Guide to the Human Genome
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Name: DACH2 Sequence: fasta or formatted (432aa) NCBI GI: 213972568
Description:

dachshund 2 isoform c

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [599aa] dachshund 2 isoform a
alt prot [571aa] dachshund 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         39           4
 C cysteine            0.2          1           1
 D aspartate           3.0         13           2
 E glutamate           7.2         31           2
 F phenylalanine       1.4          6           1
 G glycine             6.2         27           2
 H histidine           2.8         12           2
 I isoleucine          4.4         19           1
 K lysine              5.6         24           2
 L leucine            11.1         48           2
 M methionine          4.9         21           3
 N asparagine          4.9         21           2
 P proline             8.1         35           2
 Q glutamine           7.4         32           2
 R arginine            5.1         22           2
 S serine              9.0         39           3
 T threonine           5.6         24           2
 V valine              3.0         13           1
 W tryptophan          0.2          1           1
 Y tyrosine            0.9          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dachshund 2 isoform c 
DACH2                 1.000   dachshund 2 isoform a 
DACH2                 0.941   dachshund 2 isoform b 
DACH1                 0.449   dachshund homolog 1 isoform a 
DACH1                 0.218   dachshund homolog 1 isoform b 
DACH1                 0.216   dachshund homolog 1 isoform c 
ENAH                  0.033   enabled homolog isoform a 
ENAH                  0.033   enabled homolog isoform b 
USP8                  0.032   ubiquitin specific peptidase 8 
USP8                  0.032   ubiquitin specific peptidase 8 
USP8                  0.032   ubiquitin specific peptidase 8 
SKI                   0.030   v-ski sarcoma viral oncogene homolog 
TCHH                  0.028   trichohyalin 
SAFB2                 0.027   scaffold attachment factor B2 
MYH9                  0.027   myosin, heavy polypeptide 9, non-muscle 
MAP4K4                0.027   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.027   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.027   mitogen-activated protein kinase kinase kinase kinas...
MAP7                  0.027   microtubule-associated protein 7 
EIF3A                 0.024   eukaryotic translation initiation factor 3, subunit 1...
GRAMD4                0.023   death-inducing-protein 
SLTM                  0.022   modulator of estrogen induced transcription isoform ...
SLTM                  0.022   modulator of estrogen induced transcription isoform ...
FKBP15                0.022   FK506 binding protein 15, 133kDa 
RABEP1                0.022   rabaptin, RAB GTPase binding effector protein 1 isof...
MAP7D1                0.022   MAP7 domain containing 1 
GOLGA6C               0.021   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
MYH10                 0.021   myosin, heavy polypeptide 10, non-muscle 
OFD1                  0.021   oral-facial-digital syndrome 1 
INCENP                0.021   inner centromere protein antigens 135/155kDa isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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