Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: BTN3A3 Sequence: fasta or formatted (542aa) NCBI GI: 37574628
Description:

butyrophilin, subfamily 3, member A3 isoform b

Referenced in:

Butyrophilin Family

Other entries for this name:
alt prot [584aa] butyrophilin, subfamily 3, member A3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         46           2
 C cysteine            1.5          8           1
 D aspartate           4.8         26           1
 E glutamate           9.4         51           2
 F phenylalanine       2.6         14           2
 G glycine             7.0         38           3
 H histidine           2.2         12           1
 I isoleucine          4.8         26           2
 K lysine              5.2         28           2
 L leucine             9.6         52           4
 M methionine          1.8         10           1
 N asparagine          2.8         15           1
 P proline             6.5         35           2
 Q glutamine           3.0         16           2
 R arginine            5.7         31           1
 S serine              7.2         39           3
 T threonine           5.5         30           2
 V valine              5.9         32           2
 W tryptophan          2.2         12           1
 Y tyrosine            3.9         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   butyrophilin, subfamily 3, member A3 isoform b [Homo... 
BTN3A3                1.000   butyrophilin, subfamily 3, member A3 isoform a 
BTN3A1                0.747   butyrophilin, subfamily 3, member A1 isoform a [Homo...
BTN3A1                0.631   butyrophilin, subfamily 3, member A1 isoform c [Hom...
BTN3A2                0.459   butyrophilin, subfamily 3, member A2 precursor [Homo...
BTN3A1                0.450   butyrophilin, subfamily 3, member A1 isoform b [Homo...
BTN3A1                0.449   butyrophilin, subfamily 3, member A1 isoform d [Hom...
BTN1A1                0.368   butyrophilin, subfamily 1, member A1 
BTN2A1                0.330   butyrophilin, subfamily 2, member A1 isoform 1 precur...
BTN2A2                0.327   butyrophilin, subfamily 2, member A2 isoform a 
BTNL9                 0.306   butyrophilin-like 9 
BTN2A2                0.242   butyrophilin, subfamily 2, member A2 isoform b [Homo...
BTNL3                 0.229   butyrophilin-like 3 
BTNL8                 0.216   butyrophilin-like 8 isoform 2 precursor 
BTN2A1                0.181   butyrophilin, subfamily 2, member A1 isoform 2 precu...
ERMAP                 0.176   erythroblast membrane-associated protein precursor [...
ERMAP                 0.176   erythroblast membrane-associated protein precursor [...
TRIM11                0.144   tripartite motif-containing 11 
TRIM68                0.142   ring finger protein 137 
TRIM39                0.141   tripartite motif-containing 39 isoform 2 
TRIM39                0.141   tripartite motif-containing 39 isoform 1 
TRIM27                0.140   ret finger protein 
BTNL8                 0.139   butyrophilin-like 8 isoform 3 precursor 
BTNL8                 0.139   butyrophilin-like 8 isoform 5 
TRIM58                0.133   tripartite motif-containing 58 
MEFV                  0.131   Mediterranean fever protein 
TRIM38                0.130   tripartite motif-containing 38 
TRIML1                0.124   tripartite motif family-like 1 
BTNL2                 0.122   butyrophilin-like 2 
TRIM21                0.120   tripartite motif protein 21 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press