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Search of human proteins with 187829052
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|187829052 tumor protein p73 isoform d [Homo sapiens]
(426 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|187829052 tumor protein p73 isoform d [Homo sapiens] 877 0.0
gi|187829017 tumor protein p73 isoform c [Homo sapiens] 716 0.0
gi|187828902 tumor protein p73 isoform b [Homo sapiens] 716 0.0
gi|4885645 tumor protein p73 isoform a [Homo sapiens] 689 0.0
gi|169234665 tumor protein p63 isoform 6 [Homo sapiens] 481 e-136
gi|169234663 tumor protein p63 isoform 5 [Homo sapiens] 481 e-136
gi|169234661 tumor protein p63 isoform 4 [Homo sapiens] 481 e-136
gi|169234659 tumor protein p63 isoform 3 [Homo sapiens] 481 e-136
gi|169234657 tumor protein p63 isoform 2 [Homo sapiens] 481 e-136
gi|31543818 tumor protein p63 isoform 1 [Homo sapiens] 481 e-136
gi|187830777 tumor protein p53 isoform a [Homo sapiens] 276 3e-74
gi|120407068 tumor protein p53 isoform a [Homo sapiens] 276 3e-74
gi|187830855 tumor protein p53 isoform b [Homo sapiens] 254 1e-67
gi|187830823 tumor protein p53 isoform c [Homo sapiens] 254 1e-67
gi|187830894 tumor protein p53 isoform d [Homo sapiens] 236 4e-62
gi|187830909 tumor protein p53 isoform f [Homo sapiens] 214 1e-55
gi|187830901 tumor protein p53 isoform e [Homo sapiens] 214 1e-55
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 44 2e-04
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 44 2e-04
gi|9945318 MAX binding protein [Homo sapiens] 39 0.007
gi|157743257 POU domain, class 6, transcription factor 2 [Homo s... 38 0.015
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 35 0.17
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] 35 0.17
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 35 0.17
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo... 35 0.17
gi|161019170 mucin 5AC [Homo sapiens] 34 0.29
gi|31652242 transcription factor 20 isoform 2 [Homo sapiens] 34 0.29
gi|31652244 transcription factor 20 isoform 1 [Homo sapiens] 34 0.29
gi|110347429 mediator complex subunit 12 [Homo sapiens] 33 0.38
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 33 0.38
>gi|187829052 tumor protein p73 isoform d [Homo sapiens]
Length = 426
Score = 877 bits (2265), Expect = 0.0
Identities = 426/426 (100%), Positives = 426/426 (100%)
Query: 1 MLYVGDPARHLATAQFNLLSSTMDQMSSRAASASPYTPEHAASVPTHSPYAQPSSTFDTM 60
MLYVGDPARHLATAQFNLLSSTMDQMSSRAASASPYTPEHAASVPTHSPYAQPSSTFDTM
Sbjct: 1 MLYVGDPARHLATAQFNLLSSTMDQMSSRAASASPYTPEHAASVPTHSPYAQPSSTFDTM 60
Query: 61 SPAPVIPSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPP 120
SPAPVIPSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPP
Sbjct: 61 SPAPVIPSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPP 120
Query: 121 PPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDP 180
PPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDP
Sbjct: 121 PPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDP 180
Query: 181 VTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRDGQVLGRRS 240
VTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRDGQVLGRRS
Sbjct: 181 VTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRDGQVLGRRS 240
Query: 241 FEGRICACPGRDRKADEDHYREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRH 300
FEGRICACPGRDRKADEDHYREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRH
Sbjct: 241 FEGRICACPGRDRKADEDHYREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRH 300
Query: 301 GDEDTYYLQVRGRENFEILMKLKESLELMELVPQPLVDSYRQQQQLLQRPPRDAQQPWPR 360
GDEDTYYLQVRGRENFEILMKLKESLELMELVPQPLVDSYRQQQQLLQRPPRDAQQPWPR
Sbjct: 301 GDEDTYYLQVRGRENFEILMKLKESLELMELVPQPLVDSYRQQQQLLQRPPRDAQQPWPR 360
Query: 361 SASQRRDEQQPQRPVHGLGVPLHSATPLPRRPQPRQFFNRIGVSKLHRVFHLPRVTEHLP 420
SASQRRDEQQPQRPVHGLGVPLHSATPLPRRPQPRQFFNRIGVSKLHRVFHLPRVTEHLP
Sbjct: 361 SASQRRDEQQPQRPVHGLGVPLHSATPLPRRPQPRQFFNRIGVSKLHRVFHLPRVTEHLP 420
Query: 421 PAEPDH 426
PAEPDH
Sbjct: 421 PAEPDH 426
>gi|187829017 tumor protein p73 isoform c [Homo sapiens]
Length = 450
Score = 716 bits (1847), Expect = 0.0
Identities = 360/394 (91%), Positives = 362/394 (91%), Gaps = 7/394 (1%)
Query: 1 MLYVGDPARHLATAQFNLLSSTMDQMSSRAASASPYTPEHAASVPTHSPYAQPSSTFDTM 60
MLYVGDPARHLATAQFNLLSSTMDQMSSRAASASPYTPEHAASVPTHSPYAQPSSTFDTM
Sbjct: 1 MLYVGDPARHLATAQFNLLSSTMDQMSSRAASASPYTPEHAASVPTHSPYAQPSSTFDTM 60
Query: 61 SPAPVIPSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPP 120
SPAPVIPSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPP
Sbjct: 61 SPAPVIPSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPP 120
Query: 121 PPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDP 180
PPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDP
Sbjct: 121 PPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDP 180
Query: 181 VTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRDGQVLGRRS 240
VTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRDGQVLGRRS
Sbjct: 181 VTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRDGQVLGRRS 240
Query: 241 FEGRICACPGRDRKADEDHYREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRH 300
FEGRICACPGRDRKADEDHYREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRH
Sbjct: 241 FEGRICACPGRDRKADEDHYREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRH 300
Query: 301 GDEDTYYLQVRGRENFEILMKLKESLELMELVPQPLVDSYRQQQQLLQRPPRDAQQPWPR 360
GDEDTYYLQVRGRENFEILMKLKESLELMELVPQPLVDSYRQQQQLLQRP +
Sbjct: 301 GDEDTYYLQVRGRENFEILMKLKESLELMELVPQPLVDSYRQQQQLLQRPSHLQPPSYGP 360
Query: 361 SASQRRDEQQPQRPVHGLGVPLHSATPLPRRPQP 394
S P VHG L S L +P P
Sbjct: 361 VLS-------PMNKVHGGMNKLPSVNQLVGQPPP 387
>gi|187828902 tumor protein p73 isoform b [Homo sapiens]
Length = 587
Score = 716 bits (1847), Expect = 0.0
Identities = 360/394 (91%), Positives = 362/394 (91%), Gaps = 7/394 (1%)
Query: 1 MLYVGDPARHLATAQFNLLSSTMDQMSSRAASASPYTPEHAASVPTHSPYAQPSSTFDTM 60
MLYVGDPARHLATAQFNLLSSTMDQMSSRAASASPYTPEHAASVPTHSPYAQPSSTFDTM
Sbjct: 1 MLYVGDPARHLATAQFNLLSSTMDQMSSRAASASPYTPEHAASVPTHSPYAQPSSTFDTM 60
Query: 61 SPAPVIPSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPP 120
SPAPVIPSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPP
Sbjct: 61 SPAPVIPSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPP 120
Query: 121 PPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDP 180
PPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDP
Sbjct: 121 PPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDP 180
Query: 181 VTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRDGQVLGRRS 240
VTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRDGQVLGRRS
Sbjct: 181 VTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRDGQVLGRRS 240
Query: 241 FEGRICACPGRDRKADEDHYREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRH 300
FEGRICACPGRDRKADEDHYREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRH
Sbjct: 241 FEGRICACPGRDRKADEDHYREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRH 300
Query: 301 GDEDTYYLQVRGRENFEILMKLKESLELMELVPQPLVDSYRQQQQLLQRPPRDAQQPWPR 360
GDEDTYYLQVRGRENFEILMKLKESLELMELVPQPLVDSYRQQQQLLQRP +
Sbjct: 301 GDEDTYYLQVRGRENFEILMKLKESLELMELVPQPLVDSYRQQQQLLQRPSHLQPPSYGP 360
Query: 361 SASQRRDEQQPQRPVHGLGVPLHSATPLPRRPQP 394
S P VHG L S L +P P
Sbjct: 361 VLS-------PMNKVHGGMNKLPSVNQLVGQPPP 387
>gi|4885645 tumor protein p73 isoform a [Homo sapiens]
Length = 636
Score = 689 bits (1778), Expect = 0.0
Identities = 347/381 (91%), Positives = 349/381 (91%), Gaps = 7/381 (1%)
Query: 14 AQFNLLSSTMDQMSSRAASASPYTPEHAASVPTHSPYAQPSSTFDTMSPAPVIPSNTDYP 73
AQFNLLSSTMDQMSSRAASASPYTPEHAASVPTHSPYAQPSSTFDTMSPAPVIPSNTDYP
Sbjct: 63 AQFNLLSSTMDQMSSRAASASPYTPEHAASVPTHSPYAQPSSTFDTMSPAPVIPSNTDYP 122
Query: 74 GPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYK 133
GPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYK
Sbjct: 123 GPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYK 182
Query: 134 KAEHVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEP 193
KAEHVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEP
Sbjct: 183 KAEHVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEP 242
Query: 194 PQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRDGQVLGRRSFEGRICACPGRDR 253
PQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRDGQVLGRRSFEGRICACPGRDR
Sbjct: 243 PQVGTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRDGQVLGRRSFEGRICACPGRDR 302
Query: 254 KADEDHYREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRHGDEDTYYLQVRGR 313
KADEDHYREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRHGDEDTYYLQVRGR
Sbjct: 303 KADEDHYREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRHGDEDTYYLQVRGR 362
Query: 314 ENFEILMKLKESLELMELVPQPLVDSYRQQQQLLQRPPRDAQQPWPRSASQRRDEQQPQR 373
ENFEILMKLKESLELMELVPQPLVDSYRQQQQLLQRP + S P
Sbjct: 363 ENFEILMKLKESLELMELVPQPLVDSYRQQQQLLQRPSHLQPPSYGPVLS-------PMN 415
Query: 374 PVHGLGVPLHSATPLPRRPQP 394
VHG L S L +P P
Sbjct: 416 KVHGGMNKLPSVNQLVGQPPP 436
>gi|169234665 tumor protein p63 isoform 6 [Homo sapiens]
Length = 393
Score = 481 bits (1238), Expect = e-136
Identities = 235/329 (71%), Positives = 271/329 (82%), Gaps = 5/329 (1%)
Query: 18 LLSSTMDQMSSRAASASPYTPEHAA-SVPTHSPYAQPSSTFDTMSPAPVIPSNTDYPGPH 76
LL+S Q+ + ++S SPY +HA SV SPYAQPSSTFD +SP+P IPSNTDYPGPH
Sbjct: 22 LLNSMDQQIQNGSSSTSPYNTDHAQNSVTAPSPYAQPSSTFDALSPSPAIPSNTDYPGPH 81
Query: 77 HFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAE 136
F+V+FQQSSTAKSATWTYS LKKLYCQIAKTCPIQIKV TPPP G IRAMPVYKKAE
Sbjct: 82 SFDVSFQQSSTAKSATWTYSTELKKLYCQIAKTCPIQIKVMTPPPQGAVIRAMPVYKKAE 141
Query: 137 HVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQV 196
HVT+VVKRCPNHEL R+FNEGQ AP SHLIRVEGN+ +QYV+DP+TGRQSV+VPYEPPQV
Sbjct: 142 HVTEVVKRCPNHELSREFNEGQIAPPSHLIRVEGNSHAQYVEDPITGRQSVLVPYEPPQV 201
Query: 197 GTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRDGQVLGRRSFEGRICACPGRDRKAD 256
GTEFTT+LYNFMCNSSCVGGMNRRPILII+TLE RDGQVLGRR FE RICACPGRDRKAD
Sbjct: 202 GTEFTTVLYNFMCNSSCVGGMNRRPILIIVTLETRDGQVLGRRCFEARICACPGRDRKAD 261
Query: 257 EDHYREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRHGDEDTYYLQVRGRENF 316
ED R+QQ S KNG +KR F+Q+ + +KKRR D++ YL VRGRE +
Sbjct: 262 EDSIRKQQV--SDSTKNGDGTKRPFRQNTHGIQM--TSIKKRRSPDDELLYLPVRGRETY 317
Query: 317 EILMKLKESLELMELVPQPLVDSYRQQQQ 345
E+L+K+KESLELM+ +PQ +++YRQQQQ
Sbjct: 318 EMLLKIKESLELMQYLPQHTIETYRQQQQ 346
>gi|169234663 tumor protein p63 isoform 5 [Homo sapiens]
Length = 461
Score = 481 bits (1238), Expect = e-136
Identities = 235/329 (71%), Positives = 271/329 (82%), Gaps = 5/329 (1%)
Query: 18 LLSSTMDQMSSRAASASPYTPEHAA-SVPTHSPYAQPSSTFDTMSPAPVIPSNTDYPGPH 76
LL+S Q+ + ++S SPY +HA SV SPYAQPSSTFD +SP+P IPSNTDYPGPH
Sbjct: 22 LLNSMDQQIQNGSSSTSPYNTDHAQNSVTAPSPYAQPSSTFDALSPSPAIPSNTDYPGPH 81
Query: 77 HFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAE 136
F+V+FQQSSTAKSATWTYS LKKLYCQIAKTCPIQIKV TPPP G IRAMPVYKKAE
Sbjct: 82 SFDVSFQQSSTAKSATWTYSTELKKLYCQIAKTCPIQIKVMTPPPQGAVIRAMPVYKKAE 141
Query: 137 HVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQV 196
HVT+VVKRCPNHEL R+FNEGQ AP SHLIRVEGN+ +QYV+DP+TGRQSV+VPYEPPQV
Sbjct: 142 HVTEVVKRCPNHELSREFNEGQIAPPSHLIRVEGNSHAQYVEDPITGRQSVLVPYEPPQV 201
Query: 197 GTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRDGQVLGRRSFEGRICACPGRDRKAD 256
GTEFTT+LYNFMCNSSCVGGMNRRPILII+TLE RDGQVLGRR FE RICACPGRDRKAD
Sbjct: 202 GTEFTTVLYNFMCNSSCVGGMNRRPILIIVTLETRDGQVLGRRCFEARICACPGRDRKAD 261
Query: 257 EDHYREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRHGDEDTYYLQVRGRENF 316
ED R+QQ S KNG +KR F+Q+ + +KKRR D++ YL VRGRE +
Sbjct: 262 EDSIRKQQV--SDSTKNGDGTKRPFRQNTHGIQM--TSIKKRRSPDDELLYLPVRGRETY 317
Query: 317 EILMKLKESLELMELVPQPLVDSYRQQQQ 345
E+L+K+KESLELM+ +PQ +++YRQQQQ
Sbjct: 318 EMLLKIKESLELMQYLPQHTIETYRQQQQ 346
>gi|169234661 tumor protein p63 isoform 4 [Homo sapiens]
Length = 586
Score = 481 bits (1238), Expect = e-136
Identities = 235/329 (71%), Positives = 271/329 (82%), Gaps = 5/329 (1%)
Query: 18 LLSSTMDQMSSRAASASPYTPEHAA-SVPTHSPYAQPSSTFDTMSPAPVIPSNTDYPGPH 76
LL+S Q+ + ++S SPY +HA SV SPYAQPSSTFD +SP+P IPSNTDYPGPH
Sbjct: 22 LLNSMDQQIQNGSSSTSPYNTDHAQNSVTAPSPYAQPSSTFDALSPSPAIPSNTDYPGPH 81
Query: 77 HFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAE 136
F+V+FQQSSTAKSATWTYS LKKLYCQIAKTCPIQIKV TPPP G IRAMPVYKKAE
Sbjct: 82 SFDVSFQQSSTAKSATWTYSTELKKLYCQIAKTCPIQIKVMTPPPQGAVIRAMPVYKKAE 141
Query: 137 HVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQV 196
HVT+VVKRCPNHEL R+FNEGQ AP SHLIRVEGN+ +QYV+DP+TGRQSV+VPYEPPQV
Sbjct: 142 HVTEVVKRCPNHELSREFNEGQIAPPSHLIRVEGNSHAQYVEDPITGRQSVLVPYEPPQV 201
Query: 197 GTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRDGQVLGRRSFEGRICACPGRDRKAD 256
GTEFTT+LYNFMCNSSCVGGMNRRPILII+TLE RDGQVLGRR FE RICACPGRDRKAD
Sbjct: 202 GTEFTTVLYNFMCNSSCVGGMNRRPILIIVTLETRDGQVLGRRCFEARICACPGRDRKAD 261
Query: 257 EDHYREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRHGDEDTYYLQVRGRENF 316
ED R+QQ S KNG +KR F+Q+ + +KKRR D++ YL VRGRE +
Sbjct: 262 EDSIRKQQV--SDSTKNGDGTKRPFRQNTHGIQM--TSIKKRRSPDDELLYLPVRGRETY 317
Query: 317 EILMKLKESLELMELVPQPLVDSYRQQQQ 345
E+L+K+KESLELM+ +PQ +++YRQQQQ
Sbjct: 318 EMLLKIKESLELMQYLPQHTIETYRQQQQ 346
>gi|169234659 tumor protein p63 isoform 3 [Homo sapiens]
Length = 487
Score = 481 bits (1238), Expect = e-136
Identities = 235/329 (71%), Positives = 271/329 (82%), Gaps = 5/329 (1%)
Query: 18 LLSSTMDQMSSRAASASPYTPEHAA-SVPTHSPYAQPSSTFDTMSPAPVIPSNTDYPGPH 76
LL+S Q+ + ++S SPY +HA SV SPYAQPSSTFD +SP+P IPSNTDYPGPH
Sbjct: 116 LLNSMDQQIQNGSSSTSPYNTDHAQNSVTAPSPYAQPSSTFDALSPSPAIPSNTDYPGPH 175
Query: 77 HFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAE 136
F+V+FQQSSTAKSATWTYS LKKLYCQIAKTCPIQIKV TPPP G IRAMPVYKKAE
Sbjct: 176 SFDVSFQQSSTAKSATWTYSTELKKLYCQIAKTCPIQIKVMTPPPQGAVIRAMPVYKKAE 235
Query: 137 HVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQV 196
HVT+VVKRCPNHEL R+FNEGQ AP SHLIRVEGN+ +QYV+DP+TGRQSV+VPYEPPQV
Sbjct: 236 HVTEVVKRCPNHELSREFNEGQIAPPSHLIRVEGNSHAQYVEDPITGRQSVLVPYEPPQV 295
Query: 197 GTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRDGQVLGRRSFEGRICACPGRDRKAD 256
GTEFTT+LYNFMCNSSCVGGMNRRPILII+TLE RDGQVLGRR FE RICACPGRDRKAD
Sbjct: 296 GTEFTTVLYNFMCNSSCVGGMNRRPILIIVTLETRDGQVLGRRCFEARICACPGRDRKAD 355
Query: 257 EDHYREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRHGDEDTYYLQVRGRENF 316
ED R+QQ S KNG +KR F+Q+ + +KKRR D++ YL VRGRE +
Sbjct: 356 EDSIRKQQV--SDSTKNGDGTKRPFRQNTHGIQM--TSIKKRRSPDDELLYLPVRGRETY 411
Query: 317 EILMKLKESLELMELVPQPLVDSYRQQQQ 345
E+L+K+KESLELM+ +PQ +++YRQQQQ
Sbjct: 412 EMLLKIKESLELMQYLPQHTIETYRQQQQ 440
>gi|169234657 tumor protein p63 isoform 2 [Homo sapiens]
Length = 555
Score = 481 bits (1238), Expect = e-136
Identities = 235/329 (71%), Positives = 271/329 (82%), Gaps = 5/329 (1%)
Query: 18 LLSSTMDQMSSRAASASPYTPEHAA-SVPTHSPYAQPSSTFDTMSPAPVIPSNTDYPGPH 76
LL+S Q+ + ++S SPY +HA SV SPYAQPSSTFD +SP+P IPSNTDYPGPH
Sbjct: 116 LLNSMDQQIQNGSSSTSPYNTDHAQNSVTAPSPYAQPSSTFDALSPSPAIPSNTDYPGPH 175
Query: 77 HFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAE 136
F+V+FQQSSTAKSATWTYS LKKLYCQIAKTCPIQIKV TPPP G IRAMPVYKKAE
Sbjct: 176 SFDVSFQQSSTAKSATWTYSTELKKLYCQIAKTCPIQIKVMTPPPQGAVIRAMPVYKKAE 235
Query: 137 HVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQV 196
HVT+VVKRCPNHEL R+FNEGQ AP SHLIRVEGN+ +QYV+DP+TGRQSV+VPYEPPQV
Sbjct: 236 HVTEVVKRCPNHELSREFNEGQIAPPSHLIRVEGNSHAQYVEDPITGRQSVLVPYEPPQV 295
Query: 197 GTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRDGQVLGRRSFEGRICACPGRDRKAD 256
GTEFTT+LYNFMCNSSCVGGMNRRPILII+TLE RDGQVLGRR FE RICACPGRDRKAD
Sbjct: 296 GTEFTTVLYNFMCNSSCVGGMNRRPILIIVTLETRDGQVLGRRCFEARICACPGRDRKAD 355
Query: 257 EDHYREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRHGDEDTYYLQVRGRENF 316
ED R+QQ S KNG +KR F+Q+ + +KKRR D++ YL VRGRE +
Sbjct: 356 EDSIRKQQV--SDSTKNGDGTKRPFRQNTHGIQM--TSIKKRRSPDDELLYLPVRGRETY 411
Query: 317 EILMKLKESLELMELVPQPLVDSYRQQQQ 345
E+L+K+KESLELM+ +PQ +++YRQQQQ
Sbjct: 412 EMLLKIKESLELMQYLPQHTIETYRQQQQ 440
>gi|31543818 tumor protein p63 isoform 1 [Homo sapiens]
Length = 680
Score = 481 bits (1238), Expect = e-136
Identities = 235/329 (71%), Positives = 271/329 (82%), Gaps = 5/329 (1%)
Query: 18 LLSSTMDQMSSRAASASPYTPEHAA-SVPTHSPYAQPSSTFDTMSPAPVIPSNTDYPGPH 76
LL+S Q+ + ++S SPY +HA SV SPYAQPSSTFD +SP+P IPSNTDYPGPH
Sbjct: 116 LLNSMDQQIQNGSSSTSPYNTDHAQNSVTAPSPYAQPSSTFDALSPSPAIPSNTDYPGPH 175
Query: 77 HFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAE 136
F+V+FQQSSTAKSATWTYS LKKLYCQIAKTCPIQIKV TPPP G IRAMPVYKKAE
Sbjct: 176 SFDVSFQQSSTAKSATWTYSTELKKLYCQIAKTCPIQIKVMTPPPQGAVIRAMPVYKKAE 235
Query: 137 HVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQV 196
HVT+VVKRCPNHEL R+FNEGQ AP SHLIRVEGN+ +QYV+DP+TGRQSV+VPYEPPQV
Sbjct: 236 HVTEVVKRCPNHELSREFNEGQIAPPSHLIRVEGNSHAQYVEDPITGRQSVLVPYEPPQV 295
Query: 197 GTEFTTILYNFMCNSSCVGGMNRRPILIIITLEMRDGQVLGRRSFEGRICACPGRDRKAD 256
GTEFTT+LYNFMCNSSCVGGMNRRPILII+TLE RDGQVLGRR FE RICACPGRDRKAD
Sbjct: 296 GTEFTTVLYNFMCNSSCVGGMNRRPILIIVTLETRDGQVLGRRCFEARICACPGRDRKAD 355
Query: 257 EDHYREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRHGDEDTYYLQVRGRENF 316
ED R+QQ S KNG +KR F+Q+ + +KKRR D++ YL VRGRE +
Sbjct: 356 EDSIRKQQV--SDSTKNGDGTKRPFRQNTHGIQM--TSIKKRRSPDDELLYLPVRGRETY 411
Query: 317 EILMKLKESLELMELVPQPLVDSYRQQQQ 345
E+L+K+KESLELM+ +PQ +++YRQQQQ
Sbjct: 412 EMLLKIKESLELMQYLPQHTIETYRQQQQ 440
>gi|187830777 tumor protein p53 isoform a [Homo sapiens]
Length = 393
Score = 276 bits (705), Expect = 3e-74
Identities = 145/302 (48%), Positives = 199/302 (65%), Gaps = 18/302 (5%)
Query: 38 PEHAASVPTHSPYAQPSSTFDT-MSPAPV--------IPSNTDYPGPHHFEVTFQQSSTA 88
P+ A +P +P P+ T +PAP +PS Y G + F + F S TA
Sbjct: 60 PDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTA 119
Query: 89 KSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAEHVTDVVKRCPNH 148
KS T TYSP L K++CQ+AKTCP+Q+ V + PPPGT +RAM +YK+++H+T+VV+RCP+H
Sbjct: 120 KSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHH 179
Query: 149 ELGRDFNEGQSAPASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQVGTEFTTILYNFM 208
E D ++G AP HLIRVEGN +Y+DD T R SVVVPYEPP+VG++ TTI YN+M
Sbjct: 180 ERCSD-SDGL-APPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYM 237
Query: 209 CNSSCVGGMNRRPILIIITLEMRDGQVLGRRSFEGRICACPGRDRKADEDHYREQQALNE 268
CNSSC+GGMNRRPIL IITLE G +LGR SFE R+CACPGRDR+ +E++ R++ +
Sbjct: 238 CNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHH 297
Query: 269 SSAKNGAASKRAFKQSPPAVPALGAGVKKRRHGDEDTYYLQVRGRENFEILMKLKESLEL 328
++KRA + + P K++ D + + LQ+RGRE FE+ +L E+LEL
Sbjct: 298 ELPP--GSTKRALPNNTSSSPQ-----PKKKPLDGEYFTLQIRGRERFEMFRELNEALEL 350
Query: 329 ME 330
+
Sbjct: 351 KD 352
>gi|120407068 tumor protein p53 isoform a [Homo sapiens]
Length = 393
Score = 276 bits (705), Expect = 3e-74
Identities = 145/302 (48%), Positives = 199/302 (65%), Gaps = 18/302 (5%)
Query: 38 PEHAASVPTHSPYAQPSSTFDT-MSPAPV--------IPSNTDYPGPHHFEVTFQQSSTA 88
P+ A +P +P P+ T +PAP +PS Y G + F + F S TA
Sbjct: 60 PDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTA 119
Query: 89 KSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAEHVTDVVKRCPNH 148
KS T TYSP L K++CQ+AKTCP+Q+ V + PPPGT +RAM +YK+++H+T+VV+RCP+H
Sbjct: 120 KSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHH 179
Query: 149 ELGRDFNEGQSAPASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQVGTEFTTILYNFM 208
E D ++G AP HLIRVEGN +Y+DD T R SVVVPYEPP+VG++ TTI YN+M
Sbjct: 180 ERCSD-SDGL-APPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYM 237
Query: 209 CNSSCVGGMNRRPILIIITLEMRDGQVLGRRSFEGRICACPGRDRKADEDHYREQQALNE 268
CNSSC+GGMNRRPIL IITLE G +LGR SFE R+CACPGRDR+ +E++ R++ +
Sbjct: 238 CNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHH 297
Query: 269 SSAKNGAASKRAFKQSPPAVPALGAGVKKRRHGDEDTYYLQVRGRENFEILMKLKESLEL 328
++KRA + + P K++ D + + LQ+RGRE FE+ +L E+LEL
Sbjct: 298 ELPP--GSTKRALPNNTSSSPQ-----PKKKPLDGEYFTLQIRGRERFEMFRELNEALEL 350
Query: 329 ME 330
+
Sbjct: 351 KD 352
>gi|187830855 tumor protein p53 isoform b [Homo sapiens]
Length = 341
Score = 254 bits (649), Expect = 1e-67
Identities = 132/268 (49%), Positives = 174/268 (64%), Gaps = 15/268 (5%)
Query: 38 PEHAASVPTHSPYAQPSSTFDT-MSPAPV--------IPSNTDYPGPHHFEVTFQQSSTA 88
P+ A +P +P P+ T +PAP +PS Y G + F + F S TA
Sbjct: 60 PDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTA 119
Query: 89 KSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAEHVTDVVKRCPNH 148
KS T TYSP L K++CQ+AKTCP+Q+ V + PPPGT +RAM +YK+++H+T+VV+RCP+H
Sbjct: 120 KSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHH 179
Query: 149 ELGRDFNEGQSAPASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQVGTEFTTILYNFM 208
E D ++G AP HLIRVEGN +Y+DD T R SVVVPYEPP+VG++ TTI YN+M
Sbjct: 180 ERCSD-SDGL-APPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYM 237
Query: 209 CNSSCVGGMNRRPILIIITLEMRDGQVLGRRSFEGRICACPGRDRKADEDHYREQ----Q 264
CNSSC+GGMNRRPIL IITLE G +LGR SFE R+CACPGRDR+ +E++ R++
Sbjct: 238 CNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHH 297
Query: 265 ALNESSAKNGAASKRAFKQSPPAVPALG 292
L S K + + P P G
Sbjct: 298 ELPPGSTKRALPNNTSSSPQPKKKPLDG 325
>gi|187830823 tumor protein p53 isoform c [Homo sapiens]
Length = 346
Score = 254 bits (649), Expect = 1e-67
Identities = 132/268 (49%), Positives = 174/268 (64%), Gaps = 15/268 (5%)
Query: 38 PEHAASVPTHSPYAQPSSTFDT-MSPAPV--------IPSNTDYPGPHHFEVTFQQSSTA 88
P+ A +P +P P+ T +PAP +PS Y G + F + F S TA
Sbjct: 60 PDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGFRLGFLHSGTA 119
Query: 89 KSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAEHVTDVVKRCPNH 148
KS T TYSP L K++CQ+AKTCP+Q+ V + PPPGT +RAM +YK+++H+T+VV+RCP+H
Sbjct: 120 KSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHH 179
Query: 149 ELGRDFNEGQSAPASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQVGTEFTTILYNFM 208
E D ++G AP HLIRVEGN +Y+DD T R SVVVPYEPP+VG++ TTI YN+M
Sbjct: 180 ERCSD-SDGL-APPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYM 237
Query: 209 CNSSCVGGMNRRPILIIITLEMRDGQVLGRRSFEGRICACPGRDRKADEDHYREQ----Q 264
CNSSC+GGMNRRPIL IITLE G +LGR SFE R+CACPGRDR+ +E++ R++
Sbjct: 238 CNSSCMGGMNRRPILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHH 297
Query: 265 ALNESSAKNGAASKRAFKQSPPAVPALG 292
L S K + + P P G
Sbjct: 298 ELPPGSTKRALPNNTSSSPQPKKKPLDG 325
>gi|187830894 tumor protein p53 isoform d [Homo sapiens]
Length = 261
Score = 236 bits (601), Expect = 4e-62
Identities = 118/229 (51%), Positives = 164/229 (71%), Gaps = 9/229 (3%)
Query: 102 LYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAP 161
++CQ+AKTCP+Q+ V + PPPGT +RAM +YK+++H+T+VV+RCP+HE D ++G AP
Sbjct: 1 MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSD-SDGL-AP 58
Query: 162 ASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRP 221
HLIRVEGN +Y+DD T R SVVVPYEPP+VG++ TTI YN+MCNSSC+GGMNRRP
Sbjct: 59 PQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRP 118
Query: 222 ILIIITLEMRDGQVLGRRSFEGRICACPGRDRKADEDHYREQQALNESSAKNGAASKRAF 281
IL IITLE G +LGR SFE R+CACPGRDR+ +E++ R++ + ++KRA
Sbjct: 119 ILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPP--GSTKRAL 176
Query: 282 KQSPPAVPALGAGVKKRRHGDEDTYYLQVRGRENFEILMKLKESLELME 330
+ + P K++ D + + LQ+RGRE FE+ +L E+LEL +
Sbjct: 177 PNNTSSSPQ-----PKKKPLDGEYFTLQIRGRERFEMFRELNEALELKD 220
>gi|187830909 tumor protein p53 isoform f [Homo sapiens]
Length = 214
Score = 214 bits (545), Expect = 1e-55
Identities = 105/195 (53%), Positives = 139/195 (71%), Gaps = 6/195 (3%)
Query: 102 LYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAP 161
++CQ+AKTCP+Q+ V + PPPGT +RAM +YK+++H+T+VV+RCP+HE D ++G AP
Sbjct: 1 MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSD-SDGL-AP 58
Query: 162 ASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRP 221
HLIRVEGN +Y+DD T R SVVVPYEPP+VG++ TTI YN+MCNSSC+GGMNRRP
Sbjct: 59 PQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRP 118
Query: 222 ILIIITLEMRDGQVLGRRSFEGRICACPGRDRKADEDHYREQ----QALNESSAKNGAAS 277
IL IITLE G +LGR SFE R+CACPGRDR+ +E++ R++ L S K +
Sbjct: 119 ILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPN 178
Query: 278 KRAFKQSPPAVPALG 292
+ P P G
Sbjct: 179 NTSSSPQPKKKPLDG 193
>gi|187830901 tumor protein p53 isoform e [Homo sapiens]
Length = 209
Score = 214 bits (545), Expect = 1e-55
Identities = 105/195 (53%), Positives = 139/195 (71%), Gaps = 6/195 (3%)
Query: 102 LYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAP 161
++CQ+AKTCP+Q+ V + PPPGT +RAM +YK+++H+T+VV+RCP+HE D ++G AP
Sbjct: 1 MFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHHERCSD-SDGL-AP 58
Query: 162 ASHLIRVEGNNLSQYVDDPVTGRQSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRP 221
HLIRVEGN +Y+DD T R SVVVPYEPP+VG++ TTI YN+MCNSSC+GGMNRRP
Sbjct: 59 PQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRRP 118
Query: 222 ILIIITLEMRDGQVLGRRSFEGRICACPGRDRKADEDHYREQ----QALNESSAKNGAAS 277
IL IITLE G +LGR SFE R+CACPGRDR+ +E++ R++ L S K +
Sbjct: 119 ILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPN 178
Query: 278 KRAFKQSPPAVPALG 292
+ P P G
Sbjct: 179 NTSSSPQPKKKPLDG 193
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
sapiens]
Length = 2462
Score = 44.3 bits (103), Expect = 2e-04
Identities = 26/114 (22%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 260 YREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRHGDEDTYYLQVRGRENFEIL 319
Y+++Q +N S + + F Q P + + ++++ + YY + EN++ L
Sbjct: 423 YKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSL 482
Query: 320 MKLKESLELMELVPQPLVDSYRQQQQLLQRPPRDAQQPWPRSASQRRDEQQPQR 373
++ S +QQQQ Q+ + QQP PRS+ + +DE++ ++
Sbjct: 483 VRRSYRRR---------GKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEK 527
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
sapiens]
Length = 2524
Score = 44.3 bits (103), Expect = 2e-04
Identities = 26/114 (22%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 260 YREQQALNESSAKNGAASKRAFKQSPPAVPALGAGVKKRRHGDEDTYYLQVRGRENFEIL 319
Y+++Q +N S + + F Q P + + ++++ + YY + EN++ L
Sbjct: 423 YKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSL 482
Query: 320 MKLKESLELMELVPQPLVDSYRQQQQLLQRPPRDAQQPWPRSASQRRDEQQPQR 373
++ S +QQQQ Q+ + QQP PRS+ + +DE++ ++
Sbjct: 483 VRRSYRRR---------GKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEK 527
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 39.3 bits (90), Expect = 0.007
Identities = 38/134 (28%), Positives = 53/134 (39%), Gaps = 10/134 (7%)
Query: 15 QFNLLSSTMDQMSSRAASASPYTPEHAASV---PTHSPYAQPSSTFDTMSPAP----VIP 67
Q LL ST+ S+ A P+ H SV P H P Q T PAP P
Sbjct: 360 QPELLKSTLPPPSTTPAPLPPHPHPHPHSVALPPAHLPVQQQQPQQKTPLPAPPPPPAAP 419
Query: 68 SNTDYPGPHHFEVTFQQSST--AKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPPGTA 125
+ T P P H T ST A +AT T++ +++ + + I P P A
Sbjct: 420 AQTLVPAPAHLVATAGGGSTVIAHTAT-THASVIQTVNHVLQGPGGKHIAHIAPSAPSPA 478
Query: 126 IRAMPVYKKAEHVT 139
++ P H+T
Sbjct: 479 VQLAPATPPIGHIT 492
>gi|157743257 POU domain, class 6, transcription factor 2 [Homo
sapiens]
Length = 691
Score = 38.1 bits (87), Expect = 0.015
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 314 ENFEILMKLKESLELMELVPQPLVDSYRQQQQLLQRPPRDAQQPWPRSASQRRDEQQPQR 373
+N + L L+ ++L Q +QQQQ Q PP Q P P + + +QQP +
Sbjct: 167 QNLQATSSLNSQLQQLQLQLQQ-----QQQQQQQQPPPSTNQHPQPAPQAPSQSQQQPLQ 221
Query: 374 PVHGLGVPLHSATP------LPRRPQPRQ 396
P P S P L + PQP+Q
Sbjct: 222 PTPPQQPPPASQQPPAPTSQLQQAPQPQQ 250
Score = 30.0 bits (66), Expect = 4.2
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
Query: 333 PQPLVDSYRQQQQLL----QRPPRDAQQPWPRSASQRRDEQQPQRPVHGLGVPLHSATPL 388
P P S QQQ L Q+PP +QQP P SQ + QPQ+ HS +
Sbjct: 207 PAPQAPSQSQQQPLQPTPPQQPPPASQQP-PAPTSQLQQAPQPQQH------QPHSHSQN 259
Query: 389 PRRPQPRQ 396
+P P Q
Sbjct: 260 QNQPSPTQ 267
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 34.7 bits (78), Expect = 0.17
Identities = 22/112 (19%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 313 RENFEILMKLKESLELMELVPQPLVDSYRQQQQLLQRPPRDAQQPWPRSASQRRDEQQPQ 372
++ F+ +++ ++ L+ + Q L+ + Q QQ +Q+ + Q+ Q++ +QQ Q
Sbjct: 197 QQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQ 256
Query: 373 RPVHGLGVPLHSATPLPRRPQPRQFFNRIGVSKLHRVFHLPRVTEHLPPAEP 424
+ + P QP+ ++ +L ++ H H PP +P
Sbjct: 257 QQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHH---TQHHQPPPQP 305
>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
Length = 748
Score = 34.7 bits (78), Expect = 0.17
Identities = 22/112 (19%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 313 RENFEILMKLKESLELMELVPQPLVDSYRQQQQLLQRPPRDAQQPWPRSASQRRDEQQPQ 372
++ F+ +++ ++ L+ + Q L+ + Q QQ +Q+ + Q+ Q++ +QQ Q
Sbjct: 197 QQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQ 256
Query: 373 RPVHGLGVPLHSATPLPRRPQPRQFFNRIGVSKLHRVFHLPRVTEHLPPAEP 424
+ + P QP+ ++ +L ++ H H PP +P
Sbjct: 257 QQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHH---TQHHQPPPQP 305
>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
sapiens]
Length = 1077
Score = 34.7 bits (78), Expect = 0.17
Identities = 32/124 (25%), Positives = 48/124 (38%), Gaps = 24/124 (19%)
Query: 8 ARHLATAQFNLLSSTMDQMSSRAASAS-PYTPEHAASVPTHSPYAQPSSTFDTMSPAPVI 66
A+ A AQ + + Q+ ++A AS P T A +V T + + PSST T + A +
Sbjct: 233 AQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSV 292
Query: 67 PSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPPGTAI 126
P Q T SA +P + VSTP P T +
Sbjct: 293 AQTVSTPTT--------QDQTPSSAVSVATPT---------------VSVSTPAPTATPV 329
Query: 127 RAMP 130
+ +P
Sbjct: 330 QTVP 333
>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
sapiens]
Length = 1098
Score = 34.7 bits (78), Expect = 0.17
Identities = 32/124 (25%), Positives = 48/124 (38%), Gaps = 24/124 (19%)
Query: 8 ARHLATAQFNLLSSTMDQMSSRAASAS-PYTPEHAASVPTHSPYAQPSSTFDTMSPAPVI 66
A+ A AQ + + Q+ ++A AS P T A +V T + + PSST T + A +
Sbjct: 233 AQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSV 292
Query: 67 PSNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPPGTAI 126
P Q T SA +P + VSTP P T +
Sbjct: 293 AQTVSTPTT--------QDQTPSSAVSVATPT---------------VSVSTPAPTATPV 329
Query: 127 RAMP 130
+ +P
Sbjct: 330 QTVP 333
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 33.9 bits (76), Expect = 0.29
Identities = 50/217 (23%), Positives = 72/217 (33%), Gaps = 54/217 (24%)
Query: 18 LLSSTMDQMSSRAASASPYTPEHAASVPTHSPYAQPSSTFDT----------MSPAPVIP 67
+L S++ S S+S T T P PSS F T SP VI
Sbjct: 5230 VLPSSLPTFSVSTVSSSVLT--------TLRPTGFPSSHFSTPCFCRAFGQFFSPGEVIY 5281
Query: 68 SNTDYPGPHHFEVTFQQSSTAKSATWTYSPLLKKLYCQIAK---TCPIQIKVSTPPPPGT 124
+ TD G H + V Q +C I + CP ++PPP +
Sbjct: 5282 NKTDRAGCHFYAVCNQ-------------------HCDIDRFQGACP-----TSPPPVSS 5317
Query: 125 AIRAMPVYKKAEHVTDVVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLSQYVDDPVTGR 184
A + P C N R NE + + R G+N +D
Sbjct: 5318 APLSSP---------SPAPGCDNAIPLRQVNETWTLENCTVARCVGDNRVVLLDPKPVAN 5368
Query: 185 QSVVVPYEPPQVGTEFTTILYNFMCNSSCVGGMNRRP 221
+ V + P +V +++ C CVGG P
Sbjct: 5369 VTCVNKHLPIKVSDPSQPCDFHYECECECVGGRGITP 5405
>gi|31652242 transcription factor 20 isoform 2 [Homo sapiens]
Length = 1938
Score = 33.9 bits (76), Expect = 0.29
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 233 GQVLGRRSFEGRICACPGRDRKADEDHYREQQALNESSAKNGAASKRAFKQSPPAVPALG 292
G ++ R + GR+ G+D+ + ED A + NG A + + P P G
Sbjct: 605 GVIVSREAMTGRVEKPGGQDKGSQED----DPAATQRPPSNGGAKETSHASLPQPEPPGG 660
Query: 293 AGVKKRRHGDEDT 305
G K ++GD ++
Sbjct: 661 GGSKGNKNGDNNS 673
>gi|31652244 transcription factor 20 isoform 1 [Homo sapiens]
Length = 1960
Score = 33.9 bits (76), Expect = 0.29
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 233 GQVLGRRSFEGRICACPGRDRKADEDHYREQQALNESSAKNGAASKRAFKQSPPAVPALG 292
G ++ R + GR+ G+D+ + ED A + NG A + + P P G
Sbjct: 605 GVIVSREAMTGRVEKPGGQDKGSQED----DPAATQRPPSNGGAKETSHASLPQPEPPGG 660
Query: 293 AGVKKRRHGDEDT 305
G K ++GD ++
Sbjct: 661 GGSKGNKNGDNNS 673
>gi|110347429 mediator complex subunit 12 [Homo sapiens]
Length = 2177
Score = 33.5 bits (75), Expect = 0.38
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 341 RQQQQLLQRPPRDAQQPWPRSASQRRDEQQPQRPVHGLGVPLHSATPLPRRPQPRQFFNR 400
+QQQQ + R + QQ + Q++ +QQ Q+ H +A P P +PQ + F R
Sbjct: 2081 QQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQAAPPQP-QPQSQPQFQR 2139
Query: 401 IGVSK 405
G+ +
Sbjct: 2140 QGLQQ 2144
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 33.5 bits (75), Expect = 0.38
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Query: 325 SLELMELVPQPLVDSYRQQQQLLQRPPRDAQQPWPRSASQRRDEQQ----PQRPVHGLGV 380
S LM L P L+ Y+Q QQ LQ + QQ + Q++ +QQ Q PV G
Sbjct: 3349 SQALMGLSPGSLLQQYQQYQQSLQEAIQQQQQRQLQQQQQQKVQQQQPKASQTPVPP-GA 3407
Query: 381 PLHSATPLPRRPQPRQ 396
P P P+P +
Sbjct: 3408 PSPDKDPAKESPKPEE 3423
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,573,328
Number of Sequences: 37866
Number of extensions: 1028507
Number of successful extensions: 4891
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 97
Number of HSP's that attempted gapping in prelim test: 4394
Number of HSP's gapped (non-prelim): 450
length of query: 426
length of database: 18,247,518
effective HSP length: 105
effective length of query: 321
effective length of database: 14,271,588
effective search space: 4581179748
effective search space used: 4581179748
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.