Search of human proteins with 189027090

Search of human proteins with 189027090

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|189027090 cytoplasmic polyadenylation element binding
protein 4 [Homo sapiens]
         (729 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|189027090 cytoplasmic polyadenylation element binding protein...  1528   0.0  
gi|50345881 cytoplasmic polyadenylation element binding protein ...   738   0.0  
gi|33188441 cytoplasmic polyadenylation element binding protein ...   711   0.0  
gi|33188439 cytoplasmic polyadenylation element binding protein ...   695   0.0  
gi|119395725 cytoplasmic polyadenylation element binding protein...   214   2e-55
gi|119395722 cytoplasmic polyadenylation element binding protein...   214   2e-55
gi|119395720 cytoplasmic polyadenylation element binding protein...   214   2e-55
gi|119395718 cytoplasmic polyadenylation element binding protein...   208   2e-53
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap...    50   6e-06
gi|61966923 forkhead box B2 [Homo sapiens]                             49   2e-05
gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]          47   5e-05
gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]          47   5e-05
gi|194248068 synaptic Ras GTPase activating protein 1 [Homo sapi...    45   2e-04
gi|14110407 heterogeneous nuclear ribonucleoprotein D-like [Homo...    45   3e-04
gi|32307177 forkhead box G1 [Homo sapiens]                             45   3e-04
gi|55956921 heterogeneous nuclear ribonucleoprotein A/B isoform ...    44   7e-04
gi|55956919 heterogeneous nuclear ribonucleoprotein A/B isoform ...    44   7e-04
gi|212549553 interleukin enhancer binding factor 3 isoform d [Ho...    41   0.003
gi|24234750 interleukin enhancer binding factor 3 isoform a [Hom...    41   0.003
gi|59938776 cAMP responsive element binding protein 5 isoform de...    41   0.005
gi|59938774 cAMP responsive element binding protein 5 isoform be...    41   0.005
gi|59938772 cAMP responsive element binding protein 5 isoform ga...    41   0.005
gi|59938770 cAMP responsive element binding protein 5 isoform al...    41   0.005
gi|157388908 hypothetical protein LOC54954 [Homo sapiens]              41   0.005
gi|148762982 hypothetical protein LOC387640 [Homo sapiens]             40   0.006
gi|151301053 RNA binding motif protein 33 [Homo sapiens]               40   0.008
gi|171543895 ataxin 2 [Homo sapiens]                                   40   0.010
gi|55750053 atrophin-1 [Homo sapiens]                                  40   0.010
gi|55750041 atrophin-1 [Homo sapiens]                                  40   0.010
gi|27894361 nuclear receptor subfamily 4, group A, member 3 isof...    40   0.010

>gi|189027090 cytoplasmic polyadenylation element binding protein 4
           [Homo sapiens]
          Length = 729

 Score = 1528 bits (3955), Expect = 0.0
 Identities = 729/729 (100%), Positives = 729/729 (100%)

Query: 1   MGDYGFGVLVQSNTGNKSAFPVRFHPHLQPPHHHQNATPSPAAFINNNTAANGSSAGSAW 60
           MGDYGFGVLVQSNTGNKSAFPVRFHPHLQPPHHHQNATPSPAAFINNNTAANGSSAGSAW
Sbjct: 1   MGDYGFGVLVQSNTGNKSAFPVRFHPHLQPPHHHQNATPSPAAFINNNTAANGSSAGSAW 60

Query: 61  LFPAPATHNIQDEILGSEKAKSQQQEQQDPLEKQQLSPSPGQEAGILPETEKAKSEENQG 120
           LFPAPATHNIQDEILGSEKAKSQQQEQQDPLEKQQLSPSPGQEAGILPETEKAKSEENQG
Sbjct: 61  LFPAPATHNIQDEILGSEKAKSQQQEQQDPLEKQQLSPSPGQEAGILPETEKAKSEENQG 120

Query: 121 DNSSENGNGKEKIRIESPVLTGFDYQEATGLGTSTQPLTSSASSLTGFSNWSAAIAPSSS 180
           DNSSENGNGKEKIRIESPVLTGFDYQEATGLGTSTQPLTSSASSLTGFSNWSAAIAPSSS
Sbjct: 121 DNSSENGNGKEKIRIESPVLTGFDYQEATGLGTSTQPLTSSASSLTGFSNWSAAIAPSSS 180

Query: 181 TIINEDASFFHQGGVPAASANNGALLFQNFPHHVSPGFGGSFSPQIGPLSQHHPHHPHFQ 240
           TIINEDASFFHQGGVPAASANNGALLFQNFPHHVSPGFGGSFSPQIGPLSQHHPHHPHFQ
Sbjct: 181 TIINEDASFFHQGGVPAASANNGALLFQNFPHHVSPGFGGSFSPQIGPLSQHHPHHPHFQ 240

Query: 241 HHHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPSPWSSYQSPSPTPSSSWS 300
           HHHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPSPWSSYQSPSPTPSSSWS
Sbjct: 241 HHHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPSPWSSYQSPSPTPSSSWS 300

Query: 301 PGGGGYGGWGGSQGRDHRRGLNGGITPLNSISPLKKNFASNHIQLQKYARPSSAFAPKSW 360
           PGGGGYGGWGGSQGRDHRRGLNGGITPLNSISPLKKNFASNHIQLQKYARPSSAFAPKSW
Sbjct: 301 PGGGGYGGWGGSQGRDHRRGLNGGITPLNSISPLKKNFASNHIQLQKYARPSSAFAPKSW 360

Query: 361 MEDSLNRADNIFPFPDRPRTFDMHSLESSLIDIMRAENDTIKGRLNYSYPGSDSSLLINA 420
           MEDSLNRADNIFPFPDRPRTFDMHSLESSLIDIMRAENDTIKGRLNYSYPGSDSSLLINA
Sbjct: 361 MEDSLNRADNIFPFPDRPRTFDMHSLESSLIDIMRAENDTIKGRLNYSYPGSDSSLLINA 420

Query: 421 RTYGRRRGQSSLFPMEDGFLDDGRGDQPLHSGLGSPHCFSHQNGERVERYSRKVFVGGLP 480
           RTYGRRRGQSSLFPMEDGFLDDGRGDQPLHSGLGSPHCFSHQNGERVERYSRKVFVGGLP
Sbjct: 421 RTYGRRRGQSSLFPMEDGFLDDGRGDQPLHSGLGSPHCFSHQNGERVERYSRKVFVGGLP 480

Query: 481 PDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDG 540
           PDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDG
Sbjct: 481 PDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDG 540

Query: 541 KLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIM 600
           KLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIM
Sbjct: 541 KLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIM 600

Query: 601 DRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPY 660
           DRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPY
Sbjct: 601 DRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPY 660

Query: 661 VLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDR 720
           VLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDR
Sbjct: 661 VLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDR 720

Query: 721 PRHISFRWN 729
           PRHISFRWN
Sbjct: 721 PRHISFRWN 729


>gi|50345881 cytoplasmic polyadenylation element binding protein 3
           [Homo sapiens]
          Length = 698

 Score =  738 bits (1906), Expect = 0.0
 Identities = 418/726 (57%), Positives = 489/726 (67%), Gaps = 94/726 (12%)

Query: 70  IQDEILGSEKAKSQQQEQQDPLEKQQLSPSPGQEAGILPET----EKAKSEENQGDNSSE 125
           +QD++L  +K+K+Q Q QQ   ++QQ  P P       P T    E  K EEN    +  
Sbjct: 1   MQDDLL-MDKSKTQPQPQQQ--QRQQQQPQPESSVSEAPSTPLSSETPKPEENSAVPALS 57

Query: 126 NG------NGKEKIRIESPVLTGFDYQEATGLGTSTQ-PLTSSASSLTGF-SNWSAAIAP 177
                   NG +K+++ESP+L G  + +        Q P    AS    F S WS     
Sbjct: 58  PAAAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPAAPGASLSPSFGSTWS----- 112

Query: 178 SSSTIINEDASFFHQGGVPAASANNGALLFQNFPHHVSPGFGGSFSPQIG-PLSQHHPHH 236
           + +T   ED+  F QG  P     NG +LFQNFPHHV+P FGG+FSPQIG   +QHH   
Sbjct: 113 TGTTNAVEDS--FFQGITPV----NGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQQP 166

Query: 237 PH----------FQHHHSQHQQQRRSPASPHPPPFTHRNAA--FNQLPHLANN------- 277
           P            Q   +Q  QQRRSPASP   P+  R+AA  +   P + +        
Sbjct: 167 PPPAPAPQPAQPAQPPQAQPPQQRRSPASPSQAPYAQRSAAAAYGHQPIMTSKPSSSSAV 226

Query: 278 --------LNKPPSPWSSYQSPSPTPSSSWSPGGGGYGGWGGSQ-GRDHRRGLNGGI--- 325
                    +   S W+++QS +   S+  +P       WGG Q GRD RR +  G+   
Sbjct: 227 AAAAAAAAASSASSSWNTHQSVNAAWSAPSNP-------WGGLQAGRDPRRAVGVGVGVG 279

Query: 326 ----TPLNSISPLKKNFASNHIQLQKYARPSSAFAPKSWMEDSLNRADN---IFPFPDRP 378
               +PLN ISPLKK F+SN I   K+ R ++    KSWMED+  R DN   + PF DR 
Sbjct: 280 VGVPSPLNPISPLKKPFSSNVIAPPKFPR-AAPLTSKSWMEDNAFRTDNGNNLLPFQDRS 338

Query: 379 R---TFDMHSLESSLIDIMRAENDTIKGRLNYSYPGSD-----SSLLINARTYGR----- 425
           R   TF++HSLE+SL+D++R +++ +KG+    YP S      + ++      GR     
Sbjct: 339 RPYDTFNLHSLENSLMDMIRTDHEPLKGK---HYPPSGPPMSFADIMWRNHFAGRMGINF 395

Query: 426 -RRGQSSLFPMEDGFLDDGRGDQPLHSGLGSP-HCFSHQNGERVERYSRKVFVGGLPPDI 483
              G  ++  + + FLDD  GDQ L SGL SP  C   QNGERVERYSRKVFVGGLPPDI
Sbjct: 396 HHPGTDNIMALNNAFLDDSHGDQALSSGLSSPTRC---QNGERVERYSRKVFVGGLPPDI 452

Query: 484 DEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDGKLY 543
           DEDEITASFRRFGPL+VDWPHKAESKSYFPPKGYAFLLFQ+ESSVQALIDAC+EEDGKLY
Sbjct: 453 DEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACLEEDGKLY 512

Query: 544 LCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRL 603
           LCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRL
Sbjct: 513 LCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRL 572

Query: 604 YGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLD 663
           YGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQH +IDKRVEVKPYVLD
Sbjct: 573 YGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHNDIDKRVEVKPYVLD 632

Query: 664 DQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRH 723
           DQ+CDECQG RCGGKFAPFFCANVTCLQYYCEYCWA+IHSRAGREFHKPLVKEGGDRPRH
Sbjct: 633 DQMCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWASIHSRAGREFHKPLVKEGGDRPRH 692

Query: 724 ISFRWN 729
           + FRW+
Sbjct: 693 VPFRWS 698


>gi|33188441 cytoplasmic polyadenylation element binding protein 2
           isoform A [Homo sapiens]
          Length = 559

 Score =  711 bits (1835), Expect = 0.0
 Identities = 370/529 (69%), Positives = 407/529 (76%), Gaps = 35/529 (6%)

Query: 217 GFGGSFS----PQIGPLSQHHPHHPHFQHHHSQHQQQRRSPASPHPPPFTHRNAAFNQLP 272
           GFGG FS    P   P + + P          Q  Q RRSP SP         AA     
Sbjct: 50  GFGGPFSATAVPPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQ 109

Query: 273 HLANNLNKP---PSPWSSYQSPSPTPSSSWSPGGGGYGGWGGSQGRDHRRGLNGGIT-PL 328
             + N ++P    SPWS++QS      S W   G G   WG   GRDHRR  N GI   +
Sbjct: 110 RNSYNHHQPLLKQSPWSNHQS------SGW---GTGSMSWGAMHGRDHRRTGNMGIPGTM 160

Query: 329 NSISPLKKNFASNHIQLQKYARPSSAFAPKSWMEDSLNRADN----IFPFPDRPRTFD-- 382
           N ISPLKK F+ N I   K+ R + +  PKSW+ED++ R DN    + P  DR R +D  
Sbjct: 161 NQISPLKKPFSGNVIAPPKFTRSTPSLTPKSWIEDNVFRTDNNSNTLLPLQDRSRMYDSL 220

Query: 383 -MHSLESSLIDIMRAENDTIKGRLNYSYPGSDSSLLINARTYGRRRGQSSLFPMEDGFLD 441
            MHSLE+SLIDIMRAE+D +KGRL+Y +PG+D+ L++N        G+SSLFP++DG LD
Sbjct: 221 NMHSLENSLIDIMRAEHDPLKGRLSYPHPGTDNLLMLN--------GRSSLFPIDDGLLD 272

Query: 442 DGRGDQPLHSGLGSPHCFS-HQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLIV 500
           DG  DQ     L SP C+S HQNGER+ER+SRKVFVGGLPPDIDEDEITASFRRFGPL+V
Sbjct: 273 DGHSDQV--GVLNSPTCYSAHQNGERIERFSRKVFVGGLPPDIDEDEITASFRRFGPLVV 330

Query: 501 DWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRP 560
           DWPHKAESKSYFPPKGYAFLLFQ+ESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRP
Sbjct: 331 DWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRP 390

Query: 561 WNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKY 620
           WNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKY
Sbjct: 391 WNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKY 450

Query: 621 PKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFA 680
           PKGAGRVAFSNQQSYIAAISARFVQLQHG+IDKRVEVKPYVLDDQ+CDECQGARCGGKFA
Sbjct: 451 PKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECQGARCGGKFA 510

Query: 681 PFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN 729
           PFFCANVTCLQYYCE+CWA IHSRAGREFHKPLVKEG DRPR I FRWN
Sbjct: 511 PFFCANVTCLQYYCEFCWANIHSRAGREFHKPLVKEGADRPRQIHFRWN 559


>gi|33188439 cytoplasmic polyadenylation element binding protein 2
           isoform B [Homo sapiens]
          Length = 589

 Score =  695 bits (1794), Expect = 0.0
 Identities = 370/559 (66%), Positives = 407/559 (72%), Gaps = 65/559 (11%)

Query: 217 GFGGSFS----PQIGPLSQHHPHHPHFQHHHSQHQQQRRSPASPHPPPFTHRNAAFNQLP 272
           GFGG FS    P   P + + P          Q  Q RRSP SP         AA     
Sbjct: 50  GFGGPFSATAVPPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQ 109

Query: 273 HLANNLNKP---PSPWSSYQSPSPTPSSSWSPGGGGYGGWGGSQGRDHRRGLNGGIT-PL 328
             + N ++P    SPWS++QS      S W   G G   WG   GRDHRR  N GI   +
Sbjct: 110 RNSYNHHQPLLKQSPWSNHQS------SGW---GTGSMSWGAMHGRDHRRTGNMGIPGTM 160

Query: 329 NSISPLKKNFASNHIQLQKYARPSSAFAPKSWMEDSLNRADN----IFPFP--------- 375
           N ISPLKK F+ N I   K+ R + +  PKSW+ED++ R DN    + P           
Sbjct: 161 NQISPLKKPFSGNVIAPPKFTRSTPSLTPKSWIEDNVFRTDNNSNTLLPLQVRSSLQLPA 220

Query: 376 ---------------------DRPRTFD---MHSLESSLIDIMRAENDTIKGRLNYSYPG 411
                                DR R +D   MHSLE+SLIDIMRAE+D +KGRL+Y +PG
Sbjct: 221 WGSDSLQDSWCTAAGTSRIDQDRSRMYDSLNMHSLENSLIDIMRAEHDPLKGRLSYPHPG 280

Query: 412 SDSSLLINARTYGRRRGQSSLFPMEDGFLDDGRGDQPLHSGLGSPHCFS-HQNGERVERY 470
           +D+ L++N        G+SSLFP++DG LDDG  DQ     L SP C+S HQNGER+ER+
Sbjct: 281 TDNLLMLN--------GRSSLFPIDDGLLDDGHSDQV--GVLNSPTCYSAHQNGERIERF 330

Query: 471 SRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQA 530
           SRKVFVGGLPPDIDEDEITASFRRFGPL+VDWPHKAESKSYFPPKGYAFLLFQ+ESSVQA
Sbjct: 331 SRKVFVGGLPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQA 390

Query: 531 LIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRP 590
           LIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRP
Sbjct: 391 LIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRP 450

Query: 591 LRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGE 650
           LRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHG+
Sbjct: 451 LRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGD 510

Query: 651 IDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFH 710
           IDKRVEVKPYVLDDQ+CDECQGARCGGKFAPFFCANVTCLQYYCE+CWA IHSRAGREFH
Sbjct: 511 IDKRVEVKPYVLDDQMCDECQGARCGGKFAPFFCANVTCLQYYCEFCWANIHSRAGREFH 570

Query: 711 KPLVKEGGDRPRHISFRWN 729
           KPLVKEG DRPR I FRWN
Sbjct: 571 KPLVKEGADRPRQIHFRWN 589


>gi|119395725 cytoplasmic polyadenylation element binding protein 1
           isoform 1 [Homo sapiens]
          Length = 561

 Score =  214 bits (545), Expect = 2e-55
 Identities = 115/257 (44%), Positives = 160/257 (62%), Gaps = 13/257 (5%)

Query: 470 YSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQ 529
           YS KVF+GG+P DI E  +  +FR FG L V+WP K       PPKGY +L+F+ E SV+
Sbjct: 309 YSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVR 368

Query: 530 ALIDAC----IEEDG--KLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIF 583
           +L+ AC    +  DG  + Y  +SS  ++ K VQ+ PW L+DS+FV   SQ LDP +T+F
Sbjct: 369 SLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVF 428

Query: 584 VGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARF 643
           VG +   L A  LA I++ L+GGV YAGIDTD   KYP G+GRV F+NQ+SY+ A+SA F
Sbjct: 429 VGALHGMLNAEALAAILNDLFGGVVYAGIDTDKH-KYPIGSGRVTFNNQRSYLKAVSAAF 487

Query: 644 VQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHS 703
           V+++  +  K+V++ PY L+D LC       C  +  PFFC +  C +Y+C  CW   HS
Sbjct: 488 VEIKTTKFTKKVQIDPY-LEDSLCH-----ICSSQPGPFFCRDQVCFKYFCRSCWHWRHS 541

Query: 704 RAGREFHKPLVKEGGDR 720
             G   H PL++   +R
Sbjct: 542 MEGLRHHSPLMRNQKNR 558


>gi|119395722 cytoplasmic polyadenylation element binding protein 1
           isoform 3 [Homo sapiens]
          Length = 486

 Score =  214 bits (545), Expect = 2e-55
 Identities = 115/257 (44%), Positives = 160/257 (62%), Gaps = 13/257 (5%)

Query: 470 YSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQ 529
           YS KVF+GG+P DI E  +  +FR FG L V+WP K       PPKGY +L+F+ E SV+
Sbjct: 234 YSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVR 293

Query: 530 ALIDAC----IEEDG--KLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIF 583
           +L+ AC    +  DG  + Y  +SS  ++ K VQ+ PW L+DS+FV   SQ LDP +T+F
Sbjct: 294 SLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVF 353

Query: 584 VGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARF 643
           VG +   L A  LA I++ L+GGV YAGIDTD   KYP G+GRV F+NQ+SY+ A+SA F
Sbjct: 354 VGALHGMLNAEALAAILNDLFGGVVYAGIDTDKH-KYPIGSGRVTFNNQRSYLKAVSAAF 412

Query: 644 VQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHS 703
           V+++  +  K+V++ PY L+D LC       C  +  PFFC +  C +Y+C  CW   HS
Sbjct: 413 VEIKTTKFTKKVQIDPY-LEDSLCH-----ICSSQPGPFFCRDQVCFKYFCRSCWHWRHS 466

Query: 704 RAGREFHKPLVKEGGDR 720
             G   H PL++   +R
Sbjct: 467 MEGLRHHSPLMRNQKNR 483


>gi|119395720 cytoplasmic polyadenylation element binding protein 1
           isoform 3 [Homo sapiens]
          Length = 486

 Score =  214 bits (545), Expect = 2e-55
 Identities = 115/257 (44%), Positives = 160/257 (62%), Gaps = 13/257 (5%)

Query: 470 YSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQ 529
           YS KVF+GG+P DI E  +  +FR FG L V+WP K       PPKGY +L+F+ E SV+
Sbjct: 234 YSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGYVYLVFELEKSVR 293

Query: 530 ALIDAC----IEEDG--KLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIF 583
           +L+ AC    +  DG  + Y  +SS  ++ K VQ+ PW L+DS+FV   SQ LDP +T+F
Sbjct: 294 SLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSRTVF 353

Query: 584 VGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARF 643
           VG +   L A  LA I++ L+GGV YAGIDTD   KYP G+GRV F+NQ+SY+ A+SA F
Sbjct: 354 VGALHGMLNAEALAAILNDLFGGVVYAGIDTDKH-KYPIGSGRVTFNNQRSYLKAVSAAF 412

Query: 644 VQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHS 703
           V+++  +  K+V++ PY L+D LC       C  +  PFFC +  C +Y+C  CW   HS
Sbjct: 413 VEIKTTKFTKKVQIDPY-LEDSLCH-----ICSSQPGPFFCRDQVCFKYFCRSCWHWRHS 466

Query: 704 RAGREFHKPLVKEGGDR 720
             G   H PL++   +R
Sbjct: 467 MEGLRHHSPLMRNQKNR 483


>gi|119395718 cytoplasmic polyadenylation element binding protein 1
           isoform 2 [Homo sapiens]
          Length = 491

 Score =  208 bits (529), Expect = 2e-53
 Identities = 115/262 (43%), Positives = 160/262 (61%), Gaps = 18/262 (6%)

Query: 470 YSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKG-----YAFLLFQD 524
           YS KVF+GG+P DI E  +  +FR FG L V+WP K       PPKG     Y +L+F+ 
Sbjct: 234 YSCKVFLGGVPWDITEAGLVNTFRVFGSLSVEWPGKDGKHPRCPPKGNMPKGYVYLVFEL 293

Query: 525 ESSVQALIDAC----IEEDG--KLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDP 578
           E SV++L+ AC    +  DG  + Y  +SS  ++ K VQ+ PW L+DS+FV   SQ LDP
Sbjct: 294 EKSVRSLLQACSHDPLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDP 353

Query: 579 RKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAA 638
            +T+FVG +   L A  LA I++ L+GGV YAGIDTD   KYP G+GRV F+NQ+SY+ A
Sbjct: 354 SRTVFVGALHGMLNAEALAAILNDLFGGVVYAGIDTDKH-KYPIGSGRVTFNNQRSYLKA 412

Query: 639 ISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCW 698
           +SA FV+++  +  K+V++ PY L+D LC       C  +  PFFC +  C +Y+C  CW
Sbjct: 413 VSAAFVEIKTTKFTKKVQIDPY-LEDSLCH-----ICSSQPGPFFCRDQVCFKYFCRSCW 466

Query: 699 AAIHSRAGREFHKPLVKEGGDR 720
              HS  G   H PL++   +R
Sbjct: 467 HWRHSMEGLRHHSPLMRNQKNR 488


>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
          Length = 2161

 Score = 50.4 bits (119), Expect = 6e-06
 Identities = 34/90 (37%), Positives = 38/90 (42%), Gaps = 3/90 (3%)

Query: 227  GPLSQHHPHHPHFQHHHSQHQQQRRSPA-SPHPPPFTHRNAAFNQLPHLANNLNKPPSPW 285
            GPL   H H PH  HHH+   Q     A  PHPP      +  +  P LA         W
Sbjct: 991  GPLPPAHHHPPHHHHHHAPPPQPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGW 1050

Query: 286  SSYQSPSPTPSS-SWSPGGGGYGGWGGSQG 314
                 PSPTP + S S  G   GG G SQG
Sbjct: 1051 RG-GGPSPTPGAPSPSHHGSAGGGGGSSQG 1079



 Score = 33.9 bits (76), Expect = 0.55
 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 7/63 (11%)

Query: 252  SPASPHPPPFTHRNAAFNQLPHLANNLNKPPSPWSSYQSPSPTPSSSWSP------GGGG 305
            SPASP PPP     +  N +P +   + K PS  SS +S   + + +  P      GGGG
Sbjct: 1134 SPASPQPPPAVAAPSEKNSIP-IPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEPTGGGG 1192

Query: 306  YGG 308
             GG
Sbjct: 1193 GGG 1195



 Score = 31.2 bits (69), Expect = 3.6
 Identities = 22/63 (34%), Positives = 26/63 (41%)

Query: 284 PWSSYQSPSPTPSSSWSPGGGGYGGWGGSQGRDHRRGLNGGITPLNSISPLKKNFASNHI 343
           P  + + P   PSSS +P  G  GG GGS G     G  G    L S  P +   A    
Sbjct: 506 PEDAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGSLGSRGRRRKLYSAVPGRSFMAVKSY 565

Query: 344 QLQ 346
           Q Q
Sbjct: 566 QAQ 568


>gi|61966923 forkhead box B2 [Homo sapiens]
          Length = 432

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 28/77 (36%), Positives = 29/77 (37%), Gaps = 9/77 (11%)

Query: 227 GPLSQHHPHHPHFQHH-----HSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKP 281
           G L  HH HHPH  HH     H  H      P  P PPP  H    F+Q P  A      
Sbjct: 134 GHLHPHHHHHPHHHHHHHAAAHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTA----PQ 189

Query: 282 PSPWSSYQSPSPTPSSS 298
           P P    Q P   P  S
Sbjct: 190 PPPHLPSQPPQQPPQQS 206


>gi|25470890 DAZ associated protein 1 isoform a [Homo sapiens]
          Length = 378

 Score = 47.4 bits (111), Expect = 5e-05
 Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 16/189 (8%)

Query: 473 KVFVGGLPPDIDEDEITASFRRFGPLI--VDWPHKAESKSYFPPKGYAFLLFQDESSVQA 530
           K+FVGGL     ++ + + F ++G ++  V    K  ++S    +G+ F+ F+D + V  
Sbjct: 11  KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQS----RGFGFVKFKDPNCVGT 66

Query: 531 LIDACIEE-DGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPR 589
           ++ +     DG+            +P + RP          D S+       IFVGG+P 
Sbjct: 67  VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKS----NKIFVGGIPH 122

Query: 590 PLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHG 649
                EL     + +G V    +  D E + P+G G + F ++QS   A++  F    H 
Sbjct: 123 NCGETELREYFKK-FGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHF----HD 177

Query: 650 EIDKRVEVK 658
            + K+VEVK
Sbjct: 178 IMGKKVEVK 186



 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 5/74 (6%)

Query: 462 QNGERVERY-SRKVFVGGLPPDIDEDEITASFRRFGPLI-VDWPHKAESKSYFPPKGYAF 519
           Q G R +   S K+FVGG+P +  E E+   F++FG +  V   + AE +    P+G+ F
Sbjct: 102 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR---PRGFGF 158

Query: 520 LLFQDESSVQALID 533
           + F+DE SV   ++
Sbjct: 159 ITFEDEQSVDQAVN 172


>gi|25470886 DAZ associated protein 1 isoform b [Homo sapiens]
          Length = 407

 Score = 47.4 bits (111), Expect = 5e-05
 Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 16/189 (8%)

Query: 473 KVFVGGLPPDIDEDEITASFRRFGPLI--VDWPHKAESKSYFPPKGYAFLLFQDESSVQA 530
           K+FVGGL     ++ + + F ++G ++  V    K  ++S    +G+ F+ F+D + V  
Sbjct: 11  KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQS----RGFGFVKFKDPNCVGT 66

Query: 531 LIDACIEE-DGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPR 589
           ++ +     DG+            +P + RP          D S+       IFVGG+P 
Sbjct: 67  VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKS----NKIFVGGIPH 122

Query: 590 PLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHG 649
                EL     + +G V    +  D E + P+G G + F ++QS   A++  F    H 
Sbjct: 123 NCGETELREYFKK-FGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHF----HD 177

Query: 650 EIDKRVEVK 658
            + K+VEVK
Sbjct: 178 IMGKKVEVK 186



 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 5/74 (6%)

Query: 462 QNGERVERY-SRKVFVGGLPPDIDEDEITASFRRFGPLI-VDWPHKAESKSYFPPKGYAF 519
           Q G R +   S K+FVGG+P +  E E+   F++FG +  V   + AE +    P+G+ F
Sbjct: 102 QKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQR---PRGFGF 158

Query: 520 LLFQDESSVQALID 533
           + F+DE SV   ++
Sbjct: 159 ITFEDEQSVDQAVN 172


>gi|194248068 synaptic Ras GTPase activating protein 1 [Homo sapiens]
          Length = 1343

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 57/211 (27%), Positives = 79/211 (37%), Gaps = 43/211 (20%)

Query: 194  GVPAASANNGALLFQNFPHHVSP-------GFGGSFSPQIGPLSQHHPHHPHFQHH---- 242
            GVPA       L FQN   H++        G GG      GP S HH HH H  H     
Sbjct: 915  GVPAQQLRI-PLSFQNPLFHMAADGPGPPGGHGGGGGH--GPPSSHHHHHHHHHHRGGEP 971

Query: 243  --------HSQHQQQRRSPASPHPPPFT--HRNAAFNQLP-----------HLANNLNKP 281
                    H   + +  S   P PP  +  H ++  ++              L +NL   
Sbjct: 972  PGDTFAPFHGYSKSEDLSSGVPKPPAASILHSHSYSDEFGPSGTDFTRRQLSLQDNLQHM 1031

Query: 282  PSPWSSYQSPS-PTPSSSWSPGGGGYGGWGGSQGRDHRRGLNGGITPLNSISPLKKNFAS 340
             SP      P  P PS      GGG GG GG Q    +RG +  +T    +S  +K   S
Sbjct: 1032 LSPPQITIGPQRPAPSGPGGGSGGGSGGGGGGQPPPLQRGKSQQLT----VSAAQKPRPS 1087

Query: 341  NHIQLQKYARPSSAFAPKSWMEDSLNRADNI 371
            +   LQ    P  ++ P    + SL++  +I
Sbjct: 1088 SGNLLQS---PEPSYGPARPRQQSLSKEGSI 1115


>gi|14110407 heterogeneous nuclear ribonucleoprotein D-like [Homo
           sapiens]
          Length = 420

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 48/219 (21%), Positives = 95/219 (43%), Gaps = 28/219 (12%)

Query: 463 NGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLF 522
           N  + ++   K+F+GGL  D  + ++T    RFG  +VD   K +  +    +G+ F+LF
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGE-VVDCTIKTDPVT-GRSRGFGFVLF 196

Query: 523 QDESSVQALIDACIEE-DGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKT 581
           +D +SV  +++    + DGKL     +  +K K                      +P K 
Sbjct: 197 KDAASVDKVLELKEHKLDGKLIDPKRAKALKGK----------------------EPPKK 234

Query: 582 IFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISA 641
           +FVGG+  P  + E        +G +    +  D +    +G   + +++++     + +
Sbjct: 235 VFVGGL-SPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLES 293

Query: 642 RFVQLQHGEIDKRVEVKPYVLDDQLCDE--CQGARCGGK 678
           R+ Q+  G+ + +V     V   Q   +   +GA  GG+
Sbjct: 294 RYHQIGSGKCEIKVAQPKEVYRQQQQQQKGGRGAAAGGR 332



 Score = 31.6 bits (70), Expect = 2.7
 Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 17/100 (17%)

Query: 582 IFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISA 641
           +F+GG+       +L   + R +G V    I TDP     +G G V F +  S       
Sbjct: 150 MFIGGLSWDTSKKDLTEYLSR-FGEVVDCTIKTDPVTGRSRGFGFVLFKDAAS------- 201

Query: 642 RFVQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAP 681
                    +DK +E+K + LD +L D  +     GK  P
Sbjct: 202 ---------VDKVLELKEHKLDGKLIDPKRAKALKGKEPP 232


>gi|32307177 forkhead box G1 [Homo sapiens]
          Length = 489

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 40/136 (29%), Positives = 48/136 (35%), Gaps = 29/136 (21%)

Query: 195 VPAASANNGALL---FQNFPHHVSPGFGGSFSPQIGPLSQHHPHHPHFQHHHSQH----- 246
           +P +S +  +L+    QN  HH S G   S          HHP H H  HHH  H     
Sbjct: 13  IPKSSFSINSLVPEAVQNDNHHASHGHHNS----------HHPQHHHHHHHHHHHPPPPA 62

Query: 247 --------QQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPSPWSSYQSPSPTPSSS 298
                   QQQ   P  P P P   R A           L  PP P      P+     +
Sbjct: 63  PQPPPPPQQQQPPPPPPPAPQPPQTRGAPAADDDKGPQQLLLPPPP---PPPPAAALDGA 119

Query: 299 WSPGGGGYGGWGGSQG 314
            + G GG G  GG  G
Sbjct: 120 KADGLGGKGEPGGGPG 135


>gi|55956921 heterogeneous nuclear ribonucleoprotein A/B isoform b
           [Homo sapiens]
          Length = 285

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 25/203 (12%)

Query: 463 NGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLF 522
           N  + E  + K+FVGGL  D  + ++   F +FG  +VD   K +  +    +G+ F+LF
Sbjct: 61  NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGE-VVDCTIKMDPNT-GRSRGFGFILF 118

Query: 523 QDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTI 582
           +D +SV+ ++D   +++ +L   V  P    K + ++                 DP K I
Sbjct: 119 KDAASVEKVLD---QKEHRLDGRVIDP---KKAMAMKK----------------DPVKKI 156

Query: 583 FVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISAR 642
           FVGG+  P    E        +G +    +  DP+L   +G   + F  ++     +  +
Sbjct: 157 FVGGL-NPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKK 215

Query: 643 FVQLQHGEIDKRVEVKPYVLDDQ 665
           F  +   + + +V     V   Q
Sbjct: 216 FHTVSGSKCEIKVAQPKEVYQQQ 238


>gi|55956919 heterogeneous nuclear ribonucleoprotein A/B isoform a
           [Homo sapiens]
          Length = 332

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 25/203 (12%)

Query: 463 NGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLF 522
           N  + E  + K+FVGGL  D  + ++   F +FG  +VD   K +  +    +G+ F+LF
Sbjct: 61  NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGE-VVDCTIKMDPNT-GRSRGFGFILF 118

Query: 523 QDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTI 582
           +D +SV+ ++D   +++ +L   V  P    K + ++                 DP K I
Sbjct: 119 KDAASVEKVLD---QKEHRLDGRVIDP---KKAMAMKK----------------DPVKKI 156

Query: 583 FVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISAR 642
           FVGG+  P    E        +G +    +  DP+L   +G   + F  ++     +  +
Sbjct: 157 FVGGL-NPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKK 215

Query: 643 FVQLQHGEIDKRVEVKPYVLDDQ 665
           F  +   + + +V     V   Q
Sbjct: 216 FHTVSGSKCEIKVAQPKEVYQQQ 238


>gi|212549553 interleukin enhancer binding factor 3 isoform d [Homo
           sapiens]
          Length = 898

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 41/176 (23%), Positives = 63/176 (35%), Gaps = 19/176 (10%)

Query: 193 GGVPAASANNGALLFQNFPHHVSPGFGGSFSPQIGPLSQHHPHHPHFQHHHSQHQQQRRS 252
           GG   +S         N+   V P   G   P  G   Q   +   +Q H  Q Q   +S
Sbjct: 709 GGGGGSSGYGSYYQGDNYNSPVPPKHAGKKQPHGG--QQKPSYGSGYQSHQGQQQSYNQS 766

Query: 253 PASPHPPP------FTHRNAAFNQLPHLANNLNKPPSPWSS---YQSPSPTPSSSWSPGG 303
           P S + PP      + H   +++     +N+ N P     S   Y+S      S    GG
Sbjct: 767 PYSNYGPPQGKQKGYNHGQGSYS----YSNSYNSPGGGGGSDYNYESKFNYSGSGGRSGG 822

Query: 304 GGYGGWGGSQGRDHRRGLNGGITPLNSISPLKKNFASNHIQL----QKYARPSSAF 355
             YG  G S       G  GG    +S    +  ++ ++       Q Y+ P S++
Sbjct: 823 NSYGSGGASYNPGSHGGYGGGSGGGSSYQGKQGGYSQSNYNSPGSGQNYSGPPSSY 878


>gi|24234750 interleukin enhancer binding factor 3 isoform a [Homo
           sapiens]
          Length = 894

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 41/176 (23%), Positives = 63/176 (35%), Gaps = 19/176 (10%)

Query: 193 GGVPAASANNGALLFQNFPHHVSPGFGGSFSPQIGPLSQHHPHHPHFQHHHSQHQQQRRS 252
           GG   +S         N+   V P   G   P  G   Q   +   +Q H  Q Q   +S
Sbjct: 705 GGGGGSSGYGSYYQGDNYNSPVPPKHAGKKQPHGG--QQKPSYGSGYQSHQGQQQSYNQS 762

Query: 253 PASPHPPP------FTHRNAAFNQLPHLANNLNKPPSPWSS---YQSPSPTPSSSWSPGG 303
           P S + PP      + H   +++     +N+ N P     S   Y+S      S    GG
Sbjct: 763 PYSNYGPPQGKQKGYNHGQGSYS----YSNSYNSPGGGGGSDYNYESKFNYSGSGGRSGG 818

Query: 304 GGYGGWGGSQGRDHRRGLNGGITPLNSISPLKKNFASNHIQL----QKYARPSSAF 355
             YG  G S       G  GG    +S    +  ++ ++       Q Y+ P S++
Sbjct: 819 NSYGSGGASYNPGSHGGYGGGSGGGSSYQGKQGGYSQSNYNSPGSGQNYSGPPSSY 874


>gi|59938776 cAMP responsive element binding protein 5 isoform delta
           [Homo sapiens]
          Length = 369

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 6/69 (8%)

Query: 231 QHHPHHPHFQHHHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPS-----PW 285
           QH  HHPH Q HH Q+     S +  H  P  H+ +    L H  N     P+     P 
Sbjct: 156 QHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPL-HTGNQAQVSPATQQMQPT 214

Query: 286 SSYQSPSPT 294
            + Q P PT
Sbjct: 215 QTIQPPQPT 223



 Score = 30.4 bits (67), Expect = 6.1
 Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 12/68 (17%)

Query: 232 HHPH-HPHFQH-----HHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPSPW 285
           HH H HPH QH     HH    Q +     PHP P   +N      PH  ++ +    P 
Sbjct: 133 HHMHSHPH-QHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNH-----PHHHSHSHLHAHPA 186

Query: 286 SSYQSPSP 293
               SP P
Sbjct: 187 HHQTSPHP 194


>gi|59938774 cAMP responsive element binding protein 5 isoform beta
           [Homo sapiens]
          Length = 501

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 6/69 (8%)

Query: 231 QHHPHHPHFQHHHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPS-----PW 285
           QH  HHPH Q HH Q+     S +  H  P  H+ +    L H  N     P+     P 
Sbjct: 288 QHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPL-HTGNQAQVSPATQQMQPT 346

Query: 286 SSYQSPSPT 294
            + Q P PT
Sbjct: 347 QTIQPPQPT 355



 Score = 30.4 bits (67), Expect = 6.1
 Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 12/68 (17%)

Query: 232 HHPH-HPHFQH-----HHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPSPW 285
           HH H HPH QH     HH    Q +     PHP P   +N      PH  ++ +    P 
Sbjct: 265 HHMHSHPH-QHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNH-----PHHHSHSHLHAHPA 318

Query: 286 SSYQSPSP 293
               SP P
Sbjct: 319 HHQTSPHP 326


>gi|59938772 cAMP responsive element binding protein 5 isoform gamma
           [Homo sapiens]
          Length = 475

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 6/69 (8%)

Query: 231 QHHPHHPHFQHHHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPS-----PW 285
           QH  HHPH Q HH Q+     S +  H  P  H+ +    L H  N     P+     P 
Sbjct: 262 QHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPL-HTGNQAQVSPATQQMQPT 320

Query: 286 SSYQSPSPT 294
            + Q P PT
Sbjct: 321 QTIQPPQPT 329



 Score = 30.4 bits (67), Expect = 6.1
 Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 12/68 (17%)

Query: 232 HHPH-HPHFQH-----HHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPSPW 285
           HH H HPH QH     HH    Q +     PHP P   +N      PH  ++ +    P 
Sbjct: 239 HHMHSHPH-QHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNH-----PHHHSHSHLHAHPA 292

Query: 286 SSYQSPSP 293
               SP P
Sbjct: 293 HHQTSPHP 300


>gi|59938770 cAMP responsive element binding protein 5 isoform alpha
           [Homo sapiens]
          Length = 508

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 6/69 (8%)

Query: 231 QHHPHHPHFQHHHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPS-----PW 285
           QH  HHPH Q HH Q+     S +  H  P  H+ +    L H  N     P+     P 
Sbjct: 295 QHPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPL-HTGNQAQVSPATQQMQPT 353

Query: 286 SSYQSPSPT 294
            + Q P PT
Sbjct: 354 QTIQPPQPT 362



 Score = 30.4 bits (67), Expect = 6.1
 Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 12/68 (17%)

Query: 232 HHPH-HPHFQH-----HHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPSPW 285
           HH H HPH QH     HH    Q +     PHP P   +N      PH  ++ +    P 
Sbjct: 272 HHMHSHPH-QHQTLPPHHPYPHQHQHPAHHPHPQPHHQQNH-----PHHHSHSHLHAHPA 325

Query: 286 SSYQSPSP 293
               SP P
Sbjct: 326 HHQTSPHP 333


>gi|157388908 hypothetical protein LOC54954 [Homo sapiens]
          Length = 1096

 Score = 40.8 bits (94), Expect = 0.005
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 216 PGFGGSFSPQIGPLSQHHPHHPHFQHHHSQHQQQRRSPASPHPPP 260
           P   G++S   GP+  HHP   H  HHH Q Q     P  P PPP
Sbjct: 69  PAALGAYSGGAGPIRHHHP--AHHFHHHGQAQPGLHPPLPPPPPP 111


>gi|148762982 hypothetical protein LOC387640 [Homo sapiens]
          Length = 908

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 18/80 (22%)

Query: 197 AASANNGALLFQNFPHHVSPGFGGSFSPQIGPLSQHHPHHPHFQHHHSQHQQQRRSPASP 256
           AA+A  GA   + F  H+  GF         P   HH HH    HHH  H  + + P   
Sbjct: 313 AAAAAAGATCLERF--HLVNGFC--------PPPHHHHHH---HHHHHHHHHRAQPPQQS 359

Query: 257 HPPPFTHRNAAFNQLPHLAN 276
           H PP  HR       PHL +
Sbjct: 360 HHPPHHHR-----PQPHLGS 374



 Score = 31.6 bits (70), Expect = 2.7
 Identities = 22/118 (18%), Positives = 49/118 (41%), Gaps = 26/118 (22%)

Query: 30  PPHHH----------QNATPSPAAFINNNTAANGSSAGSAWLFPAPATHNIQDEILGSEK 79
           PPHHH          ++ +    +   ++ AAN S  GS+              +  S  
Sbjct: 362 PPHHHRPQPHLGSFPESCSSDSESSSYSDHAANDSDFGSS--------------LSSSSN 407

Query: 80  AKSQQQEQQDPLEKQQLSPSPGQEAGILPETEKAKSEENQGDNSSENGNGKEKIRIES 137
           + S ++E+++  E+++     G       ++ +  SEE      S++ +G  ++ ++S
Sbjct: 408 SVSSEEEEEEGEEEEEEEEEEGGSGA--SDSSEVSSEEEDSSTESDSSSGSSQVSVQS 463


>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
          Length = 1170

 Score = 40.0 bits (92), Expect = 0.008
 Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 4/89 (4%)

Query: 211 PHHVSPGFGGSFSPQIGPLSQHHPHHPHFQ---HHHSQHQQQRRSPASPHPPP-FTHRNA 266
           P H  P   G   P + P  Q  P  P  Q    H   HQ   + P    PPP    ++ 
Sbjct: 571 PTHTQPNLQGPLHPPLPPPHQPQPQQPQQQPPPQHQPPHQPPHQPPPQHQPPPQHPPQHP 630

Query: 267 AFNQLPHLANNLNKPPSPWSSYQSPSPTP 295
             +Q  H  ++L+ PP P      P   P
Sbjct: 631 PQHQHHHHHHHLSVPPPPLMPMSQPQFRP 659


>gi|171543895 ataxin 2 [Homo sapiens]
          Length = 1313

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 56/225 (24%), Positives = 76/225 (33%), Gaps = 31/225 (13%)

Query: 98  PSPGQEAGILPETEKAKSEENQGDNSSENGNGKEKIRIESPVLTGFDYQEATGLGTSTQP 157
           P PG      P   +  S  +  D    NGNG    R  S        +   GLG   +P
Sbjct: 58  PGPG------PPPSRQSSPPSASDCFGSNGNGGGAFRPGS--------RRLLGLGGPPRP 103

Query: 158 LTSSASSLTGFSNWSAAIAPSSSTIINEDASFFHQGGVPAASANNGALLFQNFPHHVSPG 217
                  L   S  +   AP+ ++ +          G  A+   +G  L +  P    P 
Sbjct: 104 FVVLLLPLA--SPGAPPAAPTRASPL----------GARASPPRSGVSLARPAPGCPRP- 150

Query: 218 FGGSFSPQIGPLSQH-HPHHPHFQHHHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLAN 276
              +  P  GPL+    P     Q    Q QQQ++      PPP             LA+
Sbjct: 151 ---ACEPVYGPLTMSLKPQQQQQQQQQQQQQQQQQQQQQQQPPPAAANVRKPGGSGLLAS 207

Query: 277 NLNKPPSPWSSYQSPSPTPSSSWSPGGGGYGGWGGSQGRDHRRGL 321
               P    SS  S S T  SS      G G  G  +GR+  +GL
Sbjct: 208 PAAAPSPSSSSVSSSSATAPSSVVAATSGGGRPGLGRGRNSNKGL 252



 Score = 34.3 bits (77), Expect = 0.42
 Identities = 72/307 (23%), Positives = 103/307 (33%), Gaps = 54/307 (17%)

Query: 18   SAFPVRFHPHLQPPHH---HQNATP---SPAAFINNNTAANGSSAGSAWLFPAPATHNIQ 71
            S  P    P  QP      HQ  TP    P  F  N       S G   L+P P T    
Sbjct: 932  STTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPV 991

Query: 72   DEILGSEKAKSQQQEQQDPLEKQQLSPSPGQEAGI-LPETEKAKSEENQGDNSSENGNG- 129
            ++        +  Q++QD    Q     P   AG  +  T  A S +    +  +  N  
Sbjct: 992  NQAKTYRAVPNMPQQRQDQ-HHQSAMMHPASAAGPPIAATPPAYSTQYVAYSPQQFPNQP 1050

Query: 130  ---------KEKIRIESPVLTGFDYQEATGLGTSTQP-LTSSASSLTGFSNWSAAIAPSS 179
                      +   + SPV+ G     A    T  QP L SS+++  G    + A+    
Sbjct: 1051 LVQHVPHYQSQHPHVYSPVIQGNARMMAPP--THAQPGLVSSSATQYGAHEQTHAMYACP 1108

Query: 180  STIINEDASFFHQGGVPAASANNGALLFQNFPHHVSPGFGGSFSPQIGPLSQHHPHHPHF 239
                N++ S      +   S      L Q + H               P +  HPH PH 
Sbjct: 1109 KLPYNKETSPSFYFAISTGS------LAQQYAH---------------PNATLHPHTPHP 1147

Query: 240  QHHHSQ--HQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPSPWSSYQS------P 291
            Q   +    QQ +   + P P P  H      Q  HLA+    P    + Y +      P
Sbjct: 1148 QPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLAS----PQQQSAIYHAGLAPTPP 1203

Query: 292  SPTPSSS 298
            S TP+S+
Sbjct: 1204 SMTPASN 1210


>gi|55750053 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 80/346 (23%), Positives = 109/346 (31%), Gaps = 72/346 (20%)

Query: 18  SAFPVRFHPHLQPPHHHQNATPSPAAFINNNTAANGSSAGSAWLFPA--PATHNIQDEI- 74
           SA P    PH+ P     N  P PA    NN +A+    G+  L P   P+ H +   + 
Sbjct: 287 SAPPPANFPHVTP-----NLPPPPALRPLNNASASPPGLGAQPL-PGHLPSPHAMGQGMG 340

Query: 75  ---LGSEKAKSQQQEQQDPLEKQQLSPSPGQEAGILPETEKAKSEENQGDNSSENGNGKE 131
               G EK  +              +P+P       P +  + S      +SS + +   
Sbjct: 341 GLPPGPEKGPTLAPSPHSLPPASSSAPAPPMR---FPYSSSSSSSAAASSSSSSSSSSAS 397

Query: 132 KIRIESPVLTGF--DYQEATGLGTSTQPLTSSASSLTGFSNWSAAIAPSSSTIINEDASF 189
                S  L  +   +   T L  S QP   +  SL   + WS                 
Sbjct: 398 PFPA-SQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWS----------------- 439

Query: 190 FHQGGVPAASANNGALLFQNFPHHVSPGFGGSFSPQIGPLSQHHPHHPHFQHHHSQHQQQ 249
             QG  P      G LL  +  H       G F P  G  S  HP      HHH Q QQQ
Sbjct: 440 --QG--PPPPPPYGRLLANSNAHP------GPFPPSTGAQSTAHPPVSTHHHHHQQQQQQ 489

Query: 250 RRSP--------------------ASPHP--PPFTHRNAAFNQLPHLANNLNKPPSPWSS 287
           ++                      A PHP     +H    +   P L +    PP P   
Sbjct: 490 QQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGP--- 546

Query: 288 YQSPSPTPSSSWSPGGGGYGGWGGSQGRDHRRGLNGGITPLNSISP 333
             +  P P S  S    G  G   S   +     + G  P +  SP
Sbjct: 547 --AHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSP 590


>gi|55750041 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 80/346 (23%), Positives = 109/346 (31%), Gaps = 72/346 (20%)

Query: 18  SAFPVRFHPHLQPPHHHQNATPSPAAFINNNTAANGSSAGSAWLFPA--PATHNIQDEI- 74
           SA P    PH+ P     N  P PA    NN +A+    G+  L P   P+ H +   + 
Sbjct: 287 SAPPPANFPHVTP-----NLPPPPALRPLNNASASPPGLGAQPL-PGHLPSPHAMGQGMG 340

Query: 75  ---LGSEKAKSQQQEQQDPLEKQQLSPSPGQEAGILPETEKAKSEENQGDNSSENGNGKE 131
               G EK  +              +P+P       P +  + S      +SS + +   
Sbjct: 341 GLPPGPEKGPTLAPSPHSLPPASSSAPAPPMR---FPYSSSSSSSAAASSSSSSSSSSAS 397

Query: 132 KIRIESPVLTGF--DYQEATGLGTSTQPLTSSASSLTGFSNWSAAIAPSSSTIINEDASF 189
                S  L  +   +   T L  S QP   +  SL   + WS                 
Sbjct: 398 PFPA-SQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAVWS----------------- 439

Query: 190 FHQGGVPAASANNGALLFQNFPHHVSPGFGGSFSPQIGPLSQHHPHHPHFQHHHSQHQQQ 249
             QG  P      G LL  +  H       G F P  G  S  HP      HHH Q QQQ
Sbjct: 440 --QG--PPPPPPYGRLLANSNAHP------GPFPPSTGAQSTAHPPVSTHHHHHQQQQQQ 489

Query: 250 RRSP--------------------ASPHP--PPFTHRNAAFNQLPHLANNLNKPPSPWSS 287
           ++                      A PHP     +H    +   P L +    PP P   
Sbjct: 490 QQQQQQQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGP--- 546

Query: 288 YQSPSPTPSSSWSPGGGGYGGWGGSQGRDHRRGLNGGITPLNSISP 333
             +  P P S  S    G  G   S   +     + G  P +  SP
Sbjct: 547 --AHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSP 590


>gi|27894361 nuclear receptor subfamily 4, group A, member 3 isoform
           b [Homo sapiens]
          Length = 637

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 14/30 (46%), Positives = 17/30 (56%)

Query: 227 GPLSQHHPHHPHFQHHHSQHQQQRRSPASP 256
           G    +H HH H  HHH  HQQQ + P+ P
Sbjct: 100 GRAPSYHHHHHHHHHHHHHHQQQHQQPSIP 129



 Score = 38.5 bits (88), Expect = 0.022
 Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 232 HHPHHPHFQHHHSQHQQQRRSPA-SPHPPPFTHRNAAFNQLPHLANNLNK-PPSPWSSYQ 289
           HH HH H  HH  QHQQ    PA SP        +  F Q P         PP   + + 
Sbjct: 109 HHHHHHHHHHHQQQHQQPSIPPASSPEDEVLPSTSMYFKQSPPSTPTTPAFPPQAGALWD 168

Query: 290 SPSPTPSSSWSPG 302
              P+     +PG
Sbjct: 169 EALPSAPGCIAPG 181


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.134    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,472,494
Number of Sequences: 37866
Number of extensions: 1928152
Number of successful extensions: 13789
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 337
Number of HSP's that attempted gapping in prelim test: 11370
Number of HSP's gapped (non-prelim): 1886
length of query: 729
length of database: 18,247,518
effective HSP length: 110
effective length of query: 619
effective length of database: 14,082,258
effective search space: 8716917702
effective search space used: 8716917702
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.