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Search of human proteins with 189491632
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|189491632 upstream binding protein 1 (LBP-1a) isoform b
[Homo sapiens]
(504 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|189491632 upstream binding protein 1 (LBP-1a) isoform b [Homo... 1021 0.0
gi|189491634 upstream binding protein 1 (LBP-1a) isoform a [Homo... 1003 0.0
gi|189491630 upstream binding protein 1 (LBP-1a) isoform a [Homo... 1003 0.0
gi|21361278 transcription factor CP2 [Homo sapiens] 752 0.0
gi|7657299 LBP-9 [Homo sapiens] 647 0.0
gi|239735569 grainyhead-like 1 [Homo sapiens] 106 6e-23
gi|170784817 transcription factor CP2-like 3 [Homo sapiens] 102 6e-22
gi|38049009 sister-of-mammalian grainyhead protein isoform 2 [Ho... 98 2e-20
gi|42789723 sister-of-mammalian grainyhead protein isoform 3 [Ho... 98 2e-20
gi|38049007 sister-of-mammalian grainyhead protein isoform 1 [Ho... 98 2e-20
gi|55742695 sterile alpha motif domain containing 4B [Homo sapiens] 37 0.055
gi|187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens] 34 0.27
gi|31044440 K+ channel tetramerization protein [Homo sapiens] 34 0.36
gi|32490557 poly(A) polymerase alpha [Homo sapiens] 33 0.46
gi|29789379 sphingomyelin synthase 1 [Homo sapiens] 33 0.61
gi|216547575 Fas apoptotic inhibitory molecule 3 isoform a [Homo... 33 0.61
gi|4885641 Fas apoptotic inhibitory molecule 3 isoform a [Homo s... 33 0.61
gi|188497758 ubiquitin associated protein 2-like isoform a [Homo... 33 0.61
gi|188497756 ubiquitin associated protein 2-like isoform b [Homo... 33 0.61
gi|239751284 PREDICTED: hypothetical protein XP_002347797 [Homo ... 33 0.79
gi|55741677 SET domain containing 1A [Homo sapiens] 33 0.79
gi|21264616 epidermal growth factor receptor pathway substrate 8... 33 0.79
gi|209862789 microtubule associated monoxygenase, calponin and L... 33 0.79
gi|93352554 GPR158-like 1 [Homo sapiens] 33 0.79
gi|17136078 VGF nerve growth factor inducible precursor [Homo sa... 32 1.0
gi|9789865 eukaryotic translation initiation factor 4E nuclear i... 32 1.0
gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo sa... 32 1.0
gi|155722987 elongation factor, RNA polymerase II, 2 [Homo sapiens] 32 1.0
gi|239757574 PREDICTED: hypothetical protein [Homo sapiens] 32 1.4
gi|239752084 PREDICTED: hypothetical protein [Homo sapiens] 32 1.4
>gi|189491632 upstream binding protein 1 (LBP-1a) isoform b [Homo
sapiens]
Length = 504
Score = 1021 bits (2641), Expect = 0.0
Identities = 504/504 (100%), Positives = 504/504 (100%)
Query: 1 MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE 60
MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE
Sbjct: 1 MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE 60
Query: 61 HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV 120
HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV
Sbjct: 61 HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV 120
Query: 121 FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT 180
FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT
Sbjct: 121 FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT 180
Query: 181 SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA 240
SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA
Sbjct: 181 SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA 240
Query: 241 DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAPTAYVNNSPSPAPTFTSPQQ 300
DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAPTAYVNNSPSPAPTFTSPQQ
Sbjct: 241 DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAPTAYVNNSPSPAPTFTSPQQ 300
Query: 301 STCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGAD 360
STCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGAD
Sbjct: 301 STCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGAD 360
Query: 361 LLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASE 420
LLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASE
Sbjct: 361 LLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASE 420
Query: 421 NGSGAPYVYHAIYLEEMIASEVARKLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNF 480
NGSGAPYVYHAIYLEEMIASEVARKLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNF
Sbjct: 421 NGSGAPYVYHAIYLEEMIASEVARKLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNF 480
Query: 481 QDESCFLFSTVKAESSDGIHIILK 504
QDESCFLFSTVKAESSDGIHIILK
Sbjct: 481 QDESCFLFSTVKAESSDGIHIILK 504
>gi|189491634 upstream binding protein 1 (LBP-1a) isoform a [Homo
sapiens]
Length = 540
Score = 1003 bits (2594), Expect = 0.0
Identities = 504/540 (93%), Positives = 504/540 (93%), Gaps = 36/540 (6%)
Query: 1 MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE 60
MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE
Sbjct: 1 MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE 60
Query: 61 HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV 120
HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV
Sbjct: 61 HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV 120
Query: 121 FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT 180
FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT
Sbjct: 121 FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT 180
Query: 181 SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA 240
SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA
Sbjct: 181 SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA 240
Query: 241 DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTE--------------------------- 273
DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTE
Sbjct: 241 DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADY 300
Query: 274 ---------CSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS 324
CSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS
Sbjct: 301 GDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS 360
Query: 325 GEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS 384
GEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS
Sbjct: 361 GEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS 420
Query: 385 LKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVAR 444
LKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVAR
Sbjct: 421 LKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVAR 480
Query: 445 KLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK 504
KLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK
Sbjct: 481 KLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK 540
>gi|189491630 upstream binding protein 1 (LBP-1a) isoform a [Homo
sapiens]
Length = 540
Score = 1003 bits (2594), Expect = 0.0
Identities = 504/540 (93%), Positives = 504/540 (93%), Gaps = 36/540 (6%)
Query: 1 MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE 60
MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE
Sbjct: 1 MAWVLKMDEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDGETE 60
Query: 61 HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV 120
HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV
Sbjct: 61 HPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVV 120
Query: 121 FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT 180
FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT
Sbjct: 121 FHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRT 180
Query: 181 SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA 240
SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA
Sbjct: 181 SAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGA 240
Query: 241 DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTE--------------------------- 273
DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTE
Sbjct: 241 DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADY 300
Query: 274 ---------CSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS 324
CSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS
Sbjct: 301 GDSLAKRGSCSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS 360
Query: 325 GEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS 384
GEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS
Sbjct: 361 GEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNS 420
Query: 385 LKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVAR 444
LKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVAR
Sbjct: 421 LKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVAR 480
Query: 445 KLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK 504
KLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK
Sbjct: 481 KLALVFNIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK 540
>gi|21361278 transcription factor CP2 [Homo sapiens]
Length = 502
Score = 752 bits (1942), Expect = 0.0
Identities = 373/509 (73%), Positives = 430/509 (84%), Gaps = 12/509 (2%)
Query: 1 MAWVLKM---DEVIESGLVHDFDASLSGIGQELGAGAYSMSDVLALPIFKQEDSSLPLDG 57
MAW LK+ DEVIESGLV DFDASLSGIGQELGAGAYSMSDVLALPIFKQE+SSLP D
Sbjct: 1 MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESSLPPDN 60
Query: 58 ETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSII 117
E + PFQYV+CAATSPAVKLHDETLTYLNQGQSYEIRMLDNRK+G++PEINGKLVKSI
Sbjct: 61 ENKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKLGELPEINGKLVKSIF 120
Query: 118 RVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPA 177
RVVFHDRRLQYTEHQQLEGW+WNRPGDR+LD+DIPMSVGIID R NP+QLN VEFLWDPA
Sbjct: 121 RVVFHDRRLQYTEHQQLEGWRWNRPGDRILDIDIPMSVGIIDPRANPTQLNTVEFLWDPA 180
Query: 178 KRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKP 237
KRTS FIQVHCISTEFT RKHGGEKGVPFR+Q+DTFK+NENGEYT+HLHSASCQIKVFKP
Sbjct: 181 KRTSVFIQVHCISTEFTMRKHGGEKGVPFRVQIDTFKENENGEYTEHLHSASCQIKVFKP 240
Query: 238 KGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAPTAYVNNSPSPAPTFTS 297
KGADRKQKTDREKMEKRT HEKEKYQPSY+TTILTECSPWP+ YVNNSPSP F S
Sbjct: 241 KGADRKQKTDREKMEKRTPHEKEKYQPSYETTILTECSPWPE--ITYVNNSPSPG--FNS 296
Query: 298 PQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNFS 357
S+ S+ + N SPNHQ + + + + P+ T QE QQWL +NRFS++TRLF+NFS
Sbjct: 297 -SHSSFSLGEGN-GSPNHQPEPPPPVT-DNLLPTTTPQEAQQWLHRNRFSTFTRLFTNFS 353
Query: 358 GADLLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASS 417
GADLLKLT++D++QICG ADGIRL+N+LK R VRPRLTIYVC+E Q QQQ
Sbjct: 354 GADLLKLTRDDVIQICGPADGIRLFNALKGRMVRPRLTIYVCQESLQLREQQQQQQQQQQ 413
Query: 418 ASENG--SGAPYVYHAIYLEEMIASEVARKLALVFNIPLHQINQVYRQGPTGIHILVSDQ 475
E+G +G +VYHAIYLEE+ A E+ K+A +F+I QI+Q+Y+QGPTGIH+L+SD+
Sbjct: 414 KHEDGDSNGTFFVYHAIYLEELTAVELTEKIAQLFSISPCQISQIYKQGPTGIHVLISDE 473
Query: 476 MVQNFQDESCFLFSTVKAESSDGIHIILK 504
M+QNFQ+E+CF+ T+KAE++D HIILK
Sbjct: 474 MIQNFQEEACFILDTMKAETNDSYHIILK 502
>gi|7657299 LBP-9 [Homo sapiens]
Length = 479
Score = 647 bits (1670), Expect = 0.0
Identities = 321/474 (67%), Positives = 392/474 (82%), Gaps = 14/474 (2%)
Query: 32 AGAYSMSDVLALPIFKQEDSSLPLDGETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQS 91
+G+Y + DVLALPIFKQE+ L + E PP QYV+CAATSPAVKLH+ETLTYLNQGQS
Sbjct: 16 SGSY-LRDVLALPIFKQEEPQLSPENEARLPPLQYVLCAATSPAVKLHEETLTYLNQGQS 74
Query: 92 YEIRMLDNRKMGDMPEINGKLVKSIIRVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDI 151
YEIR+L+NRK+GD ++N K VKSIIRVVFHDRRLQYTEHQQLEGW+W+RPGDR+LD+DI
Sbjct: 75 YEIRLLENRKLGDFQDLNTKYVKSIIRVVFHDRRLQYTEHQQLEGWRWSRPGDRILDIDI 134
Query: 152 PMSVGIIDTRTNPSQLNAVEFLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVD 211
P+SVGI+D R +P+QLNAVEFLWDPAKR SAFIQVHCISTEFTPRKHGGEKGVPFR+Q+D
Sbjct: 135 PLSVGILDPRASPTQLNAVEFLWDPAKRASAFIQVHCISTEFTPRKHGGEKGVPFRVQID 194
Query: 212 TFKQNENGEYTDHLHSASCQIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTIL 271
TFKQNENGEYT+HLHSASCQIKVFKPKGADRKQKTDREKMEKRTA EKEKYQPSY+TTIL
Sbjct: 195 TFKQNENGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTAQEKEKYQPSYETTIL 254
Query: 272 TECSPWPDAPTAY-VNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQP 330
TECSPWPD AY VN++PSP+ + ++ + + N +SP H + A + + P
Sbjct: 255 TECSPWPD--VAYQVNSAPSPS---YNGSPNSFGLGEGN-ASPTHPVE-ALPVGSDHLLP 307
Query: 331 SATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNSLKSRSV 390
SA+IQ+ QQWL +NRFS + RLF++FSGADLLK++++DLVQICG ADGIRL+N++K R+V
Sbjct: 308 SASIQDAQQWLHRNRFSQFCRLFASFSGADLLKMSRDDLVQICGPADGIRLFNAIKGRNV 367
Query: 391 RPRLTIYVCREQPSSTVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVARKLALVF 450
RP++TIYVC+E + V QQ+ S N S VYHAI+LEE+ E+ K+A ++
Sbjct: 368 RPKMTIYVCQELEQNRV-PLQQKRDGSGDSNLS----VYHAIFLEELTTLELIEKIANLY 422
Query: 451 NIPLHQINQVYRQGPTGIHILVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK 504
+I I++VYRQGPTGIH++VS++MVQNFQDESCF+ ST+KAES+DG HIILK
Sbjct: 423 SISPQHIHRVYRQGPTGIHVVVSNEMVQNFQDESCFVLSTIKAESNDGYHIILK 476
>gi|239735569 grainyhead-like 1 [Homo sapiens]
Length = 618
Score = 106 bits (264), Expect = 6e-23
Identities = 82/260 (31%), Positives = 128/260 (49%), Gaps = 13/260 (5%)
Query: 64 FQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLVKSIIRVVFHD 123
F+Y + A+ S K D T+TYLN+GQ Y I + + + K V+S+I VVF +
Sbjct: 252 FEYTLEASKSLRQKPGDSTMTYLNKGQFYPITLKEVSSSEGIHHPISK-VRSVIMVVFAE 310
Query: 124 RRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQL--NAVEFLWDPAKRTS 181
+ + + + + W + + +DI +T +N ++ NA+ F WD
Sbjct: 311 DKSREDQLRHWKYWHSRQHTAKQRCIDIADYKESFNTISNIEEIAYNAISFTWDINDEAK 370
Query: 182 AFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGAD 241
FI V+C+ST+F+ +K G KG+P IQVDT+ N +H A CQIKVF KGA+
Sbjct: 371 VFISVNCLSTDFSSQK--GVKGLPLNIQVDTYSYNNRSNKP--VHRAYCQIKVFCDKGAE 426
Query: 242 RKQKTDREKMEKRTAHE-KEKYQPSYDTTILTECSPWPDAPTAYVNNSPSPAPTFTSPQQ 300
RK + + K KR + K PS+ +T P+ D T V P F + Q+
Sbjct: 427 RKIRDEERKQSKRKVSDVKVPLLPSHKRMDITVFKPFIDLDTQPVLFIPD--VHFANLQR 484
Query: 301 STCSVPDSNSSSPNHQGDGA 320
T +P +S +G+G+
Sbjct: 485 GTHVLP---IASEELEGEGS 501
>gi|170784817 transcription factor CP2-like 3 [Homo sapiens]
Length = 625
Score = 102 bits (255), Expect = 6e-22
Identities = 110/445 (24%), Positives = 183/445 (41%), Gaps = 89/445 (20%)
Query: 58 ETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKL--VKS 115
+T FQY + A S K + +TYLN+GQ Y I + + GD + V+S
Sbjct: 242 QTSSGTFQYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSET---GDNKCFRHPISKVRS 298
Query: 116 IIRVVFHDRRLQYTEHQQLEGWKW-----NRPGDRLLDL-DIPMSVGIIDTRTNPSQLNA 169
++ VVF + + +QL+ WK+ + R+LD+ D S I NA
Sbjct: 299 VVMVVFSEDK---NRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGN-IEEIAYNA 354
Query: 170 VEFLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSAS 229
V F WD + FI V+C+ST+F+ +K G KG+P IQ+DT+ N +H A
Sbjct: 355 VSFTWDVNEEAKIFITVNCLSTDFSSQK--GVKGLPLMIQIDTYSYNNRS--NKPIHRAY 410
Query: 230 CQIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAPTAYVNNSP 289
CQIKVF KGA+RK + + K ++ K K Q S T+C+ D A +
Sbjct: 411 CQIKVFCDKGAERKIRDEERKQNRK----KGKGQASQ-----TQCNSSSDGKLAAIPLQK 461
Query: 290 SPAPTF--TSP---QQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKN 344
T+ T P Q +PD + ++ G T E +E L+K
Sbjct: 462 KSDITYFKTMPDLHSQPVLFIPDVHFANLQRTGQVYYNTDDE--------REGGSVLVKR 513
Query: 345 RFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVCREQPS 404
F F G K KE+ + R+ +YV +E
Sbjct: 514 MFRPMEEEF----GPVPSKQMKEEGTK---------------------RVLLYVRKETDD 548
Query: 405 STVLQGQQQAASSASENGSGAPYVYHAIYLEEMIASEVARKLALVFNIPLHQINQVYRQG 464
V+ A+ L+ + ++ + +P+ +I ++Y++
Sbjct: 549 -----------------------VFDALMLKSPTVKGLMEAISEKYGLPVEKIAKLYKKS 585
Query: 465 PTGIHILVSDQMVQNFQDESCFLFS 489
GI + + D +++++ +E F+ +
Sbjct: 586 KKGILVNMDDNIIEHYSNEDTFILN 610
>gi|38049009 sister-of-mammalian grainyhead protein isoform 2 [Homo
sapiens]
Length = 602
Score = 97.8 bits (242), Expect = 2e-20
Identities = 107/454 (23%), Positives = 185/454 (40%), Gaps = 77/454 (16%)
Query: 54 PLDGETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLV 113
P D + F+Y + + + +K + + YLN+GQ Y + L G ++ V
Sbjct: 221 PEDYPSLKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVT-LRTPAGGKGLALSSNKV 279
Query: 114 KSIIRVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQL--NAVE 171
KS++ VVF + ++ + + + W +P + +D+ +T + ++ NA+
Sbjct: 280 KSVVMVVFDNEKVPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEVAYNALS 339
Query: 172 FLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHL-HSASC 230
F+W+ + FI V+C+ST+F+ +K G KGVP +Q+DT+ + G T+ L H A C
Sbjct: 340 FVWNVNEEAKVFIGVNCLSTDFSSQK--GVKGVPLNLQIDTY---DCGLGTERLVHRAVC 394
Query: 231 QIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAPTAYVNNSPS 290
QIK+F KGA+RK + D K +R + +L S + T Y+
Sbjct: 395 QIKIFCDKGAERKMRDDERKQFRRKVKCPDSSNSGVKGCLL---SGFRGNETTYLR---- 447
Query: 291 PAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYT 350
P +P +P+ + SS G A PSA + + LK S +T
Sbjct: 448 PETDLETP--PVLFIPNVHFSSLQRSGGAA---------PSAGPSSSNRLPLKRTCSPFT 496
Query: 351 RLFSNFSGADLLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQG 410
F K KE +Q R+ +YV RE
Sbjct: 497 EEFEPLPS----KQAKEGDLQ---------------------RVLLYVRRETEE------ 525
Query: 411 QQQAASSASENGSGAPYVYHAIYLEEMIASEVARKLALVFNIPLHQINQVYRQGPTGIHI 470
V+ A+ L+ + ++ + P I +VY++ GI +
Sbjct: 526 -----------------VFDALMLKTPDLKGLRNAISEKYGFPEENIYKVYKKCKRGILV 568
Query: 471 LVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK 504
+ + ++Q++ + FL E I IILK
Sbjct: 569 NMDNNIIQHYSNHVAFLLD--MGELDGKIQIILK 600
>gi|42789723 sister-of-mammalian grainyhead protein isoform 3 [Homo
sapiens]
Length = 509
Score = 97.8 bits (242), Expect = 2e-20
Identities = 107/454 (23%), Positives = 185/454 (40%), Gaps = 77/454 (16%)
Query: 54 PLDGETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLV 113
P D + F+Y + + + +K + + YLN+GQ Y + L G ++ V
Sbjct: 128 PEDYPSLKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVT-LRTPAGGKGLALSSNKV 186
Query: 114 KSIIRVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQL--NAVE 171
KS++ VVF + ++ + + + W +P + +D+ +T + ++ NA+
Sbjct: 187 KSVVMVVFDNEKVPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEVAYNALS 246
Query: 172 FLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHL-HSASC 230
F+W+ + FI V+C+ST+F+ +K G KGVP +Q+DT+ + G T+ L H A C
Sbjct: 247 FVWNVNEEAKVFIGVNCLSTDFSSQK--GVKGVPLNLQIDTY---DCGLGTERLVHRAVC 301
Query: 231 QIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAPTAYVNNSPS 290
QIK+F KGA+RK + D K +R + +L S + T Y+
Sbjct: 302 QIKIFCDKGAERKMRDDERKQFRRKVKCPDSSNSGVKGCLL---SGFRGNETTYLR---- 354
Query: 291 PAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYT 350
P +P +P+ + SS G A PSA + + LK S +T
Sbjct: 355 PETDLETP--PVLFIPNVHFSSLQRSGGAA---------PSAGPSSSNRLPLKRTCSPFT 403
Query: 351 RLFSNFSGADLLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQG 410
F K KE +Q R+ +YV RE
Sbjct: 404 EEFEPLPS----KQAKEGDLQ---------------------RVLLYVRRETEE------ 432
Query: 411 QQQAASSASENGSGAPYVYHAIYLEEMIASEVARKLALVFNIPLHQINQVYRQGPTGIHI 470
V+ A+ L+ + ++ + P I +VY++ GI +
Sbjct: 433 -----------------VFDALMLKTPDLKGLRNAISEKYGFPEENIYKVYKKCKRGILV 475
Query: 471 LVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK 504
+ + ++Q++ + FL E I IILK
Sbjct: 476 NMDNNIIQHYSNHVAFLLD--MGELDGKIQIILK 507
>gi|38049007 sister-of-mammalian grainyhead protein isoform 1 [Homo
sapiens]
Length = 607
Score = 97.8 bits (242), Expect = 2e-20
Identities = 107/454 (23%), Positives = 185/454 (40%), Gaps = 77/454 (16%)
Query: 54 PLDGETEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPEINGKLV 113
P D + F+Y + + + +K + + YLN+GQ Y + L G ++ V
Sbjct: 226 PEDYPSLKSDFEYTLGSPKAIHIKSGESPMAYLNKGQFYPVT-LRTPAGGKGLALSSNKV 284
Query: 114 KSIIRVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQL--NAVE 171
KS++ VVF + ++ + + + W +P + +D+ +T + ++ NA+
Sbjct: 285 KSVVMVVFDNEKVPVEQLRFWKHWHSRQPTAKQRVIDVADCKENFNTVEHIEEVAYNALS 344
Query: 172 FLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHL-HSASC 230
F+W+ + FI V+C+ST+F+ +K G KGVP +Q+DT+ + G T+ L H A C
Sbjct: 345 FVWNVNEEAKVFIGVNCLSTDFSSQK--GVKGVPLNLQIDTY---DCGLGTERLVHRAVC 399
Query: 231 QIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAPTAYVNNSPS 290
QIK+F KGA+RK + D K +R + +L S + T Y+
Sbjct: 400 QIKIFCDKGAERKMRDDERKQFRRKVKCPDSSNSGVKGCLL---SGFRGNETTYLR---- 452
Query: 291 PAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYT 350
P +P +P+ + SS G A PSA + + LK S +T
Sbjct: 453 PETDLETP--PVLFIPNVHFSSLQRSGGAA---------PSAGPSSSNRLPLKRTCSPFT 501
Query: 351 RLFSNFSGADLLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQG 410
F K KE +Q R+ +YV RE
Sbjct: 502 EEFEPLPS----KQAKEGDLQ---------------------RVLLYVRRETEE------ 530
Query: 411 QQQAASSASENGSGAPYVYHAIYLEEMIASEVARKLALVFNIPLHQINQVYRQGPTGIHI 470
V+ A+ L+ + ++ + P I +VY++ GI +
Sbjct: 531 -----------------VFDALMLKTPDLKGLRNAISEKYGFPEENIYKVYKKCKRGILV 573
Query: 471 LVSDQMVQNFQDESCFLFSTVKAESSDGIHIILK 504
+ + ++Q++ + FL E I IILK
Sbjct: 574 NMDNNIIQHYSNHVAFLLD--MGELDGKIQIILK 605
>gi|55742695 sterile alpha motif domain containing 4B [Homo sapiens]
Length = 694
Score = 36.6 bits (83), Expect = 0.055
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 295 FTSPQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFS 354
FT+P + S S +SS + Q + + + + +++ WL R Y LFS
Sbjct: 262 FTTPDHAPLSPQSSVASSGSEQTEEQGSSRNTFQEDGSGMKDVPSWLKSLRLHKYAALFS 321
Query: 355 NFSGADLLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVCREQPSSTVLQG 410
S +++ LT++ L + G R +L + +R R ++ E+ VL+G
Sbjct: 322 QMSYEEMMTLTEQHL-ESQNVTKGARHKIALSIQKLRERQSVLKSLEK---DVLEG 373
>gi|187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens]
Length = 1378
Score = 34.3 bits (77), Expect = 0.27
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 278 PDAPTAYVNNSPSPA-PTFTSPQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQE 336
P+A A+V SP A P P++S S+SSS G ++ S ++ + SAT Q
Sbjct: 709 PEASQAHVRVSPGQAAPAMARPRRSRHGPASSSSSSEGEDSAGPARPSQKRPRCSATAQR 768
Query: 337 TQQW 340
W
Sbjct: 769 VAAW 772
>gi|31044440 K+ channel tetramerization protein [Homo sapiens]
Length = 475
Score = 33.9 bits (76), Expect = 0.36
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 20/101 (19%)
Query: 238 KGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAPTA---------YVNNS 288
+ DR++ +DR + ++HE+ + Q LT C +PT + ++
Sbjct: 60 RSRDRRRSSDRSR---DSSHERTESQ-------LTPCIRNVTSPTRQHHVEREKDHSSSR 109
Query: 289 PS-PAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTSGEQI 328
PS P P SP S S +S+ +S DG+ +T+GE +
Sbjct: 110 PSSPRPQKASPNGSISSAGNSSRNSSQSSSDGSCKTAGEMV 150
>gi|32490557 poly(A) polymerase alpha [Homo sapiens]
Length = 745
Score = 33.5 bits (75), Expect = 0.46
Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 18/121 (14%)
Query: 225 LHSASCQIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDT---------TILTECS 275
+H Q+ P +K+K + K TA S D+ T T+ S
Sbjct: 486 MHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTS 545
Query: 276 PWPDAPTAYVNNSPSPAPT---FTSPQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSA 332
P + ++ NSP+PA T T+ Q + SVP NSS + + TS E I +A
Sbjct: 546 PLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQVNSS------ESSGGTSSESIPQTA 599
Query: 333 T 333
T
Sbjct: 600 T 600
>gi|29789379 sphingomyelin synthase 1 [Homo sapiens]
Length = 413
Score = 33.1 bits (74), Expect = 0.61
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 335 QETQQWLLKNRFSSYTRLFSNFSGADLLKLTKED 368
++ WLL+N Y +F+G DL+ LT+ED
Sbjct: 10 KKVADWLLENAMPEYCEPLEHFTGQDLINLTQED 43
>gi|216547575 Fas apoptotic inhibitory molecule 3 isoform a [Homo
sapiens]
Length = 390
Score = 33.1 bits (74), Expect = 0.61
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 18/120 (15%)
Query: 246 TDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAP-----TAYVNNSPSPAPTFTSPQQ 300
TDR K +K T + +Y+PS++ + E W P AY ++S T Q+
Sbjct: 110 TDRGKTQKVTLNVHSEYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQR 169
Query: 301 STCSVPDSNSSSPNHQ------GDGASQTSGEQ---IQPSATIQETQ--QWLLKNRFSSY 349
VP + SSP Q AS +G++ PS T + + LLK + SY
Sbjct: 170 G--KVPPVHHSSPTTQITHRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSY 227
>gi|4885641 Fas apoptotic inhibitory molecule 3 isoform a [Homo
sapiens]
Length = 390
Score = 33.1 bits (74), Expect = 0.61
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 18/120 (15%)
Query: 246 TDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAP-----TAYVNNSPSPAPTFTSPQQ 300
TDR K +K T + +Y+PS++ + E W P AY ++S T Q+
Sbjct: 110 TDRGKTQKVTLNVHSEYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQR 169
Query: 301 STCSVPDSNSSSPNHQ------GDGASQTSGEQ---IQPSATIQETQ--QWLLKNRFSSY 349
VP + SSP Q AS +G++ PS T + + LLK + SY
Sbjct: 170 G--KVPPVHHSSPTTQITHRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSY 227
>gi|188497758 ubiquitin associated protein 2-like isoform a [Homo
sapiens]
Length = 1087
Score = 33.1 bits (74), Expect = 0.61
Identities = 31/145 (21%), Positives = 59/145 (40%), Gaps = 10/145 (6%)
Query: 275 SPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATI 334
S + PT ++S +P+ +TS + S SN S + G Q++ + T
Sbjct: 530 SDYESTPTTSASSSQAPSSLYTSTASESSSTISSNQSQESGYQSGPIQST------TYTS 583
Query: 335 QETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRL 394
Q Q L + S+ TR + + + ++DL Q ++ ++SV
Sbjct: 584 QNNAQGPLYEQRSTQTRRYP----SSISSSPQKDLTQAKNGFSSVQATQLQTTQSVEGAT 639
Query: 395 TIYVCREQPSSTVLQGQQQAASSAS 419
V + PS++ + + S+AS
Sbjct: 640 GSAVKSDSPSTSSIPPLNETVSAAS 664
>gi|188497756 ubiquitin associated protein 2-like isoform b [Homo
sapiens]
Length = 983
Score = 33.1 bits (74), Expect = 0.61
Identities = 31/145 (21%), Positives = 59/145 (40%), Gaps = 10/145 (6%)
Query: 275 SPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATI 334
S + PT ++S +P+ +TS + S SN S + G Q++ + T
Sbjct: 530 SDYESTPTTSASSSQAPSSLYTSTASESSSTISSNQSQESGYQSGPIQST------TYTS 583
Query: 335 QETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRL 394
Q Q L + S+ TR + + + ++DL Q ++ ++SV
Sbjct: 584 QNNAQGPLYEQRSTQTRRYP----SSISSSPQKDLTQAKNGFSSVQATQLQTTQSVEGAT 639
Query: 395 TIYVCREQPSSTVLQGQQQAASSAS 419
V + PS++ + + S+AS
Sbjct: 640 GSAVKSDSPSTSSIPPLNETVSAAS 664
>gi|239751284 PREDICTED: hypothetical protein XP_002347797 [Homo
sapiens]
Length = 1674
Score = 32.7 bits (73), Expect = 0.79
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Query: 217 ENGEYTDHLHSASCQIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSP 276
E+GE T H + C + P AD DR++ ++ A + + P
Sbjct: 1252 EDGEKTSHELQSVCPWETTAP--ADSVSHLDRQRPDQPKASSQRLVSTGGRAA---DVCP 1306
Query: 277 WPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQ 322
W D P A V S S A T P + T +P S + +GD +
Sbjct: 1307 W-DVPDAGVYKSDSSAKAETCPWEVTERIPVKGVSRQDGKGDSQEE 1351
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 32.7 bits (73), Expect = 0.79
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 241 DRKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSPWPDAPTAYVNNSPSPAPTFTSPQQ 300
DR++ D K E + +++ S ++CS + D+ N+S S + + +S
Sbjct: 989 DREEAVDTTKKETEVSDGEDEESDSS-----SKCSLYADSDGE--NDSTSDSESSSSSSS 1041
Query: 301 STCSVPDSNSSSPNHQGDGASQTSGEQIQPSA 332
S+ S S+SSS + + +S+ E+ +P+A
Sbjct: 1042 SSSSSSSSSSSSSSSSSESSSEDEEEEERPAA 1073
>gi|21264616 epidermal growth factor receptor pathway substrate
8-like protein 2 [Homo sapiens]
Length = 715
Score = 32.7 bits (73), Expect = 0.79
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 321 SQTSGEQIQPSATIQETQQWLLKNRFSSYTRLFSNF---SGADLLKLTKEDLVQICGAAD 377
SQ + + + E + WL FS R+ N +G L L KE+L ++CG +
Sbjct: 617 SQPVSQPLTYESGPDEVRAWLEAKAFSP--RIVENLGILTGPQLFSLNKEELKKVCG-EE 673
Query: 378 GIRLYNSL 385
G+R+Y+ L
Sbjct: 674 GVRVYSQL 681
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 32.7 bits (73), Expect = 0.79
Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 24/159 (15%)
Query: 225 LHSASCQIKVFKPKGADRKQKTDREKM-----------------EKRTAHEKEKYQP--- 264
+HS S + P A ++K+ E++ + + H + QP
Sbjct: 1171 VHSPSTEGPQLPPVPAATQEKSPEERLFPEPLLPKEKPKADAPSDLKAVHSPIRSQPVTL 1230
Query: 265 SYDTTILTECSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTS 324
T ++ SP P P A PSP P + PQ ST + S + SP ++TS
Sbjct: 1231 PEARTPVSPGSPQPQPPVAASTPPPSPLPICSQPQPSTEATVPSPTQSPIRFQPAPAKTS 1290
Query: 325 GEQIQPSATIQETQQWLLKNRFSSYTRLFSNFSGADLLK 363
P A + Q K+R S + +DL++
Sbjct: 1291 ----TPLAPLPVQSQSDTKDRLGSPLAVDEALRRSDLVE 1325
>gi|93352554 GPR158-like 1 [Homo sapiens]
Length = 2367
Score = 32.7 bits (73), Expect = 0.79
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 6/106 (5%)
Query: 217 ENGEYTDHLHSASCQIKVFKPKGADRKQKTDREKMEKRTAHEKEKYQPSYDTTILTECSP 276
E+GE T H + C + P AD DR++ ++ A + + P
Sbjct: 1945 EDGEKTSHELQSVCPWETTAP--ADSVSHLDRQRPDQPKASSQRLVSTGGRAA---DVCP 1999
Query: 277 WPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQ 322
W D P A V S S A T P + T +P S + +GD +
Sbjct: 2000 W-DVPDAGVYKSDSSAKAETCPWEVTERIPVKGVSRQDGKGDSQEE 2044
>gi|17136078 VGF nerve growth factor inducible precursor [Homo
sapiens]
Length = 615
Score = 32.3 bits (72), Expect = 1.0
Identities = 35/146 (23%), Positives = 54/146 (36%), Gaps = 10/146 (6%)
Query: 191 TEFTPRKHGGEKGVPFRIQVDTF--KQNENGEYTDHLHSASCQIKVFKPKGADRKQKTDR 248
T P E P R Q + ++ E + L S +++ F P A R+Q+T
Sbjct: 123 THSLPAPESPEPAAPPRPQTPENGPEASDPSEELEALASLLQELRDFSPSSAKRQQETAA 182
Query: 249 EKMEKRTAHEKEKYQPSYDTTILTECSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDS 308
+ E RT H + + W + +P P P +P Q +PDS
Sbjct: 183 AETETRT-HTLTRVNLESPGPERVWRASWGEFQARVPERAPLPPP---APSQFQARMPDS 238
Query: 309 NSSSPNHQ-GDGASQTS---GEQIQP 330
H+ G+G S GE + P
Sbjct: 239 GPLPETHKFGEGVSSPKTHLGEALAP 264
>gi|9789865 eukaryotic translation initiation factor 4E nuclear
import factor 1 [Homo sapiens]
Length = 985
Score = 32.3 bits (72), Expect = 1.0
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 11/114 (9%)
Query: 235 FKPKGADRKQKTDREKMEKRTAH-------EKEKYQPSYDTTILTECSPWPDAPTAYVNN 287
F P RK +EK ++ A KE Q + + +L+ S P+A ++
Sbjct: 696 FTPTSVIRKMYESKEKSKEEPASGKAALGDSKEDTQKASEENLLSSSS----VPSADRDS 751
Query: 288 SPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQTSGEQIQPSATIQETQQWL 341
SP+ ++ Q+S+CS P S ++ + D + +G + A+ T +L
Sbjct: 752 SPTTNSKLSALQRSSCSTPLSQANRYTKEQDYRPKATGRKTPTLASPVPTTPFL 805
>gi|40538799 ataxin-1 ubiquitin-like interacting protein [Homo
sapiens]
Length = 601
Score = 32.3 bits (72), Expect = 1.0
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Query: 263 QPSYDTTILTECSPWPDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPNHQGDGASQ 322
Q + D T SP P + + +P+ T P S + D+ S S G G S
Sbjct: 86 QKAQDPAAATASSPSTPDPASAPSTTPASPATPAQPSTSGSASSDAGSGSRRSSGGGPSP 145
Query: 323 TSGEQIQPSAT 333
+GE PSAT
Sbjct: 146 GAGEG-SPSAT 155
>gi|155722987 elongation factor, RNA polymerase II, 2 [Homo sapiens]
Length = 640
Score = 32.3 bits (72), Expect = 1.0
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 278 PDAPTAYVNNSPSPAPTFTSPQQSTCSVPDSNSSSPN-HQGDGASQTSGEQIQPSATIQE 336
P P A +P P P+ P + +SNS+SP+ +G G + + +I E
Sbjct: 364 PLPPAAAAIPTPPPLPSTYLPISHPPQIVNSNSNSPSTPEGRGTQDLPVDSFSQNDSIYE 423
Query: 337 TQQWLLKNRFSSYTRLFSNFSGADLLKLTK 366
QQ ++++S T L + G+ LLK K
Sbjct: 424 DQQ----DKYTSRTSLETLPPGSVLLKCPK 449
>gi|239757574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 152
Score = 32.0 bits (71), Expect = 1.4
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 21/112 (18%)
Query: 310 SSSPNHQGDGASQTSGEQIQ-PSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKED 368
++SP H +G ++ + +Q P QE Q GAD L++
Sbjct: 49 ATSPPHTLEGDARVVDQHVQAPVLLAQEVAQ------------------GADALQIVDVQ 90
Query: 369 LVQICGAADGIRL-YNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSAS 419
LV+ A ++L Y L R V PR +V REQP+ GQ A ++S
Sbjct: 91 LVEARAQALRLQLLYGRLAPRHV-PRREHHVPREQPAQVAHDGQADALVASS 141
>gi|239752084 PREDICTED: hypothetical protein [Homo sapiens]
Length = 152
Score = 32.0 bits (71), Expect = 1.4
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 21/112 (18%)
Query: 310 SSSPNHQGDGASQTSGEQIQ-PSATIQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKED 368
++SP H +G ++ + +Q P QE Q GAD L++
Sbjct: 49 ATSPPHTLEGDARVVDQHVQAPVLLAQEVAQ------------------GADALQIVDVQ 90
Query: 369 LVQICGAADGIRL-YNSLKSRSVRPRLTIYVCREQPSSTVLQGQQQAASSAS 419
LV+ A ++L Y L R V PR +V REQP+ GQ A ++S
Sbjct: 91 LVEARAQALRLQLLYGRLAPRHV-PRREHHVPREQPAQVAHDGQADALVASS 141
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,161,369
Number of Sequences: 37866
Number of extensions: 985427
Number of successful extensions: 4226
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 4092
Number of HSP's gapped (non-prelim): 160
length of query: 504
length of database: 18,247,518
effective HSP length: 107
effective length of query: 397
effective length of database: 14,195,856
effective search space: 5635754832
effective search space used: 5635754832
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.