Guide to the Human Genome
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Name: TP63 Sequence: fasta or formatted (586aa) NCBI GI: 169234661
Description:

tumor protein p63 isoform 4

Referenced in:

p53 Pathway

Other entries for this name:
alt prot [555aa] tumor protein p63 isoform 2
alt prot [487aa] tumor protein p63 isoform 3
alt prot [461aa] tumor protein p63 isoform 5
alt prot [393aa] tumor protein p63 isoform 6
alt prot [680aa] tumor protein p63 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         27           1
 C cysteine            2.0         12           1
 D aspartate           4.4         26           2
 E glutamate           5.1         30           2
 F phenylalanine       2.9         17           1
 G glycine             4.9         29           2
 H histidine           2.9         17           1
 I isoleucine          5.3         31           2
 K lysine              3.9         23           2
 L leucine             7.3         43           2
 M methionine          3.4         20           2
 N asparagine          4.6         27           2
 P proline             8.9         52           4
 Q glutamine           7.7         45           6
 R arginine            5.8         34           2
 S serine             10.2         60           3
 T threonine           7.7         45           2
 V valine              4.3         25           2
 W tryptophan          0.5          3           1
 Y tyrosine            3.4         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor protein p63 isoform 4 
TP63                  0.976   tumor protein p63 isoform 1 
TP63                  0.776   tumor protein p63 isoform 5 
TP63                  0.752   tumor protein p63 isoform 2 
TP63                  0.597   tumor protein p63 isoform 6 
TP63                  0.574   tumor protein p63 isoform 3 
TP73                  0.543   tumor protein p73 isoform b 
TP73                  0.543   tumor protein p73 isoform a 
TP73                  0.438   tumor protein p73 isoform c 
TP73                  0.388   tumor protein p73 isoform d 
TP53                  0.211   tumor protein p53 isoform a 
TP53                  0.211   tumor protein p53 isoform a 
TP53                  0.194   tumor protein p53 isoform b 
TP53                  0.194   tumor protein p53 isoform c 
TP53                  0.180   tumor protein p53 isoform d 
TP53                  0.163   tumor protein p53 isoform f 
TP53                  0.163   tumor protein p53 isoform e 
TBKBP1                0.014   TBK1 binding protein 1 
MLL3                  0.013   myeloid/lymphoid or mixed-lineage leukemia 3 
ENAH                  0.013   enabled homolog isoform a 
ENAH                  0.013   enabled homolog isoform b 
FMN1                  0.011   formin 1 
TULP4                 0.011   tubby like protein 4 isoform 1 
NCOA6                 0.011   nuclear receptor coactivator 6 
MED15                 0.010   mediator complex subunit 15 isoform a 
MED15                 0.010   mediator complex subunit 15 isoform b 
SMARCA2               0.010   SWI/SNF-related matrix-associated actin-dependent re...
SMARCA2               0.010   SWI/SNF-related matrix-associated actin-dependent re...
NCOA3                 0.009   nuclear receptor coactivator 3 isoform b 
SRGAP1                0.009   SLIT-ROBO Rho GTPase activating protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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