Guide to the Human Genome
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Name: MUSK Sequence: fasta or formatted (869aa) NCBI GI: 5031927
Description:

skeletal muscle receptor tyrosine kinase

Referenced in:

Muscle
Neurons
Receptor Tyrosine Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         67           3
 C cysteine            3.5         30           2
 D aspartate           3.3         29           2
 E glutamate           7.1         62           2
 F phenylalanine       3.1         27           1
 G glycine             4.5         39           2
 H histidine           2.0         17           1
 I isoleucine          5.6         49           2
 K lysine              5.2         45           2
 L leucine             9.8         85           3
 M methionine          3.0         26           1
 N asparagine          4.5         39           2
 P proline             6.8         59           3
 Q glutamine           2.3         20           1
 R arginine            5.2         45           3
 S serine              8.2         71           6
 T threonine           5.4         47           2
 V valine              7.7         67           2
 W tryptophan          1.4         12           1
 Y tyrosine            3.8         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   skeletal muscle receptor tyrosine kinase 
ROR1                  0.159   receptor tyrosine kinase-like orphan receptor 1 iso...
ROR2                  0.159   receptor tyrosine kinase-like orphan receptor 2 prec...
NTRK2                 0.152   neurotrophic tyrosine kinase, receptor, type 2 isofo...
NTRK2                 0.152   neurotrophic tyrosine kinase, receptor, type 2 isofo...
NTRK1                 0.150   neurotrophic tyrosine kinase, receptor, type 1 isofo...
NTRK1                 0.150   neurotrophic tyrosine kinase, receptor, type 1 isofor...
NTRK1                 0.150   neurotrophic tyrosine kinase, receptor, type 1 isofo...
NTRK3                 0.143   neurotrophic tyrosine kinase, receptor, type 3 isofo...
NTRK3                 0.138   neurotrophic tyrosine kinase, receptor, type 3 isofo...
INSR                  0.129   insulin receptor isoform Short precursor 
INSR                  0.129   insulin receptor isoform Long precursor 
IGF1R                 0.128   insulin-like growth factor 1 receptor precursor [Homo...
INSRR                 0.124   insulin receptor-related receptor precursor 
FGFR4                 0.120   fibroblast growth factor receptor 4 isoform 2 precur...
FGFR4                 0.120   fibroblast growth factor receptor 4 isoform 1 precur...
FGFR4                 0.120   fibroblast growth factor receptor 4 isoform 1 precur...
RET                   0.118   ret proto-oncogene isoform c 
RET                   0.118   ret proto-oncogene isoform a 
ALK                   0.116   anaplastic lymphoma kinase 
DDR2                  0.116   discoidin domain receptor family, member 2 precursor...
DDR2                  0.116   discoidin domain receptor family, member 2 precursor...
DDR1                  0.116   discoidin domain receptor family, member 1 isoform b...
DDR1                  0.116   discoidin domain receptor family, member 1 isoform a...
FGFR3                 0.112   fibroblast growth factor receptor 3 isoform 3 precu...
FGFR3                 0.112   fibroblast growth factor receptor 3 isoform 2 precur...
FGFR3                 0.112   fibroblast growth factor receptor 3 isoform 1 precurs...
DDR1                  0.112   discoidin domain receptor family, member 1 isoform c...
FGFR1                 0.111   fibroblast growth factor receptor 1 isoform 4 precur...
FGFR1                 0.111   fibroblast growth factor receptor 1 isoform 3 precur...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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