Guide to the Human Genome
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Name: DACH2 Sequence: fasta or formatted (599aa) NCBI GI: 16876441
Description:

dachshund 2 isoform a

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [571aa] dachshund 2 isoform b
alt prot [432aa] dachshund 2 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         48           4
 C cysteine            1.0          6           1
 D aspartate           3.2         19           2
 E glutamate           6.2         37           2
 F phenylalanine       2.2         13           1
 G glycine             7.2         43           4
 H histidine           2.7         16           2
 I isoleucine          4.3         26           1
 K lysine              5.2         31           2
 L leucine            10.7         64           2
 M methionine          4.5         27           3
 N asparagine          5.2         31           2
 P proline             7.5         45           2
 Q glutamine           6.2         37           2
 R arginine            5.8         35           2
 S serine              8.3         50           3
 T threonine           6.0         36           2
 V valine              4.7         28           2
 W tryptophan          0.2          1           1
 Y tyrosine            1.0          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dachshund 2 isoform a 
DACH2                 0.941   dachshund 2 isoform b 
DACH2                 0.710   dachshund 2 isoform c 
DACH1                 0.462   dachshund homolog 1 isoform a 
DACH1                 0.199   dachshund homolog 1 isoform b 
DACH1                 0.168   dachshund homolog 1 isoform c 
FUSSEL18              0.031   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.031   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.031   PREDICTED: functional smad suppressing element 18 [...
LBXCOR1               0.028   LBXCOR1 homolog 
C10orf140             0.027   hypothetical protein LOC387640 
ENAH                  0.023   enabled homolog isoform a 
ENAH                  0.023   enabled homolog isoform b 
USP8                  0.022   ubiquitin specific peptidase 8 
USP8                  0.022   ubiquitin specific peptidase 8 
USP8                  0.022   ubiquitin specific peptidase 8 
SKI                   0.022   v-ski sarcoma viral oncogene homolog 
SKIL                  0.021   SKI-like isoform 3 
SKIL                  0.021   SKI-like isoform 1 
TCHH                  0.020   trichohyalin 
SAFB2                 0.019   scaffold attachment factor B2 
MYH9                  0.019   myosin, heavy polypeptide 9, non-muscle 
MAP4K4                0.019   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.019   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.019   mitogen-activated protein kinase kinase kinase kinas...
MAP7                  0.019   microtubule-associated protein 7 
SKIL                  0.018   SKI-like isoform 2 
EIF3A                 0.017   eukaryotic translation initiation factor 3, subunit 1...
GRAMD4                0.016   death-inducing-protein 
SLTM                  0.016   modulator of estrogen induced transcription isoform ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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