Guide to the Human Genome
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Name: BTN3A1 Sequence: fasta or formatted (461aa) NCBI GI: 222418658
Description:

butyrophilin, subfamily 3, member A1 isoform c

Referenced in:

Butyrophilin Family

Other entries for this name:
alt prot [378aa] butyrophilin, subfamily 3, member A1 isoform d
alt prot [352aa] butyrophilin, subfamily 3, member A1 isoform b
alt prot [513aa] butyrophilin, subfamily 3, member A1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         35           2
 C cysteine            1.7          8           1
 D aspartate           4.6         21           1
 E glutamate           6.7         31           2
 F phenylalanine       4.3         20           2
 G glycine             6.7         31           2
 H histidine           2.0          9           1
 I isoleucine          3.9         18           1
 K lysine              6.3         29           3
 L leucine            11.5         53           5
 M methionine          2.4         11           1
 N asparagine          2.6         12           1
 P proline             4.8         22           2
 Q glutamine           3.9         18           3
 R arginine            6.1         28           1
 S serine              7.6         35           3
 T threonine           5.0         23           1
 V valine              6.7         31           2
 W tryptophan          2.4         11           1
 Y tyrosine            3.3         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   butyrophilin, subfamily 3, member A1 isoform c [Hom... 
BTN3A1                0.973   butyrophilin, subfamily 3, member A1 isoform a [Homo...
BTN3A3                0.818   butyrophilin, subfamily 3, member A3 isoform a 
BTN3A3                0.749   butyrophilin, subfamily 3, member A3 isoform b [Homo...
BTN3A1                0.571   butyrophilin, subfamily 3, member A1 isoform b [Homo...
BTN3A1                0.570   butyrophilin, subfamily 3, member A1 isoform d [Hom...
BTN3A2                0.427   butyrophilin, subfamily 3, member A2 precursor [Homo...
BTN1A1                0.359   butyrophilin, subfamily 1, member A1 
BTN2A2                0.322   butyrophilin, subfamily 2, member A2 isoform a 
BTN2A1                0.320   butyrophilin, subfamily 2, member A1 isoform 1 precur...
BTNL9                 0.288   butyrophilin-like 9 
BTN2A2                0.224   butyrophilin, subfamily 2, member A2 isoform b [Homo...
ERMAP                 0.214   erythroblast membrane-associated protein precursor [...
ERMAP                 0.214   erythroblast membrane-associated protein precursor [...
BTNL3                 0.208   butyrophilin-like 3 
BTNL8                 0.202   butyrophilin-like 8 isoform 2 precursor 
TRIM39                0.167   tripartite motif-containing 39 isoform 2 
TRIM39                0.167   tripartite motif-containing 39 isoform 1 
TRIM11                0.165   tripartite motif-containing 11 
TRIM27                0.164   ret finger protein 
TRIM58                0.159   tripartite motif-containing 58 
TRIM68                0.159   ring finger protein 137 
MEFV                  0.155   Mediterranean fever protein 
BTN2A1                0.148   butyrophilin, subfamily 2, member A1 isoform 2 precu...
TRIM38                0.142   tripartite motif-containing 38 
TRIML1                0.141   tripartite motif family-like 1 
TRIM21                0.138   tripartite motif protein 21 
RFPL1                 0.132   ret finger protein-like 1 
RFPL2                 0.132   ret finger protein-like 2 isoform 3 
RFPL2                 0.132   ret finger protein-like 2 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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