Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: TP63 Sequence: fasta or formatted (487aa) NCBI GI: 169234659
Description:

tumor protein p63 isoform 3

Referenced in:

p53 Pathway

Other entries for this name:
alt prot [555aa] tumor protein p63 isoform 2
alt prot [586aa] tumor protein p63 isoform 4
alt prot [461aa] tumor protein p63 isoform 5
alt prot [393aa] tumor protein p63 isoform 6
alt prot [680aa] tumor protein p63 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         20           1
 C cysteine            2.7         13           1
 D aspartate           4.9         24           2
 E glutamate           6.4         31           1
 F phenylalanine       3.7         18           2
 G glycine             3.7         18           2
 H histidine           2.9         14           1
 I isoleucine          5.1         25           2
 K lysine              4.3         21           2
 L leucine             6.4         31           2
 M methionine          2.7         13           1
 N asparagine          4.1         20           1
 P proline             8.4         41           3
 Q glutamine           8.0         39           6
 R arginine            6.2         30           2
 S serine              9.4         46           3
 T threonine           7.0         34           2
 V valine              5.3         26           2
 W tryptophan          0.8          4           1
 Y tyrosine            3.9         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor protein p63 isoform 3 
TP63                  0.919   tumor protein p63 isoform 2 
TP63                  0.919   tumor protein p63 isoform 1 
TP63                  0.767   tumor protein p63 isoform 6 
TP63                  0.686   tumor protein p63 isoform 5 
TP63                  0.686   tumor protein p63 isoform 4 
TP73                  0.477   tumor protein p73 isoform a 
TP73                  0.465   tumor protein p73 isoform c 
TP73                  0.465   tumor protein p73 isoform b 
TP73                  0.464   tumor protein p73 isoform d 
TP53                  0.252   tumor protein p53 isoform a 
TP53                  0.252   tumor protein p53 isoform a 
TP53                  0.232   tumor protein p53 isoform b 
TP53                  0.232   tumor protein p53 isoform c 
TP53                  0.215   tumor protein p53 isoform d 
TP53                  0.194   tumor protein p53 isoform f 
TP53                  0.194   tumor protein p53 isoform e 
SAMD4A                0.010   sterile alpha motif domain containing 4 isoform 2 [...
SAMD4A                0.010   sterile alpha motif domain containing 4 isoform 1 [...
BRWD2                 0.010   bromodomain and WD repeat domain containing 2 
ABI3                  0.009   NESH protein isoform 2 
ABI3                  0.009   NESH protein isoform 1 
BMP2K                 0.009   BMP-2 inducible kinase isoform a 
BMP2K                 0.009   BMP-2 inducible kinase isoform b 
MUC17                 0.008   mucin 17 
CREBBP                0.008   CREB binding protein isoform b 
CREBBP                0.008   CREB binding protein isoform a 
TCHH                  0.008   trichohyalin 
DSP                   0.007   desmoplakin isoform I 
LOC284297             0.007   hypothetical protein LOC284297 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press