Guide to the Human Genome
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Name: PDCD1LG2 Sequence: fasta or formatted (273aa) NCBI GI: 190014605
Description:

programmed cell death 1 ligand 2

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death
Butyrophilin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         16           2
 C cysteine            2.2          6           1
 D aspartate           2.6          7           1
 E glutamate           6.2         17           2
 F phenylalanine       3.7         10           1
 G glycine             3.3          9           1
 H histidine           3.7         10           1
 I isoleucine          7.3         20           3
 K lysine              5.1         14           1
 L leucine            11.7         32           3
 M methionine          1.1          3           1
 N asparagine          3.7         10           1
 P proline             5.9         16           3
 Q glutamine           5.1         14           1
 R arginine            4.4         12           1
 S serine              6.6         18           2
 T threonine           9.2         25           3
 V valine              7.7         21           1
 W tryptophan          1.5          4           1
 Y tyrosine            3.3          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   programmed cell death 1 ligand 2 
CD274                 0.237   CD274 molecule 
CD276                 0.087   CD276 antigen isoform a 
BTN3A2                0.087   butyrophilin, subfamily 3, member A2 precursor [Homo...
BTN1A1                0.085   butyrophilin, subfamily 1, member A1 
CD276                 0.085   CD276 antigen isoform b 
BTN3A3                0.080   butyrophilin, subfamily 3, member A3 isoform a 
BTN3A3                0.066   butyrophilin, subfamily 3, member A3 isoform b [Homo...
BTN3A1                0.065   butyrophilin, subfamily 3, member A1 isoform b [Homo...
BTN3A1                0.065   butyrophilin, subfamily 3, member A1 isoform d [Hom...
BTN3A1                0.065   butyrophilin, subfamily 3, member A1 isoform a [Homo...
BTN2A2                0.055   butyrophilin, subfamily 2, member A2 isoform a 
ICOSLG                0.053   inducible T-cell co-stimulator ligand 
BTN2A1                0.049   butyrophilin, subfamily 2, member A1 isoform 1 precur...
BTN2A1                0.049   butyrophilin, subfamily 2, member A1 isoform 2 precu...
LRIG1                 0.038   leucine-rich repeats and immunoglobulin-like domains...
HMCN2                 0.034   PREDICTED: hemicentin 2 
HMCN2                 0.034   PREDICTED: hemicentin 2 
HMCN2                 0.034   PREDICTED: hemicentin 2 
HMCN1                 0.034   hemicentin 1 
CADM2                 0.034   immunoglobulin superfamily, member 4D 
BTN3A1                0.034   butyrophilin, subfamily 3, member A1 isoform c [Hom...
HSPG2                 0.032   heparan sulfate proteoglycan 2 
VTCN1                 0.030   V-set domain containing T cell activation inhibitor ...
MUSK                  0.030   skeletal muscle receptor tyrosine kinase 
CD80                  0.028   CD80 antigen precursor 
CD200                 0.028   CD200 antigen isoform b 
CD200                 0.028   CD200 antigen isoform a precursor 
TAPBPL                0.028   TAP binding protein-like 
MXRA5                 0.028   adlican 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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