>gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 6 [Homo sapiens]
Length = 1093
Score = 45.4 bits (106), Expect = 2e-04
Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 11/209 (5%)
Query: 73 GSSAGGAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRMFGPDKLVRAAAEKRWDRVKIVC 132
G GGAG + S F+S SRS S P+ + P R + R D+ ++
Sbjct: 192 GGGGGGAGGGGGSMGGGGSGFISGRRSRSAS-PSTQQEKHPTHHERGQKKSRKDKERLKQ 250
Query: 133 SQPYSKDSPFGLSFVRFHSPPDKDEAEAPSQKVTVTKLGQFRVKEEDESANSLR-PGALF 191
+SP + +PP A+ S + + + +E ES+ + +
Sbjct: 251 KHKKRPESPPSIL-----TPPVVPTADKVSSSASSSSHHEASTQETSESSRESKGKKSSS 305
Query: 192 FSRINKTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLN 251
S +K +++ +A++ +SS++SS P A+ S Q SP L
Sbjct: 306 HSLSHKGKKLSSGKGVSSFTSASSSSSSSSSSSGGPFQPAVSSL---QSSPDFSAFPKLE 362
Query: 252 QEEKKTPSKPPAQLSPSVPKRPKLPAPTR 280
Q E+ SKP A +PS P P P P +
Sbjct: 363 QPEEDKYSKPTAP-APSAPPSPSAPEPPK 390
Score = 33.9 bits (76), Expect = 0.47
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 14/65 (21%)
Query: 408 SSSEEDEASHSGGSGDEA-------------PKLPQKQPQTKTKPTQAAGPSSPQKPPTP 454
SSS +S SGG A PKL Q + +KPT A PS+P P P
Sbjct: 328 SSSSSSSSSSSGGPFQPAVSSLQSSPDFSAFPKLEQPEEDKYSKPT-APAPSAPPSPSAP 386
Query: 455 EETKA 459
E KA
Sbjct: 387 EPPKA 391
>gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 3 [Homo sapiens]
Length = 568
Score = 45.4 bits (106), Expect = 2e-04
Identities = 85/401 (21%), Positives = 144/401 (35%), Gaps = 67/401 (16%)
Query: 157 EAEAPSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPSYAAATL 216
E P + KL F ED L+ G I+ +S ++S + S ++++
Sbjct: 109 EGHPPVNHLRCEKL-TFNNPTEDFRRKLLKAGGDPNRSIHTSSSSSSSSSSSSSSSSSSS 167
Query: 217 QASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEK------------KTPSKPPAQ 264
+SS++SS+S S + S+S S KL +EK K PS+ +
Sbjct: 168 SSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKSAFKEPSRDHNK 227
Query: 265 LSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPEELGKILQGVV 324
S K+PK P + P A + P+ EP+ P+ ++
Sbjct: 228 SSKESSKKPKENKPLKEEKIVPKMAFKE------PKPMSKEPK-----PD------SNLL 270
Query: 325 VVLSGFQN--PFRSELRDKALELGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVR 382
+ SG P + + EL AK R S L +F++ P
Sbjct: 271 TITSGQDKKAPSKRPPISDSEELSAKKRK--KSSSEALFKSFSSAPPL------------ 316
Query: 383 KEWVLDCHRMRRRLPSQRYLMAGPGS-SSEEDEASHS----------GGSGDEAPKLPQK 431
+L C ++++ + ++ G SE E S D + K
Sbjct: 317 ---ILTCSADKKQIKDKSHVKMGKVKIESETSEKKKSTLPPFDDIVDPNDSDVEENISSK 373
Query: 432 QPQTKTKPTQAAGPSSPQKPPTPEETKAASPVLQEDIDIEGVQSEGQDNGAEDSGDTEDE 491
+P+ A+ SS TP +T+ P+ D+ +E + + ED+ D + E
Sbjct: 374 --SDSEQPSPASSSSSSSSSFTPSQTRQQGPLRSIMKDLHSDDNEEESDEVEDN-DNDSE 430
Query: 492 LRRVAEQKEHRLPPGQEENGEDPYAGSTDENTDSEEHQEPP 532
+ R + R +G D S + S H EPP
Sbjct: 431 MERPVNRGGSRSRRVSLSDGSD----SESSSASSPLHHEPP 467
>gi|194440660 topoisomerase (DNA) II binding protein 1 [Homo
sapiens]
Length = 1522
Score = 45.1 bits (105), Expect = 2e-04
Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 23/156 (14%)
Query: 256 KTPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGE-----GTEPRRPR 310
+TP +P Q ++P TP + + Q A+ R + + +
Sbjct: 847 ETPGRPSQQ-----KRKPS------TPLSEVIVKNLQLALANSSRNAVALSASPQLKEAQ 895
Query: 311 AGPEELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTRDSTHLICAFANTP-- 368
+ EE K L VVV +S + +SEL A LGA YR W+ D T + P
Sbjct: 896 SEKEEAPKPLHKVVVCVSKKLSKKQSELNGIAASLGADYR--WSFDETVTHFIYQGRPND 953
Query: 369 ---KYSQVLGLGGRIVRKEWVLDCHRMRRRLPSQRY 401
+Y V G IV + W+LDC + + LP Y
Sbjct: 954 TNREYKSVKERGVHIVSEHWLLDCAQECKHLPESLY 989
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 44.3 bits (103), Expect = 3e-04
Identities = 42/144 (29%), Positives = 57/144 (39%), Gaps = 23/144 (15%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRA----------IGSTSKPQESPKGKR 246
+ +P A PA AA SA ++A P R+ I S P P+G
Sbjct: 49 RPAPAAAHPPAPRERPAAA--RLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAP 106
Query: 247 KLDLNQEEKKTPSKP----PAQLSPSVPKRPKLP----APTRTPATAPVPARAQGAVTGK 298
+ P++P P PS P RP LP A R P P+P QG+VT +
Sbjct: 107 AVPAAPSPGPLPARPSSPPPRPSLPSGPHRPVLPPSALAAPRPPLARPLP---QGSVTAR 163
Query: 299 PRGEGTEPRRPRAGPEELGKILQG 322
+ + RR PE LG + G
Sbjct: 164 EQEQRPRSRRRAGAPEALGPVHAG 187
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 43.9 bits (102), Expect = 5e-04
Identities = 48/169 (28%), Positives = 67/169 (39%), Gaps = 36/169 (21%)
Query: 151 SPPDKDEAEAPSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPS 210
S D+ A PS+ + +F V ++ SL PG L N P T GPS
Sbjct: 3651 SSKDRSAASTPSKAL------KFPVHPR-KAVGSLAPGELARGTENGMKPATPKAKPGPS 3703
Query: 211 YAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKTPSKPPAQLSPSVP 270
S + S P ++ G S+PQ + L E TP+KP
Sbjct: 3704 --------SQGSGSPRPGTKT-GGGSQPQPASG-----QLQSETATTPAKPSF------- 3742
Query: 271 KRPKLPAPTRTPATAPVPARAQG-AVTGKPRGEGTEPRRPRAGPEELGK 318
P+R+PA +PARAQ + T PR G + GP+E G+
Sbjct: 3743 -------PSRSPAPERLPARAQAKSCTKGPREAGEQGPHGSLGPKEKGE 3784
Score = 34.3 bits (77), Expect = 0.36
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 11/66 (16%)
Query: 428 LPQKQPQTKTKPTQAAG------PSSP--QKPPTPEETKAASPVLQEDIDIEGVQSEGQD 479
LP++ P T P++A G P+SP + PP P++ A SP + +GVQ+ D
Sbjct: 2102 LPREDPLTS--PSRAQGGLGGQLPASPSCRDPPGPQQLLACSPAWAPLEEADGVQAT-TD 2158
Query: 480 NGAEDS 485
GAEDS
Sbjct: 2159 TGAEDS 2164
Score = 32.7 bits (73), Expect = 1.0
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 16/147 (10%)
Query: 404 AGPGSSSEEDEA----SHSGGSGDEAPKLPQKQPQTKTKPTQAAGPSSPQKPPTPEETKA 459
A PG SS+ + + +GG P Q Q +T T P A PS P + P PE A
Sbjct: 3698 AKPGPSSQGSGSPRPGTKTGGGSQPQPASGQLQSETATTP---AKPSFPSRSPAPERLPA 3754
Query: 460 ASPVLQEDIDIEGVQSEGQDNGAEDSGDTEDELRRVAEQKEHRLP-PGQEEN----GEDP 514
+ Q +G + G + G S +++ ++K+ ++P P + E+ G P
Sbjct: 3755 RA---QAKSCTKGPREAG-EQGPHGSLGPKEKGESSTKRKKGQVPGPARSESVGSFGRAP 3810
Query: 515 YAGSTDENTDSEEHQEPPDLPVPELPD 541
A T ++ LP P+
Sbjct: 3811 SAPDKPPRTPRKQATPSRVLPTKPKPN 3837
Score = 31.6 bits (70), Expect = 2.3
Identities = 34/139 (24%), Positives = 54/139 (38%), Gaps = 21/139 (15%)
Query: 196 NKTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKP----QESPKGKRKLDLN 251
++T P P P AA L +P G+ +P E+ +L +
Sbjct: 127 SRTKPTLDETPENPQLEAAQLPEVD-----TPQGPGTGAPLRPGLPRTEAQPAAEELGFH 181
Query: 252 QEEKKTPSKPPAQ--LSPSVPKRPKLPAPTRTPATAPVPA------RAQGAVTGKPRGEG 303
+ ++ PS + SPS RP P P ++ T+P+ +A GA + P E
Sbjct: 182 RCFQEPPSSFTSTNYTSPSATPRPPAPGPPQSRGTSPLQPGSYPEYQASGADSWPPAAEN 241
Query: 304 TEPRR----PRAGPEELGK 318
+ P P A PE + K
Sbjct: 242 SFPGANFGVPPAEPEPIPK 260
Score = 31.2 bits (69), Expect = 3.0
Identities = 32/136 (23%), Positives = 47/136 (34%), Gaps = 11/136 (8%)
Query: 185 LRPGALFFSRINKTSPVTASDPAGPSYAAATLQASSAASSASPV----SRAIGSTSKPQE 240
LR A+ F+R + P G ++A ++ + +P R+ G +
Sbjct: 3166 LREHAVRFARRGQARRSLGDLPGGLEGSSAVAHLLNSITEPAPKHHRGKRSAGKAAGSPG 3225
Query: 241 SPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPR 300
P G QE + P + P P P TP +A A A G PR
Sbjct: 3226 DPWG-------QEGEAKKDSPGERAKPRARSTPSNPDGAATPDSASATALADAGSPGPPR 3278
Query: 301 GEGTEPRRPRAGPEEL 316
+ P AG E L
Sbjct: 3279 TTPSPSPDPWAGGEPL 3294
Score = 30.4 bits (67), Expect = 5.2
Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 21/168 (12%)
Query: 171 GQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPSYAAATLQASSAASSASPVSR 230
G KE+ ES+ + G + +++ P+ P T + + S P
Sbjct: 3775 GSLGPKEKGESSTKRKKGQVPGPARSESVGSFGRAPSAPDKPPRTPRKQATPSRVLPTKP 3834
Query: 231 AIGSTSKPQESPKGKRKLDLNQEEKKTPSKPPAQLSPSVPK-RPKLPAPTRTPATAPVPA 289
S +KP+ P +RK + ++K +L + P+ RP L P R A
Sbjct: 3835 KPNSQNKPRPPPSEQRKAEPGHTQRKD------RLGKAFPQGRPLLRPPKRGTA------ 3882
Query: 290 RAQGAVTGKPRGEGTEPRRPRAGPEELGKILQGVVVVLSGFQNPFRSE 337
GA E EP R + + Q L+GF+ P + +
Sbjct: 3883 -VHGA-------EPAEPHTHRTAEAQSDLLSQLFGQRLTGFKIPLKKD 3922
Score = 30.4 bits (67), Expect = 5.2
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 405 GPGSSSEEDEASHSGGSGDEAPKLPQKQ-PQTKTKPTQAAGPSSPQKP-PTPEETKAASP 462
GP S + + D+ P+ P+KQ ++ PT+ P+S KP P P E + A P
Sbjct: 3796 GPARSESVGSFGRAPSAPDKPPRTPRKQATPSRVLPTKPK-PNSQNKPRPPPSEQRKAEP 3854
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 43.5 bits (101), Expect = 6e-04
Identities = 42/142 (29%), Positives = 56/142 (39%), Gaps = 23/142 (16%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRA----------IGSTSKPQESPKGKR 246
+ +P A PA AA SA ++A P R+ I S P P+G
Sbjct: 49 RPAPAAAHPPAPRERPAAA--RLSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAP 106
Query: 247 KLDLNQEEKKTPSKP----PAQLSPSVPKRPKLP----APTRTPATAPVPARAQGAVTGK 298
+ P++P P PS P RP LP A R P P+P QG+VT +
Sbjct: 107 AVPAAPSPGPLPARPSSPPPRPSLPSGPHRPVLPPSALAAPRPPLARPLP---QGSVTAR 163
Query: 299 PRGEGTEPRRPRAGPEELGKIL 320
+ + RR PE LG L
Sbjct: 164 EQEQRPRSRRRAGAPEALGPAL 185
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 43.5 bits (101), Expect = 6e-04
Identities = 87/332 (26%), Positives = 119/332 (35%), Gaps = 56/332 (16%)
Query: 151 SPPDKDEAEAPSQKVTVTKLGQFRVKEEDES-ANSLRPGALFFSRINKTSPVTASDPAGP 209
+P + AE P Q +E+D S A+ P FFS V + +PAGP
Sbjct: 753 APSASETAEEPLQDPNWPPPPPPAPEEQDLSMADFPPPEEAFFS-------VASPEPAGP 805
Query: 210 SYAAATLQASSAASSASPVSRAI---GSTSKPQESPKGKRKLDLNQEEKKTPSKPPAQLS 266
S + L +S AASS+S + I GS P P K P K P S
Sbjct: 806 S-GSPELVSSPAASSSSATALQIQPPGSPDPPPAPPAPAPASSAPGHVAKLPQKEPVGCS 864
Query: 267 P-SVPKRPKLPAPTRTPATAP-VPARAQGAVTGKPRGEGTEPRRPRAGPEELGKILQGVV 324
P R + AP TP+ V R+ GA P G T P A + L + L G
Sbjct: 865 KGGGPPREDVGAPLVTPSLLQMVRLRSVGA----PGGAPTPALGPSAPQKPLRRALSGRA 920
Query: 325 VVLSGFQNPFRSELRDKALELGAKYRPDWTRDSTHLICAFANTPKYSQ------------ 372
+ + + +R KA L A S L A N P ++
Sbjct: 921 SPVPAPSSGLHAAVRLKACSLAA---------SEGLSSAQPNGPPEAEPRPPQSPASTAS 971
Query: 373 -VLGLGGRIVRKEWVLDCHRMRRRLPSQRYLMAGPGSSSEEDEASHSGGSGDEAPKLPQK 431
+ G R ++ E + + QR L+A S SE+ P+ P+K
Sbjct: 972 FIFSKGSRKLQLERPVS---PETQADLQRNLVAELRSISEQ-----------RPPQAPKK 1017
Query: 432 QPQTKTKPTQAAGPSSPQKPPTPEETKAASPV 463
P K P A PS PP A P+
Sbjct: 1018 SP--KAPPPVARKPSVGVPPPASPSYPRAEPL 1047
Score = 33.1 bits (74), Expect = 0.80
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Query: 210 SYAAATLQASSAASSASPVSRAIGSTSKPQES-PKGKRKLDLNQEEKKTPSKPPAQLSPS 268
SY A + A A S S + + GST +P +S PK + +E + T P +
Sbjct: 173 SYVAESSTAEDALSIRSEMIQRKGSTFRPHDSFPKSGKSGRRRRERRSTVLGLPQHVQKE 232
Query: 269 VPKRPKLPAPTRTPATAPVPARAQGAVTGKPRG 301
+ R + AP A A V G+PRG
Sbjct: 233 LGLRNEREAPGTPRAPGARDAVRIPTVDGRPRG 265
>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
Length = 1460
Score = 43.1 bits (100), Expect = 8e-04
Identities = 76/330 (23%), Positives = 124/330 (37%), Gaps = 59/330 (17%)
Query: 235 TSKPQESPKGKRKLDLNQEEKKTPSKPPA-----QLSPSVPK-------RPKLPAPTRTP 282
TS+P+E K LD + TP KP + LS +V K RP LP
Sbjct: 260 TSQPEE--KKDVSLDSDAAGPPTPCKPSSPGADSSLSSAVGKGRQGSGARPGLPEKEENE 317
Query: 283 ATAPVPARAQGAVTGKPRGEGTEPRRP--RAGPEELGKILQGVVVVLSGFQNPFRSEL-- 338
+ P R VT K G+EP + + PE+ V +G + R E
Sbjct: 318 KSEPKICR--NLVTPKADPTGSEPAKASEKEAPED---------TVDAGEEGSRREEAAK 366
Query: 339 ----RDKALELGAKYRPDWTRDSTH-----LICAFANTPKYSQVLGLGGRIVRKEWVLDC 389
+ ALE G+ S H L + A+ PK L G R E +LD
Sbjct: 367 EPKKKASALEEGSSDASQELEISEHMKEPQLSDSIASDPKSFHGLDFGFRSRISEHLLDV 426
Query: 390 HRMRRRLPSQRYLMAGPGSSSEEDEASHSGGSGDEAPKLPQKQPQTKTKPTQAAGPSSPQ 449
+ L P ++D++ S Q + + Q+ G
Sbjct: 427 DVLSPVLGGACRQAQQPLGIEDKDDSQSS---------------QDELQSKQSKGLEERL 471
Query: 450 KPPTPEETKAASP---VLQEDIDIEGVQSEGQDNGAEDSGDTED---ELRRVAEQKEHRL 503
PP P E +A SP + E+ +G + + + AE+ G+ L+ ++++
Sbjct: 472 SPPLPHEERAQSPPRSLATEEEPPQGPEGQPEWKEAEELGEDSAASLSLQLSLQREQAPS 531
Query: 504 PPGQEENGEDPYAGSTDENTDSEEHQEPPD 533
PP E G++ ++ + + EE ++P +
Sbjct: 532 PPAACEKGKEQHSQAEELGPGQEEAEDPEE 561
Score = 35.8 bits (81), Expect = 0.12
Identities = 34/148 (22%), Positives = 56/148 (37%), Gaps = 22/148 (14%)
Query: 404 AGPGSSSEEDEASHSGGSGDEA-PKLPQKQPQTKTKPTQAAGPSSPQKPPTPEETKAASP 462
+ PG+ S A G G A P LP+K+ K++P +P+ PT E AS
Sbjct: 285 SSPGADSSLSSAVGKGRQGSGARPGLPEKEENEKSEPKICRNLVTPKADPTGSEPAKAS- 343
Query: 463 VLQEDIDIEGVQSEGQDNGAEDSGDTEDELRRVAEQKEHRLPPGQEENGEDPYAGSTDEN 522
+ ED+ D +E R ++E P ++ + + + +
Sbjct: 344 ---------------EKEAPEDTVDAGEEGSR---REEAAKEPKKKASALEEGSSDASQE 385
Query: 523 TDSEEHQEPPDL--PVPELPDFFQGKHF 548
+ EH + P L + P F G F
Sbjct: 386 LEISEHMKEPQLSDSIASDPKSFHGLDF 413
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 42.7 bits (99), Expect = 0.001
Identities = 72/323 (22%), Positives = 101/323 (31%), Gaps = 66/323 (20%)
Query: 186 RPGALFFSRINKTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGK 245
R G + + +P + +G A + +S +SP RA G+T + P G+
Sbjct: 76 RAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSP-GRASGTT---RPGPLGQ 131
Query: 246 RKLDLNQEEKKTPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTE 305
+ L ++ EE K + PKR L A R + P P A+ + R GTE
Sbjct: 132 KGLRISAEETVARGK-----ATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTE 186
Query: 306 PRRPRAGPE-----------------------ELGKILQGVVVVLSGFQNPFRSELRDKA 342
PR P E + G Q P L A
Sbjct: 187 VGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSA 246
Query: 343 LELGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSQRYL 402
L + R + T A + PK + L R + P ++
Sbjct: 247 TPLSSPARSGPSARGTPRAPAHPSQPKPKGLQAL--------------RPPQVTPPRKDA 292
Query: 403 --MAGPGSSSEEDEASHSGGSGDEAP------------------KLPQKQPQTKTKPTQA 442
GP SSS S S +AP LP P P+
Sbjct: 293 APALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQ 352
Query: 443 AGPSSPQKPPTPEETKAASPVLQ 465
PS P PP+ T SP LQ
Sbjct: 353 TLPSPPATPPSQATTSLGSPTLQ 375
Score = 37.4 bits (85), Expect = 0.042
Identities = 27/102 (26%), Positives = 37/102 (36%), Gaps = 5/102 (4%)
Query: 199 SPVTASDPAGPSYAAA-TLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKT 257
SP+ P P+ A LQA + + PV + P SP + +
Sbjct: 418 SPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPP----SQAPPS 473
Query: 258 PSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKP 299
+ PP Q+ PS P P + P AP P A KP
Sbjct: 474 LAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKP 515
Score = 36.6 bits (83), Expect = 0.072
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 6/116 (5%)
Query: 199 SPVTASDP-AGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKT 257
SP+ P A P+ A LQA + ++ P+S + P + L Q
Sbjct: 387 SPLATPPPQAPPALALPPLQAPPSPPASPPLS----PLATPSPQAPNALAVHLLQAPFSP 442
Query: 258 PSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGP 313
P PP Q S P P + +P+ TP + P+ A + P + P P A P
Sbjct: 443 PPSPPVQAPFSPPASPPV-SPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATP 497
Score = 34.3 bits (77), Expect = 0.36
Identities = 40/180 (22%), Positives = 61/180 (33%), Gaps = 19/180 (10%)
Query: 151 SPPDKDEAEAPSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDP---- 206
SPP A PSQ +V ++ + P A + + P A+ P
Sbjct: 457 SPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSA---TPPPQAPPPLAAPPLQLA 513
Query: 207 -----AGPSYAAATLQASSAASSA----SPVSRAIGSTSKPQESPKGKRKLDLNQEEKKT 257
A P+ A LQA + ++ +P S + P +P + L +
Sbjct: 514 KPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQV 573
Query: 258 PSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPEELG 317
P PPA + P+RP P P + P G P P +GP+ G
Sbjct: 574 PPSPPASPTLQAPRRPPTPGP---DTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAG 630
Score = 31.2 bits (69), Expect = 3.0
Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 7/106 (6%)
Query: 200 PVTASDPAGPSYAAATLQASSAASSASPVSR---AIGSTSKPQESPKGKRKLDLNQEEKK 256
P + P + AA + ++ A P++ IG + P+ +P+ +
Sbjct: 30 PGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRN 89
Query: 257 TPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGE 302
S+PPA S + P PA +P P RA G P G+
Sbjct: 90 PASRPPA--SGRGERAP--PAKNTSPGPVSSPGRASGTTRPGPLGQ 131
>gi|71043876 undifferentiated embryonic cell transcription factor 1
[Homo sapiens]
Length = 341
Score = 42.7 bits (99), Expect = 0.001
Identities = 58/216 (26%), Positives = 78/216 (36%), Gaps = 25/216 (11%)
Query: 258 PSKPPAQLSPSVPKRPKLPAPT-RTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPEEL 316
P +PP L+P P P P P RTP AP GT PRRP A P L
Sbjct: 5 PRRPPP-LAPPAPPSPASPDPEPRTPGDAP----------------GTPPRRP-ASPSAL 46
Query: 317 GKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTRDSTHLICAFANTPKYSQVLGL 376
G++ G+ V Q S R+ L LG +P R L+ P Y +V
Sbjct: 47 GEL--GLPVSPGSAQRTPWSA-RETELLLGTLLQPAVWR--ALLLDRRQALPTYRRVSAA 101
Query: 377 GGRIVRKEWVLDCHRMRRRLPSQ-RYLMAGPGSSSEEDEASHSGGSGDEAPKLPQKQPQT 435
+ + C R + L + R P +E G GD K P+++
Sbjct: 102 LAQQQVRRTPAQCRRRYKFLKDKFREAHGQPPGPFDEQIRKLMGLLGDNGRKRPRRRSPG 161
Query: 436 KTKPTQAAGPSSPQKPPTPEETKAASPVLQEDIDIE 471
+P +A P P P E A D D +
Sbjct: 162 SGRPQRARRPVPNAHAPAPSEPDATPLPTARDRDAD 197
>gi|5032033 RNA binding motif protein 6 [Homo sapiens]
Length = 1123
Score = 42.4 bits (98), Expect = 0.001
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 33/230 (14%)
Query: 323 VVVVLSGFQNPFRSELRDKALELGA-KYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIV 381
VV +L PF + + A+ L K R D S H+ + KY + GGR
Sbjct: 715 VVKILQNLDPPFSIDGKMVAVNLATGKRRNDSGDHSDHM--HYYQGKKYFRDRRGGGR-- 770
Query: 382 RKEWVLDCHRMRRRLPSQRYLMAG-------PGSSSEEDEASHSGGSGDEAPKLPQKQPQ 434
+W D +R ++ S Y+ P + + D + + P LP+++
Sbjct: 771 NSDWSSDTNRQGQQSSSDCYIYDSATGYYYDPLAGTYYDPNTQQEVYVPQDPGLPEEEEI 830
Query: 435 TKTKPTQAAGPSSPQKPPTPEETKAASPVLQEDIDIEGVQSEGQDNGAEDSGDTEDELRR 494
+ KPT + G SS +K + + K GV + Q+N +E ED ++
Sbjct: 831 KEKKPT-SQGKSSSKKEMSKRDGKEKKD--------RGV-TRFQENASEGKAPAEDVFKK 880
Query: 495 VAE---QKEHRLPPGQEEN------GEDPYAGSTDENTDSEEHQEPPDLP 535
+KE PP + N GE Y G +D + EE Q PP P
Sbjct: 881 PLPPTVKKEESPPPPKVVNPLIGLLGE--YGGDSDYEEEEEEEQTPPPQP 928
>gi|188219563 hypothetical protein LOC126731 [Homo sapiens]
Length = 270
Score = 42.4 bits (98), Expect = 0.001
Identities = 38/139 (27%), Positives = 56/139 (40%), Gaps = 26/139 (18%)
Query: 390 HRMRRRLPSQRYLMA-----GPGSSSEEDEASHSGGSGDEAPKLPQKQPQTKTKPTQAAG 444
+R+ RRL Q + GP SSE+ +S S G+G AP+
Sbjct: 33 YRLGRRLLEQAHAPWLWDDWGPAGSSEDSASSESSGAGGPAPR------------CAPPS 80
Query: 445 PSSPQKPPTPEETKAASPVLQEDIDIEGVQSEGQDNGAEDSG-------DTEDELRRVAE 497
P P +P T EE + + E+ D E +E +D AED+ D ED+ +
Sbjct: 81 PPPPVEPATQEEAERRARGAPEEQDAEAGDAEAED--AEDAALPALPVKDVEDKPEQQTR 138
Query: 498 QKEHRLPPGQEENGEDPYA 516
+E P E + P A
Sbjct: 139 TRETDKSPTSTEPRQQPSA 157
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 42.0 bits (97), Expect = 0.002
Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 8/122 (6%)
Query: 199 SPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKTP 258
SP T +PA T A + +P + T+ + SP ++ ++ P
Sbjct: 381 SPTTPKEPA----PTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 436
Query: 259 SKP--PAQLSPS--VPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPE 314
+ P PA +P P PK PAPT T AP + T K T + PE
Sbjct: 437 TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 496
Query: 315 EL 316
+L
Sbjct: 497 KL 498
Score = 41.6 bits (96), Expect = 0.002
Identities = 33/125 (26%), Positives = 47/125 (37%), Gaps = 9/125 (7%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQE----SPKGKRKLDLNQ 252
K++P T +PA T A + SP + + + P+E +PK +
Sbjct: 394 KSAPTTTKEPA----PTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE 449
Query: 253 EEKKTPSKP-PAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRA 311
TP +P P P PK PAPT TAP + T + T +
Sbjct: 450 PAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPT 509
Query: 312 GPEEL 316
PEEL
Sbjct: 510 TPEEL 514
Score = 39.3 bits (90), Expect = 0.011
Identities = 39/159 (24%), Positives = 57/159 (35%), Gaps = 12/159 (7%)
Query: 152 PPDKDEAEAPSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPSY 211
PP+ D ++ S +TV K KE + S K +A +
Sbjct: 131 PPNSDTSKETS--LTVNKETTVETKETTTTNKQT-------STDGKEKTTSAKETQSIEK 181
Query: 212 AAATLQASSAASSASPVSRAIGSTSKPQ-ESPKGKRKLDLNQEEKKTPSKPPAQLSPSVP 270
+A A ++ A P +A +T P +PK + TP +P S P
Sbjct: 182 TSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAP 241
Query: 271 KRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRP 309
PK PAPT T + P T +P T P+ P
Sbjct: 242 TTPKEPAPTTTKSAPTTPKEPAPTTTKEP--APTTPKEP 278
Score = 38.1 bits (87), Expect = 0.025
Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 23/139 (16%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKK 256
K +P T +PA + + +P A + KP +P +L E+
Sbjct: 465 KPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKP--APTTPEELAPTTPEEP 522
Query: 257 TPSKP--PAQLSP--SVPKRPKLPAPTRTPATAPVPARAQGAVTGK------PRGEG--- 303
TP+ P PA +P + P PK PAPT AP + T K P+G
Sbjct: 523 TPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTT 582
Query: 304 ------TEPRRPRAGPEEL 316
T P++P P+EL
Sbjct: 583 LKEPAPTTPKKP--APKEL 599
Score = 36.6 bits (83), Expect = 0.072
Identities = 33/138 (23%), Positives = 49/138 (35%), Gaps = 14/138 (10%)
Query: 178 EDESANSLRPGALFFSRINKTSPVTASDPA-----GPSYAAATLQASSAASSASPVSRAI 232
E SA L P + ++ + T PA P+ AS+ +P +
Sbjct: 180 EKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKS 239
Query: 233 GSTSKPQESPKGKRKLDLNQEEKKTPSKP-PAQLSPSVPKRPKLPAPTRTPATAPVPARA 291
T+ + +P + TP +P P P PK PAPT T P P
Sbjct: 240 APTTPKEPAPT------TTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTT--KEPAPTTT 291
Query: 292 QGAVTGKPRGEGTEPRRP 309
+ A T T P++P
Sbjct: 292 KSAPTTPKEPAPTTPKKP 309
Score = 36.6 bits (83), Expect = 0.072
Identities = 28/118 (23%), Positives = 42/118 (35%), Gaps = 2/118 (1%)
Query: 199 SPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQES-PKGKRKLDLNQEEKKT 257
+P T +PA P+ ++ ++ +P A + KP + PK + T
Sbjct: 271 APTTPKEPA-PTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTT 329
Query: 258 PSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPEE 315
P +P P PK PAPT AP + T K T P+E
Sbjct: 330 PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKE 387
Score = 36.6 bits (83), Expect = 0.072
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 5/113 (4%)
Query: 199 SPVTASDPA--GPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKK 256
+P T +PA P A T A ++ P A +T +P + + +
Sbjct: 341 APTTPKEPAPTAPKKPAPTTPKEPAPTT--PKEPAPTTTKEPSPTTPKEPAPTTTKSAPT 398
Query: 257 TPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRP 309
T +P + S P PK P+PT T AP + T K + T P+ P
Sbjct: 399 TTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPK-KPAPTTPKEP 450
Score = 34.3 bits (77), Expect = 0.36
Identities = 19/58 (32%), Positives = 22/58 (37%)
Query: 257 TPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPE 314
TP +P + S P PK PAPT T AP + T K T P E
Sbjct: 243 TPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKE 300
Score = 33.9 bits (76), Expect = 0.47
Identities = 40/183 (21%), Positives = 62/183 (33%), Gaps = 40/183 (21%)
Query: 155 KDEAEAPSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPSYAAA 214
K+ A +K+T T + ++ A + P L + + +P T +PA + AA
Sbjct: 480 KETAPTTPKKLTPTTPEKLAPTTPEKPAPTT-PEELAPTTPEEPTPTTPEEPAPTTPKAA 538
Query: 215 TLQASSAASSASPVSRAIGSTSKPQES---------PKGKRKLDLNQEEKKTPSKP-PAQ 264
+ +P A + +P + PKG L + TP KP P +
Sbjct: 539 APNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKE 598
Query: 265 LSPSV-----------------------------PKRPKLPAPTRTPATAPVPARAQGAV 295
L+P+ P PK PAPT TAP +
Sbjct: 599 LAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPT 658
Query: 296 TGK 298
T K
Sbjct: 659 TPK 661
Score = 33.9 bits (76), Expect = 0.47
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 8/96 (8%)
Query: 198 TSPVTASDPAG--PSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEK 255
T+P T +PA P A T +A ++ + P+E K +
Sbjct: 623 TAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSD 682
Query: 256 KTPSKPPAQLSPSVPKR-----PKLPAPTRTPATAP 286
K P + +P+ PK PK PAPT TP T P
Sbjct: 683 KPAPTTPKETAPTTPKEPAPTTPKKPAPT-TPETPP 717
Score = 33.5 bits (75), Expect = 0.61
Identities = 32/128 (25%), Positives = 44/128 (34%), Gaps = 16/128 (12%)
Query: 199 SPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQE----SPKG------KRKL 248
+P T +PA T A + +P + + + P+E +PK K
Sbjct: 279 APTTTKEPA----PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA 334
Query: 249 DLNQEEKKTPSKPPAQLSPS--VPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEP 306
+E T K PA +P P PK PAPT AP + T K T
Sbjct: 335 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTK 394
Query: 307 RRPRAGPE 314
P E
Sbjct: 395 SAPTTTKE 402
Score = 31.6 bits (70), Expect = 2.3
Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 16/120 (13%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKK 256
K +P T +PA + T + +P ++ T+ + +P +K
Sbjct: 308 KPAPTTPKEPAPTTPKEPT---PTTPKEPAPTTKEPAPTTPKEPAPTAPKK------PAP 358
Query: 257 TPSKPPAQLSPS--VPKRPKLPAPTRTPATAPVPARAQGAVTGKP-----RGEGTEPRRP 309
T K PA +P P K P+PT AP ++ T +P + T P+ P
Sbjct: 359 TTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 418
Score = 31.6 bits (70), Expect = 2.3
Identities = 40/169 (23%), Positives = 58/169 (34%), Gaps = 30/169 (17%)
Query: 166 TVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAG--PSYAAATLQASSAAS 223
T TK KE + P + + SP T +PA P A T A +
Sbjct: 391 TTTKSAPTTTKEPAPTTTKSAP-----TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPT 445
Query: 224 S------ASPVSRAIGSTSKPQES-PKGKRKLDLNQEEKKTPSK----PPAQLSPSVPKR 272
+ +P A +T KP + PK + TP K P +L+P+ P++
Sbjct: 446 TPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEK 505
Query: 273 PKLPA-----------PTRTPATAPVPARAQGAVTGKPRGEG-TEPRRP 309
P PT T P P + A P+ T P+ P
Sbjct: 506 PAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEP 554
Score = 31.6 bits (70), Expect = 2.3
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 211 YAAATLQASSAASSASPVSRAIGST---SKPQESPKGKRKLDLN-------QEEKKTPSK 260
+ TL+ ++ A + + I +T +KP+E+ K K + + Q+ K P K
Sbjct: 837 FKITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKPTKAPKK 896
Query: 261 PPAQLSPSVPKRPKLPAPTRTPATAPVPAR 290
P + K+PK R P T P P +
Sbjct: 897 PTS------TKKPKTMPRVRKPKTTPTPRK 920
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 42.0 bits (97), Expect = 0.002
Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 8/122 (6%)
Query: 199 SPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKTP 258
SP T +PA T A + +P + T+ + SP ++ ++ P
Sbjct: 422 SPTTPKEPA----PTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 477
Query: 259 SKP--PAQLSPS--VPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPE 314
+ P PA +P P PK PAPT T AP + T K T + PE
Sbjct: 478 TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 537
Query: 315 EL 316
+L
Sbjct: 538 KL 539
Score = 41.6 bits (96), Expect = 0.002
Identities = 33/125 (26%), Positives = 47/125 (37%), Gaps = 9/125 (7%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQE----SPKGKRKLDLNQ 252
K++P T +PA T A + SP + + + P+E +PK +
Sbjct: 435 KSAPTTTKEPA----PTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE 490
Query: 253 EEKKTPSKP-PAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRA 311
TP +P P P PK PAPT TAP + T + T +
Sbjct: 491 PAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPT 550
Query: 312 GPEEL 316
PEEL
Sbjct: 551 TPEEL 555
Score = 39.3 bits (90), Expect = 0.011
Identities = 39/159 (24%), Positives = 57/159 (35%), Gaps = 12/159 (7%)
Query: 152 PPDKDEAEAPSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPSY 211
PP+ D ++ S +TV K KE + S K +A +
Sbjct: 172 PPNSDTSKETS--LTVNKETTVETKETTTTNKQT-------STDGKEKTTSAKETQSIEK 222
Query: 212 AAATLQASSAASSASPVSRAIGSTSKPQ-ESPKGKRKLDLNQEEKKTPSKPPAQLSPSVP 270
+A A ++ A P +A +T P +PK + TP +P S P
Sbjct: 223 TSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAP 282
Query: 271 KRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRP 309
PK PAPT T + P T +P T P+ P
Sbjct: 283 TTPKEPAPTTTKSAPTTPKEPAPTTTKEP--APTTPKEP 319
Score = 38.1 bits (87), Expect = 0.025
Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 23/139 (16%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKK 256
K +P T +PA + + +P A + KP +P +L E+
Sbjct: 506 KPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKP--APTTPEELAPTTPEEP 563
Query: 257 TPSKP--PAQLSP--SVPKRPKLPAPTRTPATAPVPARAQGAVTGK------PRGEG--- 303
TP+ P PA +P + P PK PAPT AP + T K P+G
Sbjct: 564 TPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTT 623
Query: 304 ------TEPRRPRAGPEEL 316
T P++P P+EL
Sbjct: 624 LKEPAPTTPKKP--APKEL 640
Score = 36.6 bits (83), Expect = 0.072
Identities = 33/138 (23%), Positives = 49/138 (35%), Gaps = 14/138 (10%)
Query: 178 EDESANSLRPGALFFSRINKTSPVTASDPA-----GPSYAAATLQASSAASSASPVSRAI 232
E SA L P + ++ + T PA P+ AS+ +P +
Sbjct: 221 EKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKS 280
Query: 233 GSTSKPQESPKGKRKLDLNQEEKKTPSKP-PAQLSPSVPKRPKLPAPTRTPATAPVPARA 291
T+ + +P + TP +P P P PK PAPT T P P
Sbjct: 281 APTTPKEPAPT------TTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTT--KEPAPTTT 332
Query: 292 QGAVTGKPRGEGTEPRRP 309
+ A T T P++P
Sbjct: 333 KSAPTTPKEPAPTTPKKP 350
Score = 36.6 bits (83), Expect = 0.072
Identities = 28/118 (23%), Positives = 42/118 (35%), Gaps = 2/118 (1%)
Query: 199 SPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQES-PKGKRKLDLNQEEKKT 257
+P T +PA P+ ++ ++ +P A + KP + PK + T
Sbjct: 312 APTTPKEPA-PTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTT 370
Query: 258 PSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPEE 315
P +P P PK PAPT AP + T K T P+E
Sbjct: 371 PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKE 428
Score = 36.6 bits (83), Expect = 0.072
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 5/113 (4%)
Query: 199 SPVTASDPA--GPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKK 256
+P T +PA P A T A ++ P A +T +P + + +
Sbjct: 382 APTTPKEPAPTAPKKPAPTTPKEPAPTT--PKEPAPTTTKEPSPTTPKEPAPTTTKSAPT 439
Query: 257 TPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRP 309
T +P + S P PK P+PT T AP + T K + T P+ P
Sbjct: 440 TTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPK-KPAPTTPKEP 491
Score = 34.3 bits (77), Expect = 0.36
Identities = 19/58 (32%), Positives = 22/58 (37%)
Query: 257 TPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPE 314
TP +P + S P PK PAPT T AP + T K T P E
Sbjct: 284 TPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKE 341
Score = 33.9 bits (76), Expect = 0.47
Identities = 40/183 (21%), Positives = 62/183 (33%), Gaps = 40/183 (21%)
Query: 155 KDEAEAPSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPSYAAA 214
K+ A +K+T T + ++ A + P L + + +P T +PA + AA
Sbjct: 521 KETAPTTPKKLTPTTPEKLAPTTPEKPAPTT-PEELAPTTPEEPTPTTPEEPAPTTPKAA 579
Query: 215 TLQASSAASSASPVSRAIGSTSKPQES---------PKGKRKLDLNQEEKKTPSKP-PAQ 264
+ +P A + +P + PKG L + TP KP P +
Sbjct: 580 APNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKE 639
Query: 265 LSPSV-----------------------------PKRPKLPAPTRTPATAPVPARAQGAV 295
L+P+ P PK PAPT TAP +
Sbjct: 640 LAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPT 699
Query: 296 TGK 298
T K
Sbjct: 700 TPK 702
Score = 33.9 bits (76), Expect = 0.47
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 8/96 (8%)
Query: 198 TSPVTASDPAG--PSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEK 255
T+P T +PA P A T +A ++ + P+E K +
Sbjct: 664 TAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSD 723
Query: 256 KTPSKPPAQLSPSVPKR-----PKLPAPTRTPATAP 286
K P + +P+ PK PK PAPT TP T P
Sbjct: 724 KPAPTTPKETAPTTPKEPAPTTPKKPAPT-TPETPP 758
Score = 33.5 bits (75), Expect = 0.61
Identities = 32/128 (25%), Positives = 44/128 (34%), Gaps = 16/128 (12%)
Query: 199 SPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQE----SPKG------KRKL 248
+P T +PA T A + +P + + + P+E +PK K
Sbjct: 320 APTTTKEPA----PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA 375
Query: 249 DLNQEEKKTPSKPPAQLSPS--VPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEP 306
+E T K PA +P P PK PAPT AP + T K T
Sbjct: 376 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTK 435
Query: 307 RRPRAGPE 314
P E
Sbjct: 436 SAPTTTKE 443
Score = 31.6 bits (70), Expect = 2.3
Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 16/120 (13%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKK 256
K +P T +PA + T + +P ++ T+ + +P +K
Sbjct: 349 KPAPTTPKEPAPTTPKEPT---PTTPKEPAPTTKEPAPTTPKEPAPTAPKK------PAP 399
Query: 257 TPSKPPAQLSPS--VPKRPKLPAPTRTPATAPVPARAQGAVTGKP-----RGEGTEPRRP 309
T K PA +P P K P+PT AP ++ T +P + T P+ P
Sbjct: 400 TTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 459
Score = 31.6 bits (70), Expect = 2.3
Identities = 40/169 (23%), Positives = 58/169 (34%), Gaps = 30/169 (17%)
Query: 166 TVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAG--PSYAAATLQASSAAS 223
T TK KE + P + + SP T +PA P A T A +
Sbjct: 432 TTTKSAPTTTKEPAPTTTKSAP-----TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPT 486
Query: 224 S------ASPVSRAIGSTSKPQES-PKGKRKLDLNQEEKKTPSK----PPAQLSPSVPKR 272
+ +P A +T KP + PK + TP K P +L+P+ P++
Sbjct: 487 TPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEK 546
Query: 273 PKLPA-----------PTRTPATAPVPARAQGAVTGKPRGEG-TEPRRP 309
P PT T P P + A P+ T P+ P
Sbjct: 547 PAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEP 595
Score = 31.6 bits (70), Expect = 2.3
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 211 YAAATLQASSAASSASPVSRAIGST---SKPQESPKGKRKLDLN-------QEEKKTPSK 260
+ TL+ ++ A + + I +T +KP+E+ K K + + Q+ K P K
Sbjct: 878 FKITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKPTKAPKK 937
Query: 261 PPAQLSPSVPKRPKLPAPTRTPATAPVPAR 290
P + K+PK R P T P P +
Sbjct: 938 PTS------TKKPKTMPRVRKPKTTPTPRK 961
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 42.0 bits (97), Expect = 0.002
Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 8/122 (6%)
Query: 199 SPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKTP 258
SP T +PA T A + +P + T+ + SP ++ ++ P
Sbjct: 474 SPTTPKEPA----PTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 529
Query: 259 SKP--PAQLSPS--VPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPE 314
+ P PA +P P PK PAPT T AP + T K T + PE
Sbjct: 530 TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 589
Query: 315 EL 316
+L
Sbjct: 590 KL 591
Score = 41.6 bits (96), Expect = 0.002
Identities = 33/125 (26%), Positives = 47/125 (37%), Gaps = 9/125 (7%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQE----SPKGKRKLDLNQ 252
K++P T +PA T A + SP + + + P+E +PK +
Sbjct: 487 KSAPTTTKEPA----PTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE 542
Query: 253 EEKKTPSKP-PAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRA 311
TP +P P P PK PAPT TAP + T + T +
Sbjct: 543 PAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPT 602
Query: 312 GPEEL 316
PEEL
Sbjct: 603 TPEEL 607
Score = 39.3 bits (90), Expect = 0.011
Identities = 39/159 (24%), Positives = 57/159 (35%), Gaps = 12/159 (7%)
Query: 152 PPDKDEAEAPSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPSY 211
PP+ D ++ S +TV K KE + S K +A +
Sbjct: 224 PPNSDTSKETS--LTVNKETTVETKETTTTNKQT-------STDGKEKTTSAKETQSIEK 274
Query: 212 AAATLQASSAASSASPVSRAIGSTSKPQ-ESPKGKRKLDLNQEEKKTPSKPPAQLSPSVP 270
+A A ++ A P +A +T P +PK + TP +P S P
Sbjct: 275 TSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAP 334
Query: 271 KRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRP 309
PK PAPT T + P T +P T P+ P
Sbjct: 335 TTPKEPAPTTTKSAPTTPKEPAPTTTKEP--APTTPKEP 371
Score = 38.1 bits (87), Expect = 0.025
Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 23/139 (16%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKK 256
K +P T +PA + + +P A + KP +P +L E+
Sbjct: 558 KPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKP--APTTPEELAPTTPEEP 615
Query: 257 TPSKP--PAQLSP--SVPKRPKLPAPTRTPATAPVPARAQGAVTGK------PRGEG--- 303
TP+ P PA +P + P PK PAPT AP + T K P+G
Sbjct: 616 TPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTT 675
Query: 304 ------TEPRRPRAGPEEL 316
T P++P P+EL
Sbjct: 676 LKEPAPTTPKKP--APKEL 692
Score = 36.6 bits (83), Expect = 0.072
Identities = 33/138 (23%), Positives = 49/138 (35%), Gaps = 14/138 (10%)
Query: 178 EDESANSLRPGALFFSRINKTSPVTASDPA-----GPSYAAATLQASSAASSASPVSRAI 232
E SA L P + ++ + T PA P+ AS+ +P +
Sbjct: 273 EKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKS 332
Query: 233 GSTSKPQESPKGKRKLDLNQEEKKTPSKP-PAQLSPSVPKRPKLPAPTRTPATAPVPARA 291
T+ + +P + TP +P P P PK PAPT T P P
Sbjct: 333 APTTPKEPAPT------TTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTT--KEPAPTTT 384
Query: 292 QGAVTGKPRGEGTEPRRP 309
+ A T T P++P
Sbjct: 385 KSAPTTPKEPAPTTPKKP 402
Score = 36.6 bits (83), Expect = 0.072
Identities = 28/118 (23%), Positives = 42/118 (35%), Gaps = 2/118 (1%)
Query: 199 SPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQES-PKGKRKLDLNQEEKKT 257
+P T +PA P+ ++ ++ +P A + KP + PK + T
Sbjct: 364 APTTPKEPA-PTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTT 422
Query: 258 PSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPEE 315
P +P P PK PAPT AP + T K T P+E
Sbjct: 423 PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKE 480
Score = 36.6 bits (83), Expect = 0.072
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 5/113 (4%)
Query: 199 SPVTASDPA--GPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKK 256
+P T +PA P A T A ++ P A +T +P + + +
Sbjct: 434 APTTPKEPAPTAPKKPAPTTPKEPAPTT--PKEPAPTTTKEPSPTTPKEPAPTTTKSAPT 491
Query: 257 TPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRP 309
T +P + S P PK P+PT T AP + T K + T P+ P
Sbjct: 492 TTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPK-KPAPTTPKEP 543
Score = 34.3 bits (77), Expect = 0.36
Identities = 19/58 (32%), Positives = 22/58 (37%)
Query: 257 TPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPE 314
TP +P + S P PK PAPT T AP + T K T P E
Sbjct: 336 TPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKE 393
Score = 33.9 bits (76), Expect = 0.47
Identities = 40/183 (21%), Positives = 62/183 (33%), Gaps = 40/183 (21%)
Query: 155 KDEAEAPSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPSYAAA 214
K+ A +K+T T + ++ A + P L + + +P T +PA + AA
Sbjct: 573 KETAPTTPKKLTPTTPEKLAPTTPEKPAPTT-PEELAPTTPEEPTPTTPEEPAPTTPKAA 631
Query: 215 TLQASSAASSASPVSRAIGSTSKPQES---------PKGKRKLDLNQEEKKTPSKP-PAQ 264
+ +P A + +P + PKG L + TP KP P +
Sbjct: 632 APNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKE 691
Query: 265 LSPSV-----------------------------PKRPKLPAPTRTPATAPVPARAQGAV 295
L+P+ P PK PAPT TAP +
Sbjct: 692 LAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPT 751
Query: 296 TGK 298
T K
Sbjct: 752 TPK 754
Score = 33.9 bits (76), Expect = 0.47
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 8/96 (8%)
Query: 198 TSPVTASDPAG--PSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEK 255
T+P T +PA P A T +A ++ + P+E K +
Sbjct: 716 TAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSD 775
Query: 256 KTPSKPPAQLSPSVPKR-----PKLPAPTRTPATAP 286
K P + +P+ PK PK PAPT TP T P
Sbjct: 776 KPAPTTPKETAPTTPKEPAPTTPKKPAPT-TPETPP 810
Score = 33.5 bits (75), Expect = 0.61
Identities = 32/128 (25%), Positives = 44/128 (34%), Gaps = 16/128 (12%)
Query: 199 SPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQE----SPKG------KRKL 248
+P T +PA T A + +P + + + P+E +PK K
Sbjct: 372 APTTTKEPA----PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA 427
Query: 249 DLNQEEKKTPSKPPAQLSPS--VPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEP 306
+E T K PA +P P PK PAPT AP + T K T
Sbjct: 428 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTK 487
Query: 307 RRPRAGPE 314
P E
Sbjct: 488 SAPTTTKE 495
Score = 31.6 bits (70), Expect = 2.3
Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 16/120 (13%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKK 256
K +P T +PA + T + +P ++ T+ + +P +K
Sbjct: 401 KPAPTTPKEPAPTTPKEPT---PTTPKEPAPTTKEPAPTTPKEPAPTAPKK------PAP 451
Query: 257 TPSKPPAQLSPS--VPKRPKLPAPTRTPATAPVPARAQGAVTGKP-----RGEGTEPRRP 309
T K PA +P P K P+PT AP ++ T +P + T P+ P
Sbjct: 452 TTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 511
Score = 31.6 bits (70), Expect = 2.3
Identities = 40/169 (23%), Positives = 58/169 (34%), Gaps = 30/169 (17%)
Query: 166 TVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAG--PSYAAATLQASSAAS 223
T TK KE + P + + SP T +PA P A T A +
Sbjct: 484 TTTKSAPTTTKEPAPTTTKSAP-----TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPT 538
Query: 224 S------ASPVSRAIGSTSKPQES-PKGKRKLDLNQEEKKTPSK----PPAQLSPSVPKR 272
+ +P A +T KP + PK + TP K P +L+P+ P++
Sbjct: 539 TPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEK 598
Query: 273 PKLPA-----------PTRTPATAPVPARAQGAVTGKPRGEG-TEPRRP 309
P PT T P P + A P+ T P+ P
Sbjct: 599 PAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEP 647
Score = 31.6 bits (70), Expect = 2.3
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 211 YAAATLQASSAASSASPVSRAIGST---SKPQESPKGKRKLDLN-------QEEKKTPSK 260
+ TL+ ++ A + + I +T +KP+E+ K K + + Q+ K P K
Sbjct: 930 FKITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKPTKAPKK 989
Query: 261 PPAQLSPSVPKRPKLPAPTRTPATAPVPAR 290
P + K+PK R P T P P +
Sbjct: 990 PTS------TKKPKTMPRVRKPKTTPTPRK 1013
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 42.0 bits (97), Expect = 0.002
Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 8/122 (6%)
Query: 199 SPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKTP 258
SP T +PA T A + +P + T+ + SP ++ ++ P
Sbjct: 515 SPTTPKEPA----PTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 570
Query: 259 SKP--PAQLSPS--VPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPE 314
+ P PA +P P PK PAPT T AP + T K T + PE
Sbjct: 571 TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPE 630
Query: 315 EL 316
+L
Sbjct: 631 KL 632
Score = 41.6 bits (96), Expect = 0.002
Identities = 33/125 (26%), Positives = 47/125 (37%), Gaps = 9/125 (7%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQE----SPKGKRKLDLNQ 252
K++P T +PA T A + SP + + + P+E +PK +
Sbjct: 528 KSAPTTTKEPA----PTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE 583
Query: 253 EEKKTPSKP-PAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRA 311
TP +P P P PK PAPT TAP + T + T +
Sbjct: 584 PAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPT 643
Query: 312 GPEEL 316
PEEL
Sbjct: 644 TPEEL 648
Score = 39.3 bits (90), Expect = 0.011
Identities = 39/159 (24%), Positives = 57/159 (35%), Gaps = 12/159 (7%)
Query: 152 PPDKDEAEAPSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPSY 211
PP+ D ++ S +TV K KE + S K +A +
Sbjct: 265 PPNSDTSKETS--LTVNKETTVETKETTTTNKQT-------STDGKEKTTSAKETQSIEK 315
Query: 212 AAATLQASSAASSASPVSRAIGSTSKPQ-ESPKGKRKLDLNQEEKKTPSKPPAQLSPSVP 270
+A A ++ A P +A +T P +PK + TP +P S P
Sbjct: 316 TSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAP 375
Query: 271 KRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRP 309
PK PAPT T + P T +P T P+ P
Sbjct: 376 TTPKEPAPTTTKSAPTTPKEPAPTTTKEP--APTTPKEP 412
Score = 38.1 bits (87), Expect = 0.025
Identities = 37/139 (26%), Positives = 54/139 (38%), Gaps = 23/139 (16%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKK 256
K +P T +PA + + +P A + KP +P +L E+
Sbjct: 599 KPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKP--APTTPEELAPTTPEEP 656
Query: 257 TPSKP--PAQLSP--SVPKRPKLPAPTRTPATAPVPARAQGAVTGK------PRGEG--- 303
TP+ P PA +P + P PK PAPT AP + T K P+G
Sbjct: 657 TPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTT 716
Query: 304 ------TEPRRPRAGPEEL 316
T P++P P+EL
Sbjct: 717 LKEPAPTTPKKP--APKEL 733
Score = 36.6 bits (83), Expect = 0.072
Identities = 33/138 (23%), Positives = 49/138 (35%), Gaps = 14/138 (10%)
Query: 178 EDESANSLRPGALFFSRINKTSPVTASDPA-----GPSYAAATLQASSAASSASPVSRAI 232
E SA L P + ++ + T PA P+ AS+ +P +
Sbjct: 314 EKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKS 373
Query: 233 GSTSKPQESPKGKRKLDLNQEEKKTPSKP-PAQLSPSVPKRPKLPAPTRTPATAPVPARA 291
T+ + +P + TP +P P P PK PAPT T P P
Sbjct: 374 APTTPKEPAPT------TTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTT--KEPAPTTT 425
Query: 292 QGAVTGKPRGEGTEPRRP 309
+ A T T P++P
Sbjct: 426 KSAPTTPKEPAPTTPKKP 443
Score = 36.6 bits (83), Expect = 0.072
Identities = 28/118 (23%), Positives = 42/118 (35%), Gaps = 2/118 (1%)
Query: 199 SPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQES-PKGKRKLDLNQEEKKT 257
+P T +PA P+ ++ ++ +P A + KP + PK + T
Sbjct: 405 APTTPKEPA-PTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTT 463
Query: 258 PSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPEE 315
P +P P PK PAPT AP + T K T P+E
Sbjct: 464 PKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKE 521
Score = 36.6 bits (83), Expect = 0.072
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 5/113 (4%)
Query: 199 SPVTASDPA--GPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKK 256
+P T +PA P A T A ++ P A +T +P + + +
Sbjct: 475 APTTPKEPAPTAPKKPAPTTPKEPAPTT--PKEPAPTTTKEPSPTTPKEPAPTTTKSAPT 532
Query: 257 TPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRP 309
T +P + S P PK P+PT T AP + T K + T P+ P
Sbjct: 533 TTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPK-KPAPTTPKEP 584
Score = 34.3 bits (77), Expect = 0.36
Identities = 19/58 (32%), Positives = 22/58 (37%)
Query: 257 TPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPE 314
TP +P + S P PK PAPT T AP + T K T P E
Sbjct: 377 TPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKE 434
Score = 33.9 bits (76), Expect = 0.47
Identities = 40/183 (21%), Positives = 62/183 (33%), Gaps = 40/183 (21%)
Query: 155 KDEAEAPSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPSYAAA 214
K+ A +K+T T + ++ A + P L + + +P T +PA + AA
Sbjct: 614 KETAPTTPKKLTPTTPEKLAPTTPEKPAPTT-PEELAPTTPEEPTPTTPEEPAPTTPKAA 672
Query: 215 TLQASSAASSASPVSRAIGSTSKPQES---------PKGKRKLDLNQEEKKTPSKP-PAQ 264
+ +P A + +P + PKG L + TP KP P +
Sbjct: 673 APNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKE 732
Query: 265 LSPSV-----------------------------PKRPKLPAPTRTPATAPVPARAQGAV 295
L+P+ P PK PAPT TAP +
Sbjct: 733 LAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPT 792
Query: 296 TGK 298
T K
Sbjct: 793 TPK 795
Score = 33.9 bits (76), Expect = 0.47
Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 8/96 (8%)
Query: 198 TSPVTASDPAG--PSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEK 255
T+P T +PA P A T +A ++ + P+E K +
Sbjct: 757 TAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSD 816
Query: 256 KTPSKPPAQLSPSVPKR-----PKLPAPTRTPATAP 286
K P + +P+ PK PK PAPT TP T P
Sbjct: 817 KPAPTTPKETAPTTPKEPAPTTPKKPAPT-TPETPP 851
Score = 33.5 bits (75), Expect = 0.61
Identities = 32/128 (25%), Positives = 44/128 (34%), Gaps = 16/128 (12%)
Query: 199 SPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQE----SPKG------KRKL 248
+P T +PA T A + +P + + + P+E +PK K
Sbjct: 413 APTTTKEPA----PTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA 468
Query: 249 DLNQEEKKTPSKPPAQLSPS--VPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEP 306
+E T K PA +P P PK PAPT AP + T K T
Sbjct: 469 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTK 528
Query: 307 RRPRAGPE 314
P E
Sbjct: 529 SAPTTTKE 536
Score = 31.6 bits (70), Expect = 2.3
Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 16/120 (13%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKK 256
K +P T +PA + T + +P ++ T+ + +P +K
Sbjct: 442 KPAPTTPKEPAPTTPKEPT---PTTPKEPAPTTKEPAPTTPKEPAPTAPKK------PAP 492
Query: 257 TPSKPPAQLSPS--VPKRPKLPAPTRTPATAPVPARAQGAVTGKP-----RGEGTEPRRP 309
T K PA +P P K P+PT AP ++ T +P + T P+ P
Sbjct: 493 TTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP 552
Score = 31.6 bits (70), Expect = 2.3
Identities = 40/169 (23%), Positives = 58/169 (34%), Gaps = 30/169 (17%)
Query: 166 TVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAG--PSYAAATLQASSAAS 223
T TK KE + P + + SP T +PA P A T A +
Sbjct: 525 TTTKSAPTTTKEPAPTTTKSAP-----TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPT 579
Query: 224 S------ASPVSRAIGSTSKPQES-PKGKRKLDLNQEEKKTPSK----PPAQLSPSVPKR 272
+ +P A +T KP + PK + TP K P +L+P+ P++
Sbjct: 580 TPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEK 639
Query: 273 PKLPA-----------PTRTPATAPVPARAQGAVTGKPRGEG-TEPRRP 309
P PT T P P + A P+ T P+ P
Sbjct: 640 PAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEP 688
Score = 31.6 bits (70), Expect = 2.3
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 211 YAAATLQASSAASSASPVSRAIGST---SKPQESPKGKRKLDLN-------QEEKKTPSK 260
+ TL+ ++ A + + I +T +KP+E+ K K + + Q+ K P K
Sbjct: 971 FKITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKPQKPTKAPKK 1030
Query: 261 PPAQLSPSVPKRPKLPAPTRTPATAPVPAR 290
P + K+PK R P T P P +
Sbjct: 1031 PTS------TKKPKTMPRVRKPKTTPTPRK 1054
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 42.0 bits (97), Expect = 0.002
Identities = 64/301 (21%), Positives = 90/301 (29%), Gaps = 54/301 (17%)
Query: 188 GALFFSRINKTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRK 247
GA + P S P P+ + +S PVS ++ + P G++
Sbjct: 67 GATIPESAPRAGPTRTSRP--PASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKG 124
Query: 248 LDLNQEEKKTPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPR 307
L ++ EE K + PKR L A R + P P A+ + R GTE
Sbjct: 125 LRISAEETVARGK-----ATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVG 179
Query: 308 RPRAGPE-----------------------ELGKILQGVVVVLSGFQNPFRSELRDKALE 344
PR P E + G Q P L A
Sbjct: 180 LPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATP 239
Query: 345 LGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSQRYLMA 404
L + R + T A + PK + L R + P ++
Sbjct: 240 LSSPARSGPSARGTPRAPAHPSQPKPKGLQAL--------------RPPQVTPPRKDAAP 285
Query: 405 GPGSSSEEDEASHSGGSGDEAPKLPQKQPQTKTKPTQAAGPSSPQKPPTPEETKAASPVL 464
G S A+ S P P P+ PS P PP+ T SP L
Sbjct: 286 ALGPLSSSPLATPS----------PSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTL 335
Query: 465 Q 465
Q
Sbjct: 336 Q 336
Score = 37.4 bits (85), Expect = 0.042
Identities = 27/102 (26%), Positives = 37/102 (36%), Gaps = 5/102 (4%)
Query: 199 SPVTASDPAGPSYAAA-TLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKT 257
SP+ P P+ A LQA + + PV + P SP + +
Sbjct: 379 SPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPP----SQAPPS 434
Query: 258 PSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKP 299
+ PP Q+ PS P P + P AP P A KP
Sbjct: 435 LAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKP 476
Score = 36.6 bits (83), Expect = 0.072
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 6/116 (5%)
Query: 199 SPVTASDP-AGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKT 257
SP+ P A P+ A LQA + ++ P+S + P + L Q
Sbjct: 348 SPLATPPPQAPPALALPPLQAPPSPPASPPLS----PLATPSPQAPNALAVHLLQAPFSP 403
Query: 258 PSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGP 313
P PP Q S P P + +P+ TP + P+ A + P + P P A P
Sbjct: 404 PPSPPVQAPFSPPASPPV-SPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATP 458
Score = 34.3 bits (77), Expect = 0.36
Identities = 40/180 (22%), Positives = 61/180 (33%), Gaps = 19/180 (10%)
Query: 151 SPPDKDEAEAPSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDP---- 206
SPP A PSQ +V ++ + P A + + P A+ P
Sbjct: 418 SPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSA---TPPPQAPPPLAAPPLQLA 474
Query: 207 -----AGPSYAAATLQASSAASSA----SPVSRAIGSTSKPQESPKGKRKLDLNQEEKKT 257
A P+ A LQA + ++ +P S + P +P + L +
Sbjct: 475 KPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQV 534
Query: 258 PSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPEELG 317
P PPA + P+RP P P + P G P P +GP+ G
Sbjct: 535 PPSPPASPTLQAPRRPPTPGP---DTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAG 591
Score = 31.6 bits (70), Expect = 2.3
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Query: 196 NKTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEK 255
+ +P+++ +GPS A T +A + S P + + + PQ +P K D
Sbjct: 235 SSATPLSSPARSGPS-ARGTPRAPAHPSQPKP--KGLQALRPPQVTPPRK---DAAPALG 288
Query: 256 KTPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVT-GKPRGEGTEPRRP 309
S P A SPS P P P +T + P +Q + G P + T P
Sbjct: 289 PLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLP 343
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 41.6 bits (96), Expect = 0.002
Identities = 75/333 (22%), Positives = 122/333 (36%), Gaps = 37/333 (11%)
Query: 174 RVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIG 233
R ++E E L L + R + S A P+ L + SSAS +
Sbjct: 240 RERQERERQEQLEREQLEWERERRISSAAA-----PASVETPLNSVLGDSSAS--EPGLQ 292
Query: 234 STSKPQESPKGKRKLDLNQEEKKTPSKPP--AQLSPSVPKRPKLPAPTRTPATAPVPARA 291
+ S+P E+P + + P PP AQ S ++P P P P P+T P P
Sbjct: 293 AASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPP 352
Query: 292 QGAVTGK---PRGEGTEPRRPRAG-----PEELGKILQGVVVVLSGFQNPFRSELRDKAL 343
+ + P P P +G E + L G+ ++G + S + D +
Sbjct: 353 PPPLPNQVPPPPPPPPAPPLPASGFFLASMSEDNRPLTGLAAAIAGAKLRKVSRMEDTSF 412
Query: 344 ELGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSQRYLM 403
G + + +T + + L LGG + +E R RR +
Sbjct: 413 PSGG------NAIGVNSASSKTDTGRGNGPLPLGGSGLMEEMSALLARRRR--------I 458
Query: 404 AGPGSSSEEDEASHSGGSGDEAPKLPQ--KQPQTKTKPTQAAGPSSPQKPPTPEETKAAS 461
A GS+ E ++ G + P+ KP + + K P K ++
Sbjct: 459 AEKGSTIETEQKEDKGEDSEPVTSKASSTSTPEPTRKPWERTNTMNGSKSPVISRPK-ST 517
Query: 462 PVLQEDIDIEGVQSEGQDNGAEDSGDTEDELRR 494
P+ Q + GVQ+EG D D DE+R+
Sbjct: 518 PLSQPSAN--GVQTEGLDYDRLKQ-DILDEMRK 547
>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
Length = 3664
Score = 41.6 bits (96), Expect = 0.002
Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 13/132 (9%)
Query: 406 PGSSSEEDEAS-----HSGGSGDEAPKLPQKQPQTKTKPTQAAGPSSPQKPPTPEETKAA 460
PG+ +++ A G SGD+ P L K P +QA P+ P+ T+
Sbjct: 1704 PGADPDKEAAMMPAGVEEGSSGDQPPYLDAKPPTPGASFSQAESNVDPE----PDSTQPL 1759
Query: 461 SPVLQEDIDIEGVQSEGQDNGAEDSGDTEDELRRVAEQKEHRLPPGQEENGEDPYAGSTD 520
S Q+ + ++E D A D E + + AE PP E+ DP + D
Sbjct: 1760 SKPAQKSEEANEPKAEKPDATA----DAEPDANQKAEAAPESQPPASEDLEVDPPVAAKD 1815
Query: 521 ENTDSEEHQEPP 532
+ + + + P
Sbjct: 1816 KKPNKSKRSKTP 1827
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 41.6 bits (96), Expect = 0.002
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 6/108 (5%)
Query: 199 SPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKTP 258
SP A GP+ + A+ S+ +P + GS + +G + L + TP
Sbjct: 243 SPAAAPSAPGPAPSQLPGLAALPLSAGAPAAAIAGSGPAAPAAFEGAQPLSRPESGASTP 302
Query: 259 SKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEP 306
P +P+ P PA PA AP P Q A + +P+ T P
Sbjct: 303 GGPAEPSAPAAPSAAPAPA---APAPAPAP---QSAASSQPQSASTPP 344
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 41.6 bits (96), Expect = 0.002
Identities = 53/212 (25%), Positives = 71/212 (33%), Gaps = 44/212 (20%)
Query: 140 SPFGLSFV-RFHSPPDKDEAEAPSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKT 198
SP G+S + PP K + P T +G A+ L +L F +K
Sbjct: 795 SPLGVSVSPQTKRPPTKKGSAGPD-----TPIGNLSSPVSPVEASFLPENSLSFQG-SKD 848
Query: 199 SPVTASDPAGPSYAAATLQASSAASS--------------------------ASPVSRAI 232
SP T P PS A ++ S A+P +
Sbjct: 849 SPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQA 908
Query: 233 GSTSKPQESPKGKRKLDLNQEEKKTPSK-----PPAQLSPSVPKRPKLPAP--TRTPATA 285
+ S SPK R + +PS PPA PS P P+P TP A
Sbjct: 909 PALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAA 968
Query: 286 PVPARAQGAVTGKPRGEGTEPRR----PRAGP 313
P+ G T P+G T P P+ GP
Sbjct: 969 TPPSPKGGPATPSPKGAPTPPAATPPSPKGGP 1000
Score = 39.7 bits (91), Expect = 0.009
Identities = 33/118 (27%), Positives = 43/118 (36%), Gaps = 2/118 (1%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKK 256
K P T S P AAT + + P A + + SPKG +
Sbjct: 1091 KGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPT 1150
Query: 257 TPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPE 314
TP+ P + P APT TPA P P+ G T P+G T P P+
Sbjct: 1151 TPAATPPSPKGGLATPPPKGAPT-TPAATP-PSPKGGLATPSPKGAPTTPAATPPSPK 1206
Score = 39.3 bits (90), Expect = 0.011
Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 6/124 (4%)
Query: 196 NKTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEK 255
+K P T S GP+ AAT + P + + P+ P + L+ K
Sbjct: 1356 SKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLS--PK 1413
Query: 256 KTPSKPPAQLSPSVPKRPKLPAPTRTPAT---APVPARAQGA-VTGKPRGEGTEPRRPRA 311
K P+ P + + P + L P TP + AP + +G T +G+ T P
Sbjct: 1414 KAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPP 1473
Query: 312 GPEE 315
P+E
Sbjct: 1474 SPKE 1477
Score = 37.7 bits (86), Expect = 0.032
Identities = 32/114 (28%), Positives = 44/114 (38%), Gaps = 10/114 (8%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKK 256
K P T+ P+ AAT + + P A + SPKG L
Sbjct: 1298 KGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPAT----- 1352
Query: 257 TPSKPPAQLSPSVPKRPKLPAPTRT----PATAPVPARAQGAVTGKPRGEGTEP 306
TPS +PS + P PA T + PA P P+ +G P+G+ T P
Sbjct: 1353 TPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTP-PSPKRGPAIPSPKGDPTSP 1405
Score = 37.4 bits (85), Expect = 0.042
Identities = 46/176 (26%), Positives = 63/176 (35%), Gaps = 26/176 (14%)
Query: 151 SPPDKDEAEAPSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPS 210
+PP E AP Q T + + A +L P + S K P T S P
Sbjct: 1471 TPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTL-PAVIPSSP--KEVPATPSSRRDPI 1527
Query: 211 YAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKTPSKPPAQLSPSV- 269
ATL + ++ +P A+ + SPK + +E TPS A P+V
Sbjct: 1528 APTATLLSKKTPATLAP-KEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVT 1586
Query: 270 ---------PKRPKLP----------APTRTPATAPVPARAQGAVTGKPRGEGTEP 306
PK +P APT T P P + G T P+G T P
Sbjct: 1587 PSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEK--GPATPAPKGTPTSP 1640
Score = 37.4 bits (85), Expect = 0.042
Identities = 32/92 (34%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Query: 198 TSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKR--KLDLNQEEK 255
T P PA P+ A SS +S+ P ST K SPK + K
Sbjct: 1554 TVPSPKKTPAIPTPKEAPATPSSKEASSPPA--VTPSTYKGAPSPKELLIPPAVTSPSPK 1611
Query: 256 KTPSKPPAQLSPSVPKRPKLPAPTRTPATAPV 287
+ P+ PPA PS K P PAP TP + PV
Sbjct: 1612 EAPT-PPAVTPPSPEKGPATPAPKGTPTSPPV 1642
Score = 36.6 bits (83), Expect = 0.072
Identities = 33/119 (27%), Positives = 45/119 (37%), Gaps = 4/119 (3%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAA-SSASPVSRAIGSTSKPQESPKGKRKLDLNQEEK 255
K P T S P+ AAT + ++ SP + + P SPKG ++
Sbjct: 1068 KGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPP-SPKGGLATPPHKGAP 1126
Query: 256 KTPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPE 314
TP+ P + P APT AT P P G T P+G T P P+
Sbjct: 1127 TTPAATPPSPKGGLATPPPKGAPTTPAATPPSP--KGGLATPPPKGAPTTPAATPPSPK 1183
Score = 36.2 bits (82), Expect = 0.095
Identities = 36/124 (29%), Positives = 47/124 (37%), Gaps = 10/124 (8%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKK 256
K P T S P+ AAT S A+P + G+ + P +P + K
Sbjct: 974 KGGPATPSPKGAPTPPAAT-PPSPKGGPATPSPK--GAPTPPAVTPPSPKGSPAATPFPK 1030
Query: 257 TPSKPPAQLSPSVPKRPKL-PAPTRTPAT--APVPARAQGAVTGKPRGEGTEPR----RP 309
S PPA PS P P P P T A +P+ G T +G T P P
Sbjct: 1031 GASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSP 1090
Query: 310 RAGP 313
+ GP
Sbjct: 1091 KGGP 1094
Score = 35.8 bits (81), Expect = 0.12
Identities = 40/150 (26%), Positives = 51/150 (34%), Gaps = 13/150 (8%)
Query: 202 TASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKTPSKP 261
T P+ A T + + SP A + SPKG K P
Sbjct: 1280 TPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSP----GTPPPKGAPTP 1335
Query: 262 PAQLSPSVPKRPKLPAPT-------RTPAT--APVPARAQGAVTGKPRGEGTEPRRPRAG 312
PA PS P LPA T TP++ P P A + G P P+R A
Sbjct: 1336 PAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAI 1395
Query: 313 PEELGKILQGVVVVLSGFQNPFRSELRDKA 342
P G V+ LS + P R+ A
Sbjct: 1396 PSPKGDPTSPAVIPLSPKKAPATPVTREGA 1425
Score = 35.0 bits (79), Expect = 0.21
Identities = 32/121 (26%), Positives = 45/121 (37%), Gaps = 7/121 (5%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKK 256
K P + S P+ AAT S A+P + + + P +P + K
Sbjct: 928 KGIPASPSPKGAPTPPAAT-PPSPKGGPATPSPK--WAPTPPAATPPSPKGGPATPSPKG 984
Query: 257 TPSKPPAQLSPSVPKRPKLPAPTRTP---ATAPVPARAQGAVTGKPRGEGTEPRRPRAGP 313
P+ PPA PS P P+P P A P + A T P+G T P P
Sbjct: 985 APT-PPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSP 1043
Query: 314 E 314
+
Sbjct: 1044 K 1044
Score = 35.0 bits (79), Expect = 0.21
Identities = 36/125 (28%), Positives = 48/125 (38%), Gaps = 12/125 (9%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKK 256
K P T S P+ AAT S A+P + G+ + P +P + K
Sbjct: 951 KGGPATPSPKWAPTPPAAT-PPSPKGGPATPSPK--GAPTPPAATPPSPKGGPATPSPKG 1007
Query: 257 TPSKPPAQLSPSVPKRPKL-PAP---TRTPATAPVPARAQGAVTGKPRGEGTEPR----R 308
P+ PPA PS P P P + PA P + A T P+G T P
Sbjct: 1008 APT-PPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPS 1066
Query: 309 PRAGP 313
P+ GP
Sbjct: 1067 PKGGP 1071
Score = 34.7 bits (78), Expect = 0.27
Identities = 29/121 (23%), Positives = 40/121 (33%), Gaps = 6/121 (4%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKK 256
K P T S P+ A T + + +A+P + ST P K K
Sbjct: 997 KGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKG-ASTPPAATPPSPKGSPAATPLPKG 1055
Query: 257 TPSKPPAQL-----SPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRA 311
P+ P A L P+ P P P +P A + G P P P+
Sbjct: 1056 APTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKG 1115
Query: 312 G 312
G
Sbjct: 1116 G 1116
Score = 33.9 bits (76), Expect = 0.47
Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 6/116 (5%)
Query: 202 TASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKTPSKP 261
T P+ AAT + + P A + + SPKG + TP+
Sbjct: 1142 TPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAAT 1201
Query: 262 PAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPR----RPRAGP 313
P + APT TPA P P+ G T P+G T P P+ GP
Sbjct: 1202 PPSPKGGLATPSPKGAPT-TPAATP-PSPKGGLATPSPKGAPTTPAATPPSPKGGP 1255
Score = 33.5 bits (75), Expect = 0.61
Identities = 64/277 (23%), Positives = 91/277 (32%), Gaps = 39/277 (14%)
Query: 202 TASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKTPSKP 261
T S P+ AAT + + P G+ + P +P + K P+
Sbjct: 1234 TPSPKGAPTTPAATPPSPKGGPATPPPK---GAPTPPAATPPSLKGGLATPPHKGAPN-- 1288
Query: 262 PAQLSPSVPK-----RPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPEEL 316
PA ++P PK P APT AT P P + G T P+G T P P+
Sbjct: 1289 PAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPG--TPPPKGAPTPPAVTPPSPKGT 1346
Query: 317 GKILQGVVVVLSGFQNPFRSE-LRDKALELGAKYRPDWTRDSTH---LICAFANTPKYSQ 372
+ G P E A K P T S I + P
Sbjct: 1347 PTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPA 1406
Query: 373 VLGLGGRIVRKEWVLDCHRMRRRLPSQRYLMAGPGSSSEED-------EASHSGGSGDEA 425
V+ L + + P+ G + S+ D S A
Sbjct: 1407 VIPLSPK---------------KAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSA 1451
Query: 426 PKLPQKQPQTKTKPT-QAAGPSSPQKPPTPEETKAAS 461
PK P +K PT A P SP++PP P++ +S
Sbjct: 1452 PKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSS 1488
Score = 33.5 bits (75), Expect = 0.61
Identities = 30/116 (25%), Positives = 44/116 (37%), Gaps = 17/116 (14%)
Query: 197 KTSPVTASDPAGPSYAAATLQASSAASSASPVSR------AIGSTSKPQESPKGKRKLDL 250
K P S P G + A + S + A+PV+R + G + P +P +K
Sbjct: 1390 KRGPAIPS-PKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPA 1448
Query: 251 NQEEKKTPSKPPAQ----------LSPSVPKRPKLPAPTRTPATAPVPARAQGAVT 296
K P+ P ++ SP P PK A + +P AP GA T
Sbjct: 1449 TSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPT 1504
Score = 33.1 bits (74), Expect = 0.80
Identities = 38/122 (31%), Positives = 49/122 (40%), Gaps = 17/122 (13%)
Query: 196 NKTSPVT-ASDPAGPSYAAATLQASSAASS--ASPVSRAIGSTSKPQESPKGKRKLDLNQ 252
+K +P T A+ P P AT A ++ A+P S G + P PKG
Sbjct: 1122 HKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPP---PKGAPTTPA-- 1176
Query: 253 EEKKTPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAG 312
TP P L+ PK APT TPA P P+ G T P+G T P
Sbjct: 1177 ---ATPPSPKGGLATPSPKG----APT-TPAATP-PSPKGGLATPSPKGAPTTPAATPPS 1227
Query: 313 PE 314
P+
Sbjct: 1228 PK 1229
Score = 31.2 bits (69), Expect = 3.0
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Query: 252 QEEKKTPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRA 311
Q +K + + PP PS K P T PA +P + + T K + P+ P A
Sbjct: 1705 QTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPL-LPVQKDSSKTAKGKDASHSPKGPLA 1763
Query: 312 GPE 314
PE
Sbjct: 1764 PPE 1766
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 41.6 bits (96), Expect = 0.002
Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 20/166 (12%)
Query: 152 PPDKDEAEAPSQKVTVTKLGQFRVKEE-DESANSLRPGALFFSRINKTSPVTASDPAGPS 210
PP+K+ +A +V+ + V E +SA++L PG + F+ S VT D
Sbjct: 434 PPEKEGDQAQLDAASVSSIQVVGVVEALIQSADTLFPGDINFNVSGLFSAVTLQDTVSDR 493
Query: 211 YAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKTPSKPPAQLSPSVP 270
A+ L +++ + A+ + A P +P L +++T S+ VP
Sbjct: 494 LASEELPSTAVPTPATTPAPA------PAPAPAPAPALASAATKERTESE--------VP 539
Query: 271 KRPKLPAPTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPEEL 316
RP P TR+P P T +P P RP P ++
Sbjct: 540 PRPASPKVTRSPPETAAPVEDMARRTKRP-----APARPTMPPPQV 580
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 41.2 bits (95), Expect = 0.003
Identities = 30/133 (22%), Positives = 50/133 (37%)
Query: 408 SSSEEDEASHSGGSGDEAPKLPQKQPQTKTKPTQAAGPSSPQKPPTPEETKAASPVLQED 467
S EED+ S DE + + + AA P+S + +E +ED
Sbjct: 145 SDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEED 204
Query: 468 IDIEGVQSEGQDNGAEDSGDTEDELRRVAEQKEHRLPPGQEENGEDPYAGSTDENTDSEE 527
E G + + + + VAE ++ E++ +D D+ D EE
Sbjct: 205 DSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEE 264
Query: 528 HQEPPDLPVPELP 540
+E + PV E P
Sbjct: 265 EEEEEEEPVKEAP 277
Score = 35.8 bits (81), Expect = 0.12
Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 14/123 (11%)
Query: 422 GDEAPKLPQKQPQTKTKPTQAAGP--SSPQKP--PTPEETKAASPVL---------QEDI 468
G +A P K+ T K G ++P K TP + AA P +ED
Sbjct: 86 GKKAAATPAKKTVTPAKAVTTPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKEDS 145
Query: 469 DIE-GVQSEGQDNGAEDSGDTEDELRRVAEQKEHRLPPGQEENGEDPYAGSTDENTDSEE 527
D E SE + ED + EDE+ A + P ++E+ ED D++ + ++
Sbjct: 146 DEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDD 205
Query: 528 HQE 530
+E
Sbjct: 206 SEE 208
Score = 32.7 bits (73), Expect = 1.0
Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 4/128 (3%)
Query: 404 AGPGSSSEEDEASHSGGSGDEAPKLPQKQPQTKTKPTQAAGPSSPQKPPTPEETKAASPV 463
A P S E+DE D+ + ++ +T P A G + + P + A
Sbjct: 180 AAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTP--AKGKKAAKVVPVKAKNVAEDED 237
Query: 464 LQEDIDIEGVQSEGQDNGAEDSGDTEDELRRVAEQKEHRLPPGQEENGEDPYAGSTDENT 523
+ED + E + D +D D E+E E++ + PG+ + + +
Sbjct: 238 EEEDDEDEDDDDDEDDEDDDDEDDEEEE--EEEEEEPVKEAPGKRKKEMAKQKAAPEAKK 295
Query: 524 DSEEHQEP 531
E EP
Sbjct: 296 QKVEGTEP 303
>gi|169202233 PREDICTED: hypothetical protein [Homo sapiens]
Length = 381
Score = 41.2 bits (95), Expect = 0.003
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 234 STSKPQESPKGKRKLDLNQEEKKTPSKP-PAQLSPSVPKRPKLPAPTRTPATAPVPARAQ 292
+T++PQ +P DL Q +++ +P PA+ P P RP A PATAP P RA
Sbjct: 281 TTTRPQTTPAAASP-DLPQPAERSRGEPRPAE--PRAPPRPPPAARRPPPATAPSPRRAG 337
Query: 293 GAVTGKPRGEGTEPRRPRAGPE 314
T R E PRR A P+
Sbjct: 338 SPPT---REEEPRPRRSAARPQ 356
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.129 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,124,960
Number of Sequences: 37866
Number of extensions: 1751732
Number of successful extensions: 16494
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 968
Number of HSP's that attempted gapping in prelim test: 11307
Number of HSP's gapped (non-prelim): 5089
length of query: 633
length of database: 18,247,518
effective HSP length: 108
effective length of query: 525
effective length of database: 14,157,990
effective search space: 7432944750
effective search space used: 7432944750
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.