Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 190341019
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|190341019 phospholipid scramblase 4 isoform a [Homo sapiens]
(329 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|190341019 phospholipid scramblase 4 isoform a [Homo sapiens] 711 0.0
gi|190194379 phospholipid scramblase 4 isoform a [Homo sapiens] 711 0.0
gi|190194377 phospholipid scramblase 4 isoform a [Homo sapiens] 711 0.0
gi|10863877 phospholipid scramblase 1 [Homo sapiens] 288 4e-78
gi|190194381 phospholipid scramblase 4 isoform b [Homo sapiens] 269 3e-72
gi|9966795 phospholipid scramblase 2 [Homo sapiens] 241 5e-64
gi|146229354 phospholipid scramblase family, member 5 [Homo sapi... 207 1e-53
gi|31543417 phospholipid scramblase 3 [Homo sapiens] 201 1e-51
gi|239742160 PREDICTED: similar to hCG1794790 [Homo sapiens] 90 3e-18
gi|239748259 PREDICTED: similar to hCG1794790 [Homo sapiens] 89 5e-18
gi|239753717 PREDICTED: similar to hCG1794790 [Homo sapiens] 87 2e-17
gi|8922157 proline rich 13 isoform 1 [Homo sapiens] 47 3e-05
gi|50428940 mediator complex subunit 25 [Homo sapiens] 46 5e-05
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 45 9e-05
gi|7706501 WW domain binding protein 11 [Homo sapiens] 44 2e-04
gi|18959210 WIRE protein [Homo sapiens] 44 3e-04
gi|146134388 YLP motif containing 1 [Homo sapiens] 44 3e-04
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 43 3e-04
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 43 3e-04
gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens] 43 4e-04
gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens] 43 4e-04
gi|160707881 formin 2 [Homo sapiens] 43 4e-04
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 43 4e-04
gi|8922328 RNA binding motif protein 22 [Homo sapiens] 42 6e-04
gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens] 42 6e-04
gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 42 6e-04
gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 42 6e-04
gi|118344450 cell death inducing protein [Homo sapiens] 42 0.001
gi|150417989 cyclin K isoform 1 [Homo sapiens] 42 0.001
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] 41 0.001
>gi|190341019 phospholipid scramblase 4 isoform a [Homo sapiens]
Length = 329
Score = 711 bits (1836), Expect = 0.0
Identities = 329/329 (100%), Positives = 329/329 (100%)
Query: 1 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGY 60
MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGY
Sbjct: 1 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGY 60
Query: 61 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD 120
YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD
Sbjct: 61 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD 120
Query: 121 NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTD 180
NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTD
Sbjct: 121 NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTD 180
Query: 181 CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK 240
CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK
Sbjct: 181 CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK 240
Query: 241 ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL 300
ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL
Sbjct: 241 ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL 300
Query: 301 DVKMKAMIFGACFLIDFMYFERSPPQRSR 329
DVKMKAMIFGACFLIDFMYFERSPPQRSR
Sbjct: 301 DVKMKAMIFGACFLIDFMYFERSPPQRSR 329
>gi|190194379 phospholipid scramblase 4 isoform a [Homo sapiens]
Length = 329
Score = 711 bits (1836), Expect = 0.0
Identities = 329/329 (100%), Positives = 329/329 (100%)
Query: 1 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGY 60
MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGY
Sbjct: 1 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGY 60
Query: 61 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD 120
YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD
Sbjct: 61 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD 120
Query: 121 NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTD 180
NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTD
Sbjct: 121 NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTD 180
Query: 181 CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK 240
CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK
Sbjct: 181 CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK 240
Query: 241 ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL 300
ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL
Sbjct: 241 ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL 300
Query: 301 DVKMKAMIFGACFLIDFMYFERSPPQRSR 329
DVKMKAMIFGACFLIDFMYFERSPPQRSR
Sbjct: 301 DVKMKAMIFGACFLIDFMYFERSPPQRSR 329
>gi|190194377 phospholipid scramblase 4 isoform a [Homo sapiens]
Length = 329
Score = 711 bits (1836), Expect = 0.0
Identities = 329/329 (100%), Positives = 329/329 (100%)
Query: 1 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGY 60
MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGY
Sbjct: 1 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGY 60
Query: 61 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD 120
YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD
Sbjct: 61 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD 120
Query: 121 NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTD 180
NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTD
Sbjct: 121 NIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTD 180
Query: 181 CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK 240
CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK
Sbjct: 181 CMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKK 240
Query: 241 ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL 300
ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL
Sbjct: 241 ENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDL 300
Query: 301 DVKMKAMIFGACFLIDFMYFERSPPQRSR 329
DVKMKAMIFGACFLIDFMYFERSPPQRSR
Sbjct: 301 DVKMKAMIFGACFLIDFMYFERSPPQRSR 329
>gi|10863877 phospholipid scramblase 1 [Homo sapiens]
Length = 318
Score = 288 bits (738), Expect = 4e-78
Identities = 147/312 (47%), Positives = 190/312 (60%), Gaps = 23/312 (7%)
Query: 22 PPDPRPDA---PPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQPSTFPLYQPVGGI 78
PP P A PP Y+ + PGP + PPP G+ G P G+ P QP
Sbjct: 22 PPQYPPTAFQGPPGYSGY--PGPQVSYPPPPAGHSGPGPAGFPVPNQPV----------- 68
Query: 79 HPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLDNIHVLQHFEPLEMMTCFE 138
Y Y P + + WMP P P NCPPGLEYL Q+D I + Q E LE++T FE
Sbjct: 69 ----YNQPVYNQPVGAAGVPWMPAPQPPLNCPPGLEYLSQIDQILIHQQIELLEVLTGFE 124
Query: 139 TNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTDCMGREIMTMQRPFRCTCC 198
TNN+Y+IKN+ Q VY EDTD TRN RPF LR+ D MG+E++T++RP RC+ C
Sbjct: 125 TNNKYEIKNSFGQRVYFAAEDTDCCTRNCCGPSRPFTLRIIDNMGQEVITLERPLRCSSC 184
Query: 199 CFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSD 258
CCP QE+E+Q PPGV IG+V + W+ C ++IQNEK+E+V+++ GPC C D
Sbjct: 185 --CCPCCLQEIEIQAPPGVPIGYVIQTWHPCLPKFTIQNEKREDVLKISGPCVVCSCCGD 242
Query: 259 SVFEVKSLDGISNIGSIIRKWNGLL-SAMADADHFDIHFPLDLDVKMKAMIFGACFLIDF 317
FE+KSLD +G I + W G+L A DAD+F I FPLDLDVKMKA++ GACFLIDF
Sbjct: 243 VDFEIKSLDEQCVVGKISKHWTGILREAFTDADNFGIQFPLDLDVKMKAVMIGACFLIDF 302
Query: 318 MYFERSPPQRSR 329
M+FE + Q +
Sbjct: 303 MFFESTGSQEQK 314
>gi|190194381 phospholipid scramblase 4 isoform b [Homo sapiens]
Length = 239
Score = 269 bits (687), Expect = 3e-72
Identities = 119/120 (99%), Positives = 120/120 (100%)
Query: 1 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGY 60
MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGY
Sbjct: 1 MSGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGY 60
Query: 61 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLD 120
YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQL+
Sbjct: 61 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGLEYLVQLE 120
Score = 256 bits (654), Expect = 2e-68
Identities = 123/131 (93%), Positives = 125/131 (95%), Gaps = 3/131 (2%)
Query: 202 CPSARQ---ELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSD 258
CP + +LEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSD
Sbjct: 109 CPPGLEYLVQLEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSD 168
Query: 259 SVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDLDVKMKAMIFGACFLIDFM 318
SVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDLDVKMKAMIFGACFLIDFM
Sbjct: 169 SVFEVKSLDGISNIGSIIRKWNGLLSAMADADHFDIHFPLDLDVKMKAMIFGACFLIDFM 228
Query: 319 YFERSPPQRSR 329
YFERSPPQRSR
Sbjct: 229 YFERSPPQRSR 239
>gi|9966795 phospholipid scramblase 2 [Homo sapiens]
Length = 224
Score = 241 bits (616), Expect = 5e-64
Identities = 112/225 (49%), Positives = 154/225 (68%), Gaps = 3/225 (1%)
Query: 100 MPGPTPMANCPPGLEYLVQLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTED 159
MP P P NCPPGLEYL Q+D I + Q E LE++ FE++N Y+IKN+ Q +Y ED
Sbjct: 1 MPAPPPPLNCPPGLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAED 60
Query: 160 TDDFTRNAYRTLRPFVLRVTDCMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTI 219
T+ RN RPF LR+TD +GRE++T++RP RC CC CCP QE+E+Q PPGV +
Sbjct: 61 TNFCIRNCCGRSRPFTLRITDNVGREVITLERPLRCNCC--CCPCCLQEIEIQAPPGVPV 118
Query: 220 GFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKW 279
G+V + W+ C ++I+N+K+E+V+++ GPC C + FE+ SLD +G I + W
Sbjct: 119 GYVTQTWHPCLTKFTIKNQKREDVLKISGPCIVCSCIAGVDFEITSLDEQIVVGRISKHW 178
Query: 280 NGLL-SAMADADHFDIHFPLDLDVKMKAMIFGACFLIDFMYFERS 323
+G L A DAD+F I FP DLDVKMKA++ GACFLID+M+FER+
Sbjct: 179 SGFLREAFTDADNFGIQFPRDLDVKMKAVMIGACFLIDYMFFERT 223
>gi|146229354 phospholipid scramblase family, member 5 [Homo
sapiens]
Length = 271
Score = 207 bits (526), Expect = 1e-53
Identities = 110/255 (43%), Positives = 152/255 (59%), Gaps = 17/255 (6%)
Query: 83 YQPGKYPMPNQSVPITWMPGPT-------------PMANCPPGLEYLVQLDNIHVLQHFE 129
+ PG P P+QS+P + PG P + PPGLEYL QLD I + Q E
Sbjct: 16 FLPGA-PDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEYLSQLDLIIIHQQVE 74
Query: 130 PLEMMTCFETNNRYDIKNNSDQMVYIVTEDTDDFTRNAYRTLRPFVLRVTDCMGREIMTM 189
L M+ ET+N+Y+IKN+ Q +Y E++ F R TLR LR+TD GRE++T+
Sbjct: 75 LLGMILGTETSNKYEIKNSLGQRIYFAVEESICFNRTFCSTLRSCTLRITDNSGREVITV 134
Query: 190 QRPFRCTCCCFCCPSARQELEVQCPPGVTIGFVAEHWNLCRAVYSIQNEKKENVMRVRGP 249
RP RC C CP QELE+Q PPG +G+V + W+ ++IQN KE+++++ GP
Sbjct: 135 NRPLRCNSC--WCPCYLQELEIQAPPGTIVGYVTQKWDPFLPKFTIQNANKEDILKIVGP 192
Query: 250 CSTYGCGSDSVFEVKSLDGISNIGSIIRKWNGLLS-AMADADHFDIHFPLDLDVKMKAMI 308
C T GC D FEVK+++ IG I + W+G ++ +AD+F IH P DLDV +KA +
Sbjct: 193 CVTCGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDVFTNADNFGIHVPADLDVTVKAAM 252
Query: 309 FGACFLIDFMYFERS 323
GACFL DFM+FE S
Sbjct: 253 IGACFLFDFMFFEHS 267
>gi|31543417 phospholipid scramblase 3 [Homo sapiens]
Length = 295
Score = 201 bits (510), Expect = 1e-51
Identities = 111/284 (39%), Positives = 162/284 (57%), Gaps = 17/284 (5%)
Query: 54 GGLPMGYYSPQQPSTFPLYQ--PVGGIHPVRYQ---PGKYPMPNQSVPITWMPGPT---- 104
G LP Y+P P +P+ P +HP Q P + P P + PGP
Sbjct: 3 GYLPPKGYAPSPPPPYPVTPGYPEPALHPGPGQAPVPAQVPAPAPGFALFPSPGPVALGS 62
Query: 105 -----PMANCPPGLEYLVQLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTED 159
P+ P GLE+LVQ+D I + Q E +E +ET NRY++++ + Q + E+
Sbjct: 63 AAPFLPLPGVPSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAGQPLGQAAEE 122
Query: 160 TDDFTRNAYRTLRPFVLRVTDCMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVTI 219
++ R RP +R+ D RE++ + RP C C C CP QE+EVQ PPG TI
Sbjct: 123 SNCCARLCCGARRPLRVRLADPGDREVLRLLRPLHCGCSC--CPCGLQEMEVQAPPGTTI 180
Query: 220 GFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRKW 279
G V + W+ +SIQ+ ++ V+RV GPC T GCG+D+ FEVK+ D ++G I ++W
Sbjct: 181 GHVLQTWHPFLPKFSIQDADRQTVLRVVGPCWTCGCGTDTNFEVKTRDESRSVGRISKQW 240
Query: 280 NGLL-SAMADADHFDIHFPLDLDVKMKAMIFGACFLIDFMYFER 322
GL+ A+ DAD F + FPLDLDV++KA++ GA FLID+M+FE+
Sbjct: 241 GGLVREALTDADDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEK 284
>gi|239742160 PREDICTED: similar to hCG1794790 [Homo sapiens]
Length = 172
Score = 89.7 bits (221), Expect = 3e-18
Identities = 66/227 (29%), Positives = 101/227 (44%), Gaps = 64/227 (28%)
Query: 99 WMPGPTPMANCPPGLEYLVQLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTE 158
W+ P + +CP GLEYL Q++ + V QHF+PL ++ FET+ Y+I NN Q +Y E
Sbjct: 9 WLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQGQRIYFAEE 68
Query: 159 DTDDFTRNAYRTLRPFVLRVTDCMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVT 218
RN +C R + PF T
Sbjct: 69 ------RN-------------NCFLRHLCGFSSPFTMTI--------------------- 88
Query: 219 IGFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRK 278
+ N+ R V ++ K C S+ ++ +LD IG I ++
Sbjct: 89 ------YDNVGRDVLALHKALK--------------C---SLQKLLTLDEEMVIGKISKQ 125
Query: 279 WNGLLSA-MADADHFDIHFPLDLDVKMKAMIFGACFLIDFMYFERSP 324
++G + + + + F I FP DLDVK+KA++ GA FLI++MYFE P
Sbjct: 126 YSGFVRGILTNGEKFGIQFPFDLDVKIKALMLGATFLIEYMYFELWP 172
>gi|239748259 PREDICTED: similar to hCG1794790 [Homo sapiens]
Length = 172
Score = 89.0 bits (219), Expect = 5e-18
Identities = 66/227 (29%), Positives = 101/227 (44%), Gaps = 64/227 (28%)
Query: 99 WMPGPTPMANCPPGLEYLVQLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTE 158
W+ P + +CP GLEYL Q++ + V QHF+PL ++ FET+ Y+I NN Q +Y E
Sbjct: 9 WLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQVQRIYFAEE 68
Query: 159 DTDDFTRNAYRTLRPFVLRVTDCMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVT 218
RN +C R + PF T
Sbjct: 69 ------RN-------------NCFLRHLCGFSSPFTMTI--------------------- 88
Query: 219 IGFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRK 278
+ N+ R V ++ K C S+ ++ +LD IG I ++
Sbjct: 89 ------YDNVGRDVLALHKALK--------------C---SLQKLLTLDEEMVIGKISKQ 125
Query: 279 WNGLLSA-MADADHFDIHFPLDLDVKMKAMIFGACFLIDFMYFERSP 324
++G + + + + F I FP DLDVK+KA++ GA FLI++MYFE P
Sbjct: 126 YSGFVRGILTNGEKFGIQFPFDLDVKIKALMLGATFLIEYMYFELWP 172
>gi|239753717 PREDICTED: similar to hCG1794790 [Homo sapiens]
Length = 172
Score = 87.0 bits (214), Expect = 2e-17
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 64/227 (28%)
Query: 99 WMPGPTPMANCPPGLEYLVQLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVTE 158
W+ P + +CP GLEYL Q++ + V QHF+PL ++ FET+ Y+I NN Q +Y E
Sbjct: 9 WLSTPETITSCPLGLEYLHQINQLTVCQHFDPLGVLRKFETSKTYEILNNQVQRIYFAEE 68
Query: 159 DTDDFTRNAYRTLRPFVLRVTDCMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGVT 218
RN +C R + PF T
Sbjct: 69 ------RN-------------NCFLRHLCGFSSPFTMTI--------------------- 88
Query: 219 IGFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYGCGSDSVFEVKSLDGISNIGSIIRK 278
+ N+ R V ++ K C S+ ++ +LD IG I ++
Sbjct: 89 ------YDNVGRDVLALHKALK--------------C---SLQKLLTLDEEMVIGKISKQ 125
Query: 279 WNGLLSA-MADADHFDIHFPLDLDVKMKAMIFGACFLIDFMYFERSP 324
++G + + + + F I FP DLDVK+K ++ GA FLI++MYFE P
Sbjct: 126 YSGFVRGILTNGEKFGIQFPFDLDVKIKXLMLGATFLIEYMYFELWP 172
>gi|8922157 proline rich 13 isoform 1 [Homo sapiens]
Length = 148
Score = 46.6 bits (109), Expect = 3e-05
Identities = 28/65 (43%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 18 NQTKPPDPRPDAP--PEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQPSTFPLYQPV 75
N PP P P P P N F PG P VP P GYPG P+G Y P P P PV
Sbjct: 33 NPPFPPGPCPPPPGAPHGNPAFPPGGPPHPVPQP-GYPGCQPLGPYPPPYPPPAPGIPPV 91
Query: 76 GGIHP 80
+ P
Sbjct: 92 NPLAP 96
Score = 39.3 bits (90), Expect = 0.005
Identities = 28/76 (36%), Positives = 32/76 (42%), Gaps = 8/76 (10%)
Query: 22 PPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQPSTFPLYQP-VGGIHP 80
P P PP N F PGP PPP G P G P + P P P+ QP G P
Sbjct: 21 PGGSNPAHPPPINPPFPPGP----CPPPPGAPHGNPA--FPPGGP-PHPVPQPGYPGCQP 73
Query: 81 VRYQPGKYPMPNQSVP 96
+ P YP P +P
Sbjct: 74 LGPYPPPYPPPAPGIP 89
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 45.8 bits (107), Expect = 5e-05
Identities = 44/134 (32%), Positives = 54/134 (40%), Gaps = 23/134 (17%)
Query: 6 PTAPEQPAGEMENQTKPPDP-----RPDAPPEYNSHFL-PGPPGTAVPP---------PT 50
P AP+ P G PP P P A P+ S L P PP T VPP P
Sbjct: 615 PGAPQGPPGAASGPP-PPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPP 673
Query: 51 GYPGGLPMGYYSPQQPSTFP--LYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMAN 108
G P LP + QP P L+ P P + P + P+P Q + GP P
Sbjct: 674 GAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPP-RAPLPGQMLLSGGPRGPVPQ-- 730
Query: 109 CPPGLEYLVQLDNI 122
PGL+ V D+I
Sbjct: 731 --PGLQPSVMEDDI 742
Score = 33.5 bits (75), Expect = 0.27
Identities = 33/107 (30%), Positives = 42/107 (39%), Gaps = 19/107 (17%)
Query: 19 QTKPPDPRPDAPPEYNSHF-LPGPPGTAVPPPTGYPGGLPMGYYSPQQPSTFPLYQPVGG 77
Q +PP P+P + P P GTA PPP G P G P P P P+ +P
Sbjct: 584 QLRPPQPQPQGTVGASGATGQPQPQGTAQPPP-GAPQGPPGAASGPPPPG--PILRP--- 637
Query: 78 IHPVRYQPGKYP-----MPNQSVPITWMPGPTPMAN--CPPGLEYLV 117
PG P + N P T +P P + PPG L+
Sbjct: 638 -----QNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPALL 679
Score = 32.3 bits (72), Expect = 0.60
Identities = 30/106 (28%), Positives = 36/106 (33%), Gaps = 20/106 (18%)
Query: 8 APEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQPS 67
+P P + PP + AP PGPPG PPP QPS
Sbjct: 304 SPITPLQQAAPGVGPPFSQAPAP-----QLPPGPPGAPKPPPA-------------SQPS 345
Query: 68 TFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPGL 113
P G+ P QPG M P + GP+P P L
Sbjct: 346 LVSTVAPGSGLAPTA-QPGAPSMAGTVAP-GGVSGPSPAQLGAPAL 389
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 45.1 bits (105), Expect = 9e-05
Identities = 35/106 (33%), Positives = 44/106 (41%), Gaps = 20/106 (18%)
Query: 6 PTAPEQPAGEMENQTKPPDP---RPDAPPEYN---SHFLPGPPGTAV------------P 47
P PE+P + NQ++ P P +P+ PP S PPG P
Sbjct: 138 PGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGP 197
Query: 48 PPTGYPGGLPMGYYSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQ 93
PP G P G P +PQQP P +P G P Q G+ P P Q
Sbjct: 198 PPPGKPQGPPPAGGNPQQPQAPPAGKPQG--PPPPPQGGRPPRPAQ 241
Score = 33.9 bits (76), Expect = 0.20
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
Query: 11 QPAGEMENQTKPPDP-RPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQPSTF 69
+P G + Q PP P +P PP + GPP PPP G P G Q P
Sbjct: 40 RPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPP----PPPGKPEGRPPQGGNQSQGPPPH 95
Query: 70 P 70
P
Sbjct: 96 P 96
Score = 32.0 bits (71), Expect = 0.78
Identities = 31/114 (27%), Positives = 35/114 (30%), Gaps = 13/114 (11%)
Query: 6 PTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQ 65
P P G PP +P+ P + GPP P P G +P
Sbjct: 57 PQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPP 116
Query: 66 PSTFPLYQPVGG--IHPVRYQPGKYPMP-----NQSVPITWMPGPTPMANCPPG 112
P P GG H PGK P NQS GP P P G
Sbjct: 117 PGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQS------QGPPPHPGKPEG 164
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 44.3 bits (103), Expect = 2e-04
Identities = 41/130 (31%), Positives = 48/130 (36%), Gaps = 22/130 (16%)
Query: 3 GVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPG-------------PPGTAVPPP 49
G P P +P G PP P P APP +PG PPG PP
Sbjct: 414 GPPPAPPLRPPGPPTGL--PPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPP 471
Query: 50 TGYPGGLPMGYYSPQQPSTFPLYQPVGGIHPVR---YQPGKYPMPNQSVPITWMPGPTP- 105
G P GLP G P P P GI P R +P P + P + P P P
Sbjct: 472 PGPPPGLPPGPPPRGPPPRLPPPAP-PGIPPPRPGMMRPPLVPPLGPAPPGLFPPAPLPN 530
Query: 106 --MANCPPGL 113
+ + PP L
Sbjct: 531 PGVLSAPPNL 540
Score = 39.3 bits (90), Expect = 0.005
Identities = 34/104 (32%), Positives = 38/104 (36%), Gaps = 7/104 (6%)
Query: 8 APEQPAGEMENQTKP-PDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQP 66
AP Q + Q P P P P PP PGPP P P P G P P P
Sbjct: 392 APPQSVPPSQIQAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGP---PPGAPPFLRPPGMP 448
Query: 67 STFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCP 110
L P+ + P PG+ P P P PGP P P
Sbjct: 449 G---LRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPP 489
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 43.5 bits (101), Expect = 3e-04
Identities = 33/98 (33%), Positives = 39/98 (39%), Gaps = 10/98 (10%)
Query: 22 PPDPRPDAPPEYNSHFLPGPPGTAV---PPPTGYPGGLPMGYYSPQQPSTFPLYQPVGGI 78
PP P P PP + GP G ++ PPP P G+P G SP S L Q +
Sbjct: 224 PPAPPPVKPPPSPVNIRTGPSGQSLAPPPPPYRQPPGVPNGPSSPTNESAPELPQRHNSL 283
Query: 79 HPVRYQPGKY-----PMPNQSVPITWMPGPTPMANCPP 111
H R PG P P + P P P A PP
Sbjct: 284 H--RKTPGPVRGLAPPPPTSASPSLLSNRPPPPARDPP 319
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 43.5 bits (101), Expect = 3e-04
Identities = 39/123 (31%), Positives = 45/123 (36%), Gaps = 25/123 (20%)
Query: 5 VPTAPEQPAGEMENQTKPPDPRPDAP---------PEYNSHFL----PGPPGTAVP---- 47
+P P P G + PP P P P +Y L GPPG VP
Sbjct: 86 LPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQMLHHQRDGPPG-LVPMELE 144
Query: 48 -PPTGYPGGLPMGYYSPQQPSTFPLYQPVGGIHPVR----YQPGKYPMPNQSVPITWMPG 102
PP P +P G Y P S P QP +P Y P P P+QS P
Sbjct: 145 SPPESPP--VPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYLA 202
Query: 103 PTP 105
PTP
Sbjct: 203 PTP 205
Score = 33.9 bits (76), Expect = 0.20
Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 9/94 (9%)
Query: 23 PDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQPSTFPLYQPVGGIHPVR 82
P P P PP LP P P T P G+P P P + P P G+ P
Sbjct: 527 PPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMP----PPVMPPSLPTSVPPPGMPPSL 582
Query: 83 YQPGKYP-MPNQSV----PITWMPGPTPMANCPP 111
G P +P S+ P +P P+ + PP
Sbjct: 583 SSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPP 616
Score = 30.4 bits (67), Expect = 2.3
Identities = 32/121 (26%), Positives = 38/121 (31%), Gaps = 17/121 (14%)
Query: 22 PPDPRPDAPPEYNSHFLPGP-----PGTAVPPPTGYPGGLPMGYYSPQQPSTFPLYQPVG 76
PP P P PP PGP A P +G+ QQ Q
Sbjct: 15 PPPPVPPPPPVALPEASPGPGYSSSTTPAAPSSSGFMSFREQHLAQLQQLQQMHQKQMQC 74
Query: 77 GIHPVRYQPGKYPMPNQSVPI-------TWMPGPTPMANCP-PGLEYLVQLDNIHVLQHF 128
+ P P P P P+ W P P PM P P L Y Q H + H
Sbjct: 75 VLQPHHLPPPPLPPP----PVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQMLHH 130
Query: 129 E 129
+
Sbjct: 131 Q 131
Score = 30.4 bits (67), Expect = 2.3
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 11/65 (16%)
Query: 3 GVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYS 62
G+VP E P ++ P P PP + ++P P PPP+ YP Y
Sbjct: 137 GLVPMELESPP-----ESPPVPPGSYMPPSQS--YMPPPQ----PPPSYYPPTSSQPYLP 185
Query: 63 PQQPS 67
P QPS
Sbjct: 186 PAQPS 190
Score = 29.3 bits (64), Expect = 5.0
Identities = 31/104 (29%), Positives = 38/104 (36%), Gaps = 10/104 (9%)
Query: 9 PEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQPST 68
P P M P P PP +S GPP +PPP+ G P P ST
Sbjct: 558 PGMPPPVMPPSLPTSVPPPGMPPSLSS---AGPP-PVLPPPSLSSAGPPPVLPPPSLSST 613
Query: 69 FPLYQPVGGIHPV--RYQPGKYPMPN--QSVPITWMPGPTPMAN 108
P PV + P+ P P P Q +P P P A+
Sbjct: 614 AP--PPVMPLPPLSSATPPPGIPPPGVPQGIPPQLTAAPVPPAS 655
Score = 29.3 bits (64), Expect = 5.0
Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 20/100 (20%)
Query: 22 PPDPRPDAPPEYNSHFLPGPP-GTAVPPPTGYPGGLPMGYYSPQQPSTFPLYQPVGGIH- 79
PP APP +P PP +A PPP P G+P G P Q + P+ P
Sbjct: 607 PPSLSSTAPPPV----MPLPPLSSATPPPGIPPPGVPQGI--PPQLTAAPV-PPASSSQS 659
Query: 80 ---PVRYQPGKYPMP---NQSVPITWMP-----GPTPMAN 108
P + +P P P + P T+ P GP+ N
Sbjct: 660 SQVPEKPRPALLPTPVSFGSAPPTTYHPPLQSAGPSEQVN 699
Score = 29.3 bits (64), Expect = 5.0
Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 25/104 (24%)
Query: 15 EMENQTKPPDPRPDAPPE----YNSHFLPG---PPGTAVPPPTGYPGGLPMGYYSPQQPS 67
+M++ P PP+ N+ PG PPG+ PPP P G P G S +PS
Sbjct: 1475 KMKDFGSEPQMADHLPPQESRLQNTSSRPGMYPPPGSYRPPP---PMGKPPG--SIVRPS 1529
Query: 68 TFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPP 111
P V P+ VPI P P P+ PP
Sbjct: 1530 APPARSSV-------------PVTRPPVPIPPPPPPPPLPPPPP 1560
Score = 28.5 bits (62), Expect = 8.6
Identities = 28/96 (29%), Positives = 36/96 (37%), Gaps = 24/96 (25%)
Query: 36 HFLPGPPGTAVPPPTGYPGGLPMGYYSPQQPSTFPLYQPVGGIHPVRYQ----------- 84
H LP PP +PP P +P G Y QP P+ P G + Q
Sbjct: 79 HHLPPPP---LPP----PPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQMLHHQ 131
Query: 85 ----PGKYPMPNQSVPITWMPGPTPMANCPPGLEYL 116
PG PM +S P + P P + PP Y+
Sbjct: 132 RDGPPGLVPMELESPPES--PPVPPGSYMPPSQSYM 165
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 43.1 bits (100), Expect = 3e-04
Identities = 35/97 (36%), Positives = 38/97 (39%), Gaps = 23/97 (23%)
Query: 22 PPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQPSTF----PLYQPVGG 77
PP P P P PGPP +PP G P G PMG+ P P PL P G
Sbjct: 334 PPRPPPGMPH-------PGPPPMGMPP-RGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGY 385
Query: 78 IHPVRYQPGKY---PMPNQSVPITWMPGPTPMANCPP 111
P R P Y P+P P PTP PP
Sbjct: 386 TGPPRPPPYGYQRGPLP--------PPRPTPRPPVPP 414
Score = 32.0 bits (71), Expect = 0.78
Identities = 26/101 (25%), Positives = 32/101 (31%), Gaps = 23/101 (22%)
Query: 6 PTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQ 65
P+AP + + PP P PG VPPP P G+P P
Sbjct: 218 PSAPNPVVSSLGSGLPPPGMPP-----------PGSFPPPVPPPGALPPGIPPAMPPPPM 266
Query: 66 PSTFPLYQPV------------GGIHPVRYQPGKYPMPNQS 94
P + P G HP + PG P P S
Sbjct: 267 PPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPGMS 307
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 43.1 bits (100), Expect = 3e-04
Identities = 35/109 (32%), Positives = 43/109 (39%), Gaps = 20/109 (18%)
Query: 6 PTAPEQPAGEMENQTKPPDPRP---DAPPEYNSHFLPGPPG---------------TAVP 47
P PE P + NQ++ P PRP + PP + GPP P
Sbjct: 201 PGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRP 260
Query: 48 PPTGYPGGLPMGYYSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVP 96
PP G P G P +PQQP P +P G P Q G+ P Q P
Sbjct: 261 PPPGRPQGPPPPGGNPQQPLPPPAGKPQG--PPPPPQGGRPHRPPQGQP 307
Score = 36.2 bits (82), Expect = 0.041
Identities = 37/128 (28%), Positives = 46/128 (35%), Gaps = 26/128 (20%)
Query: 6 PTAPEQPAGEMENQTKPPDP---RPDAPPEYNSHFLPGPP----------------GTAV 46
P PE P + NQ++ P P +P+ PP + GPP
Sbjct: 159 PGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGP 218
Query: 47 PPPTGYPGGLP-MGYYSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPN--QSVPITWMPGP 103
PP G P G P G PQ P P +P G +P + P P Q P PG
Sbjct: 219 PPRPGKPEGPPSQGGNKPQGPPPHP-GKPQGPPPQEGNKPQRPPPPGRPQGPP---PPGG 274
Query: 104 TPMANCPP 111
P PP
Sbjct: 275 NPQQPLPP 282
Score = 34.3 bits (77), Expect = 0.16
Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Query: 6 PTAPEQPAGEMENQTKPPDPR---PDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYS 62
P PE P + NQ++ P PR P+ PP + GPP P P G P G
Sbjct: 117 PGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPP----PRPGKPEGPPPQGGNQ 172
Query: 63 PQQPSTFP 70
Q P P
Sbjct: 173 SQGPPPHP 180
Score = 33.5 bits (75), Expect = 0.27
Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Query: 6 PTAPEQPAGEMENQTKPPDPR---PDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYS 62
P PE P + NQ++ P PR P+ PP + GPP P P G P G
Sbjct: 138 PGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPP----PHPGKPEGPPPQGGNQ 193
Query: 63 PQQPSTFP 70
Q P P
Sbjct: 194 SQGPPPRP 201
Score = 31.2 bits (69), Expect = 1.3
Identities = 36/119 (30%), Positives = 42/119 (35%), Gaps = 20/119 (16%)
Query: 6 PTAPEQPAGEMENQTKPPDPR---PDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYS 62
P PE P + NQ++ P PR P+ P + GPP P P G
Sbjct: 75 PGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGP 134
Query: 63 PQQPSTFPLYQPVGGIH----PVRYQPGKYPMP-----NQSVPITWMPGPTPMANCPPG 112
P +P P GG P R PGK P NQS GP P P G
Sbjct: 135 PPRPGKPEGPPPQGGNQSQGPPPR--PGKPEGPPPQGGNQS------QGPPPHPGKPEG 185
Score = 30.0 bits (66), Expect = 3.0
Identities = 27/109 (24%), Positives = 35/109 (32%), Gaps = 3/109 (2%)
Query: 6 PTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQ 65
P G +T PP +P+ P + GPP P P G P +
Sbjct: 36 PEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPR 95
Query: 66 PSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPI--TWMPGPTPMANCPPG 112
P P QP G + + P + P P GP P P G
Sbjct: 96 PGK-PEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEG 143
>gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]
Length = 378
Score = 42.7 bits (99), Expect = 4e-04
Identities = 38/124 (30%), Positives = 48/124 (38%), Gaps = 19/124 (15%)
Query: 3 GVVPTAPEQPAGEMENQTKPPDP---RPDAPPEYNSHFLPGPPGTAVPPPTGYPGG---- 55
G P PAG+ PP P PP + S+ + PPG PPP G+P G
Sbjct: 229 GYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPG-GFPPPQGFPQGYGAP 287
Query: 56 --LPMGYYSPQQPSTFPLYQPVGGIHPVRYQPGKYPM-----PNQSVPITWMPGPTPMAN 108
GY P P P G+ P PG P+ P+Q+ P P PT +
Sbjct: 288 PQFSFGYGPPPPP---PDQFAPPGVPPPPATPGAAPLAFPPPPSQAAPDMSKP-PTAQPD 343
Query: 109 CPPG 112
P G
Sbjct: 344 FPYG 347
>gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]
Length = 407
Score = 42.7 bits (99), Expect = 4e-04
Identities = 38/124 (30%), Positives = 48/124 (38%), Gaps = 19/124 (15%)
Query: 3 GVVPTAPEQPAGEMENQTKPPDP---RPDAPPEYNSHFLPGPPGTAVPPPTGYPGG---- 55
G P PAG+ PP P PP + S+ + PPG PPP G+P G
Sbjct: 229 GYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPG-GFPPPQGFPQGYGAP 287
Query: 56 --LPMGYYSPQQPSTFPLYQPVGGIHPVRYQPGKYPM-----PNQSVPITWMPGPTPMAN 108
GY P P P G+ P PG P+ P+Q+ P P PT +
Sbjct: 288 PQFSFGYGPPPPP---PDQFAPPGVPPPPATPGAAPLAFPPPPSQAAPDMSKP-PTAQPD 343
Query: 109 CPPG 112
P G
Sbjct: 344 FPYG 347
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 42.7 bits (99), Expect = 4e-04
Identities = 38/116 (32%), Positives = 46/116 (39%), Gaps = 18/116 (15%)
Query: 2 SGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPG-GLPMGY 60
+G+ P P AG + PP P PP P PG A+PPP PG G+P+
Sbjct: 918 AGIPPPPPLPGAGILP---LPPLPGAGIPPP------PPLPGAAIPPPPPLPGAGIPLPP 968
Query: 61 YSPQQPSTFPLYQPVGGIHPVRYQPG-----KYPMPNQSVPITWMPGPTPMANCPP 111
P P P GI P PG P+P +P P P P A PP
Sbjct: 969 PLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP---PPPPLPGAGIPP 1021
Score = 42.7 bits (99), Expect = 4e-04
Identities = 40/123 (32%), Positives = 47/123 (38%), Gaps = 21/123 (17%)
Query: 2 SGVVPTAPEQPAGEMENQTKPPDPRPDA----PPEYNSHFLPGPP---GTAVPPPTGYPG 54
+G+ P P AG PP P P A PP +P PP G +PPP PG
Sbjct: 973 AGIPPPPPLPGAG-----IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1027
Query: 55 -GLPMGYYSPQQPSTFPLYQPVGGIHPVRYQPG-----KYPMPNQSVPITWMPGPTPMAN 108
G+P P P P GI P PG P+P +P P P P A
Sbjct: 1028 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP---PPPPLPGAG 1084
Query: 109 CPP 111
PP
Sbjct: 1085 IPP 1087
Score = 41.6 bits (96), Expect = 0.001
Identities = 39/123 (31%), Positives = 46/123 (37%), Gaps = 21/123 (17%)
Query: 2 SGVVPTAPEQPAGEMENQTKPPDPRPDA----PPEYNSHFLPGPP---GTAVPPPTGYPG 54
+G+ P P AG PP P P A PP +P PP G +PPP PG
Sbjct: 1039 AGIPPPPPLPGAG-----IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1093
Query: 55 -GLPMGYYSPQQPSTFPLYQPVGGIHPVRYQPG-----KYPMPNQSVPITWMPGPTPMAN 108
G+P P P P GI P PG P+P +P P P P
Sbjct: 1094 AGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP---PPPPLPRVG 1150
Query: 109 CPP 111
PP
Sbjct: 1151 IPP 1153
Score = 38.1 bits (87), Expect = 0.011
Identities = 40/124 (32%), Positives = 47/124 (37%), Gaps = 23/124 (18%)
Query: 2 SGVVPTAPEQPAGEMENQTKPPDPRPDA----PPEYNSHFLPGPP---GTAVPPPTGYPG 54
+G+ P P AG PP P P A PP +P PP G +PPP PG
Sbjct: 1116 AGIPPPPPLPGAG-----IPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPG 1170
Query: 55 -GLPMGYYSPQQPSTFPLYQPVGGIHPVRYQPG-----KYPMPNQSVPITWMPGPTPMAN 108
G+P P P P GI P PG P+P +P P P P
Sbjct: 1171 AGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIP----PAPAPPLP 1226
Query: 109 CPPG 112
PPG
Sbjct: 1227 -PPG 1229
Score = 35.4 bits (80), Expect = 0.070
Identities = 31/109 (28%), Positives = 41/109 (37%), Gaps = 10/109 (9%)
Query: 5 VPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQ 64
+P+ P P E + P PP +P P TA+P P P+
Sbjct: 855 IPSPPPLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQPP------PLQGTEML 908
Query: 65 QPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPM--ANCPP 111
P PL P GI P PG +P +P +P P P+ A PP
Sbjct: 909 PPPPPPL--PGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPP 955
Score = 30.4 bits (67), Expect = 2.3
Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 15/78 (19%)
Query: 5 VPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYP-GGLPMGYYSP 63
+P A P + PP P P PP PGT +PPP P G P+ P
Sbjct: 1201 LPGAGIPPPPPLPGMGIPPAPAPPLPP----------PGTGIPPPPLLPVSGPPL---LP 1247
Query: 64 Q-QPSTFPLYQPVGGIHP 80
Q ST P Q G + P
Sbjct: 1248 QVGSSTLPTPQVCGFLPP 1265
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 42.7 bits (99), Expect = 4e-04
Identities = 33/116 (28%), Positives = 39/116 (33%), Gaps = 11/116 (9%)
Query: 2 SGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYY 61
SG P P P + + Q P P P PP + P P PPP P+
Sbjct: 54 SGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPV--- 110
Query: 62 SPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTP-----MANCPPG 112
Q P P VG P P P PGPTP + + PPG
Sbjct: 111 VAQGPGPAP---GVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPG 163
Score = 32.7 bits (73), Expect = 0.46
Identities = 31/104 (29%), Positives = 36/104 (34%), Gaps = 8/104 (7%)
Query: 12 PAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQPSTFPL 71
P G Q+ P P P PP H P PPP P P + P Q P
Sbjct: 46 PMGPGPGQSGPKPPIPPPPP----HQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQ-PP 100
Query: 72 YQPVGGIHPVRYQ-PGKYPMPNQSVPITWM--PGPTPMANCPPG 112
P PV Q PG P + P + P P + PPG
Sbjct: 101 PPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPG 144
Score = 32.0 bits (71), Expect = 0.78
Identities = 31/101 (30%), Positives = 34/101 (33%), Gaps = 23/101 (22%)
Query: 2 SGVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPG------- 54
SG PT PA + PP P PP P G PPP PG
Sbjct: 145 SGPGPTPTPPPAVT----SAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQ 200
Query: 55 ----GLPMGYYSPQQPSTFPLYQPVGGIHPVRYQPGKYPMP 91
G P G P P +P GG P PG +P P
Sbjct: 201 GPGPGGPKGGKMPGGP------KPGGG--PGLSTPGGHPKP 233
Score = 30.0 bits (66), Expect = 3.0
Identities = 29/107 (27%), Positives = 34/107 (31%), Gaps = 21/107 (19%)
Query: 8 APEQPAGEMENQTKPP--DPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQ 65
AP + + + PP P APP P PP P G P P
Sbjct: 118 APGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTP-------- 169
Query: 66 PSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPG 112
P G+ Q G P P +VP PGP P PG
Sbjct: 170 --------PSSGVPTTPPQAGGPPPPPAAVP---GPGPGPKQGPGPG 205
>gi|8922328 RNA binding motif protein 22 [Homo sapiens]
Length = 420
Score = 42.4 bits (98), Expect = 6e-04
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Query: 3 GVVPTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGL--PMGY 60
G+ P PA E E + P PP + LP PPG A PPP G+ + PMG
Sbjct: 330 GLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPMGP 389
Query: 61 YSPQQPSTFPLYQPVGGIHPVRYQPGKYPMP 91
P + P++ P + GK+ P
Sbjct: 390 PPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP 420
>gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]
Length = 166
Score = 42.4 bits (98), Expect = 6e-04
Identities = 31/104 (29%), Positives = 36/104 (34%), Gaps = 18/104 (17%)
Query: 9 PEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQPST 68
P Q G+ + PP +P PP+ H PPP G P G P P+ P
Sbjct: 73 PPQQGGQQQQGPPPPQGKPQGPPQQGGH---------PPPPQGRPQGPPQQGGHPRPPRG 123
Query: 69 FPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPG 112
P P G H Q G P P GP P P G
Sbjct: 124 RPQGPPQQGGH----QQGPPPPPPGK-----PQGPPPQGGRPQG 158
Score = 38.5 bits (88), Expect = 0.008
Identities = 24/61 (39%), Positives = 26/61 (42%), Gaps = 9/61 (14%)
Query: 6 PTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQ 65
P P Q G +PP RP PP+ H GPP PPP G P G P PQ
Sbjct: 108 PQGPPQQGGH----PRPPRGRPQGPPQQGGH-QQGPP----PPPPGKPQGPPPQGGRPQG 158
Query: 66 P 66
P
Sbjct: 159 P 159
Score = 33.9 bits (76), Expect = 0.20
Identities = 28/94 (29%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Query: 12 PAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQPSTFPL 71
P G ++Q D D P+ G PPP G P G P P P P
Sbjct: 50 PLGGQQSQPSAGDGNQDDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQ 109
Query: 72 YQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTP 105
P G HP R G+ P Q P P P
Sbjct: 110 GPPQQGGHP-RPPRGRPQGPPQQGGHQQGPPPPP 142
>gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 42.4 bits (98), Expect = 6e-04
Identities = 31/104 (29%), Positives = 36/104 (34%), Gaps = 18/104 (17%)
Query: 9 PEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQPST 68
P Q G+ + PP +P PP+ H PPP G P G P P+ P
Sbjct: 73 PPQQGGQQQQGPPPPQGKPQGPPQQGGH---------PPPPQGRPQGPPQQGGHPRPPRG 123
Query: 69 FPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPG 112
P P G H Q G P P GP P P G
Sbjct: 124 RPQGPPQQGGH----QQGPPPPPPGK-----PQGPPPQGGRPQG 158
Score = 38.5 bits (88), Expect = 0.008
Identities = 24/61 (39%), Positives = 26/61 (42%), Gaps = 9/61 (14%)
Query: 6 PTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQ 65
P P Q G +PP RP PP+ H GPP PPP G P G P PQ
Sbjct: 108 PQGPPQQGGH----PRPPRGRPQGPPQQGGH-QQGPP----PPPPGKPQGPPPQGGRPQG 158
Query: 66 P 66
P
Sbjct: 159 P 159
Score = 32.7 bits (73), Expect = 0.46
Identities = 30/95 (31%), Positives = 33/95 (34%), Gaps = 9/95 (9%)
Query: 11 QPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQPSTFP 70
QP+ NQ P PP+ GPP PP G P G P P P P
Sbjct: 57 QPSAGDGNQNDGPQ---QGPPQQGGQQQQGPP-----PPQGKPQGPPQQGGHPPPPQGRP 108
Query: 71 LYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTP 105
P G HP R G+ P Q P P P
Sbjct: 109 QGPPQQGGHP-RPPRGRPQGPPQQGGHQQGPPPPP 142
>gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 42.4 bits (98), Expect = 6e-04
Identities = 31/104 (29%), Positives = 36/104 (34%), Gaps = 18/104 (17%)
Query: 9 PEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQPST 68
P Q G+ + PP +P PP+ H PPP G P G P P+ P
Sbjct: 73 PPQQGGQQQQGPPPPQGKPQGPPQQGGH---------PPPPQGRPQGPPQQGGHPRPPRG 123
Query: 69 FPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPPG 112
P P G H Q G P P GP P P G
Sbjct: 124 RPQGPPQQGGH----QQGPPPPPPGK-----PQGPPPQGGRPQG 158
Score = 38.5 bits (88), Expect = 0.008
Identities = 24/61 (39%), Positives = 26/61 (42%), Gaps = 9/61 (14%)
Query: 6 PTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQ 65
P P Q G +PP RP PP+ H GPP PPP G P G P PQ
Sbjct: 108 PQGPPQQGGH----PRPPRGRPQGPPQQGGH-QQGPP----PPPPGKPQGPPPQGGRPQG 158
Query: 66 P 66
P
Sbjct: 159 P 159
Score = 32.7 bits (73), Expect = 0.46
Identities = 30/95 (31%), Positives = 33/95 (34%), Gaps = 9/95 (9%)
Query: 11 QPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPPPTGYPGGLPMGYYSPQQPSTFP 70
QP+ NQ P PP+ GPP PP G P G P P P P
Sbjct: 57 QPSAGDGNQNDGPQ---QGPPQQGGQQQQGPP-----PPQGKPQGPPQQGGHPPPPQGRP 108
Query: 71 LYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTP 105
P G HP R G+ P Q P P P
Sbjct: 109 QGPPQQGGHP-RPPRGRPQGPPQQGGHQQGPPPPP 142
>gi|118344450 cell death inducing protein [Homo sapiens]
Length = 208
Score = 41.6 bits (96), Expect = 0.001
Identities = 31/102 (30%), Positives = 38/102 (37%), Gaps = 7/102 (6%)
Query: 2 SGVVPTAPEQPAGEMENQTKPPDPRPD-APPEYNSHFLPGPPGTAVPPPTGYPGG-LPMG 59
SG PT M+ P P D PP Y P P +PP G +P G
Sbjct: 22 SGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPGFIPPHMSADGTYMPPG 81
Query: 60 YYSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMP 101
+Y P P + P+G P Y PG YP P +P
Sbjct: 82 FYPPPGP-----HPPMGYYPPGPYTPGPYPGPGGHTATVLVP 118
Score = 37.0 bits (84), Expect = 0.024
Identities = 32/109 (29%), Positives = 40/109 (36%), Gaps = 21/109 (19%)
Query: 6 PTAPEQPAGEMENQTKPPDPRPDAPPEYNSHFLPGPPGTAVPP---------PTGYPGGL 56
P P P E E PP P +P + PPG +PP P G+P +
Sbjct: 10 PGGPTAPLLE-EKSGAPPTPGRSSPA-----VMQPPPGMPLPPADIGPPPYEPPGHP--M 61
Query: 57 PMGYYSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITWMPGPTP 105
P + P S Y P G P PG +P P + PGP P
Sbjct: 62 PQPGFIPPHMSADGTYMPPGFYPP----PGPHPPMGYYPPGPYTPGPYP 106
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 41.6 bits (96), Expect = 0.001
Identities = 33/94 (35%), Positives = 39/94 (41%), Gaps = 11/94 (11%)
Query: 22 PPDPRPDAPPEYNSHFLPGP-PGTAVPPPTGYPGGLPMGYYSPQQPST--FPLYQPVG-G 77
PP P P P + +P P PG PPPT P P P+ P T P + P G G
Sbjct: 483 PPPPVPPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPP---PPRLPPTHAVPPHPPPGLG 539
Query: 78 IHPVRYQPGKYPMPNQSVPITWMPGPTPMANCPP 111
+ P Y P P P P+ P P P PP
Sbjct: 540 LPPASYPPPAVP-PGGQPPV---PPPIPPPGMPP 569
Score = 39.7 bits (91), Expect = 0.004
Identities = 29/89 (32%), Positives = 34/89 (38%), Gaps = 16/89 (17%)
Query: 6 PTAPEQPAGEMENQTKPPDPR-PDAPPEYNSHFLPGPP--------------GTAVPPPT 50
P P PA PP P P PP YN +F P PP G +PP +
Sbjct: 485 PPVPPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPPPPRLPPTHAVPPHPPPGLGLPPAS 544
Query: 51 GYPGGLPMGYYSPQQPSTFPL-YQPVGGI 78
P +P G P P P PVGG+
Sbjct: 545 YPPPAVPPGGQPPVPPPIPPPGMPPVGGL 573
Score = 38.9 bits (89), Expect = 0.006
Identities = 32/93 (34%), Positives = 37/93 (39%), Gaps = 17/93 (18%)
Query: 22 PPDPRPDAPPEYNSH-FLPGPPGTAVPPPTGYPGGLPMGYYSPQQPSTFPLYQPVGGIHP 80
PP P A Y+ H + P PP VPPP P + P P P Y P P
Sbjct: 462 PPAYGPPAHLPYHPHVYPPNPPPPPVPPP-------PASFPPPAIPPPTPGYPP----PP 510
Query: 81 VRYQPGKYPMPNQSVPITWMPGPTPMANCPPGL 113
Y P +P P +P T P P PPGL
Sbjct: 511 PTYNP-NFPPPPPRLPPTHAVPPHP----PPGL 538
Score = 33.9 bits (76), Expect = 0.20
Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 25/128 (19%)
Query: 9 PEQPAGEME--NQTKPPDPRPDAPPEYNSHFLPGPP---GTAVPPPTGYP------GGLP 57
P+QPA + + Q K P P+P +P + + P A PPP P LP
Sbjct: 307 PQQPAQQQQPAQQPKKPSPQPSSPRQVKRAVVVSPKEENKAAEPPPPKIPKIETTHPPLP 366
Query: 58 MGYYSPQQPSTFPLYQPVGGIHP-----------VRYQPGKYPMP-NQSVPITWMPGPTP 105
+ P + PL +G P V+ P +P P +Q P+ P P P
Sbjct: 367 PAHPPPDRKP--PLAAALGEAEPPGPVDATDLPKVQIPPPAHPAPVHQPPPLPHRPPPPP 424
Query: 106 MANCPPGL 113
++ G+
Sbjct: 425 PSSYMTGM 432
Score = 30.8 bits (68), Expect = 1.7
Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 9/69 (13%)
Query: 40 GPPGTAVPPPTGYPGGLPMGYYSPQQPSTFPLYQPVGGIHPVRYQPGKYPMPNQSVPITW 99
GP A+PP G P LP Y P +Y P PV P +P P P
Sbjct: 455 GPSYGALPPAYGPPAHLP---YHPH------VYPPNPPPPPVPPPPASFPPPAIPPPTPG 505
Query: 100 MPGPTPMAN 108
P P P N
Sbjct: 506 YPPPPPTYN 514
>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 653
Score = 41.2 bits (95), Expect = 0.001
Identities = 28/70 (40%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 3 GVVPTA-PEQPAGEMENQTKPPDP-----RPDAPPEYNSHFLPGPPGTAVPPPTGYPGGL 56
G PT P QP+ T+PP+P RP P E NS PGPPG A P G G
Sbjct: 17 GATPTCTPAQPSWARLRPTRPPEPPSTRQRPPGPRE-NSPVAPGPPGGAAAP--GGAGTT 73
Query: 57 PMGYYSPQQP 66
P G + +P
Sbjct: 74 PQGTATAAKP 83
Score = 30.0 bits (66), Expect = 3.0
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 6/44 (13%)
Query: 40 GPPGTAVPPPTGYPGGLPMGYYSPQQPSTFPLYQPVGGIHPVRY 83
G PG P TG PGGL SP PS P+ P+G P Y
Sbjct: 169 GGPGPGAGPGTGLPGGL-----SPLSPSP-PMGAPLGMHGPAGY 206
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.140 0.461
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,223,944
Number of Sequences: 37866
Number of extensions: 1094155
Number of successful extensions: 9010
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 554
Number of HSP's that attempted gapping in prelim test: 5948
Number of HSP's gapped (non-prelim): 2698
length of query: 329
length of database: 18,247,518
effective HSP length: 103
effective length of query: 226
effective length of database: 14,347,320
effective search space: 3242494320
effective search space used: 3242494320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.