Guide to the Human Genome
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Name: TP63 Sequence: fasta or formatted (461aa) NCBI GI: 169234663
Description:

tumor protein p63 isoform 5

Referenced in:

p53 Pathway

Other entries for this name:
alt prot [555aa] tumor protein p63 isoform 2
alt prot [487aa] tumor protein p63 isoform 3
alt prot [586aa] tumor protein p63 isoform 4
alt prot [393aa] tumor protein p63 isoform 6
alt prot [680aa] tumor protein p63 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         21           1
 C cysteine            2.2         10           1
 D aspartate           3.7         17           2
 E glutamate           4.6         21           1
 F phenylalanine       2.0          9           1
 G glycine             5.0         23           2
 H histidine           2.6         12           1
 I isoleucine          5.2         24           2
 K lysine              4.1         19           2
 L leucine             6.9         32           2
 M methionine          3.9         18           2
 N asparagine          5.2         24           2
 P proline            10.2         47           4
 Q glutamine           8.5         39           6
 R arginine            5.0         23           2
 S serine              9.8         45           3
 T threonine           7.8         36           2
 V valine              4.8         22           2
 W tryptophan          0.4          2           1
 Y tyrosine            3.7         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor protein p63 isoform 5 
TP63                  0.988   tumor protein p63 isoform 4 
TP63                  0.970   tumor protein p63 isoform 2 
TP63                  0.958   tumor protein p63 isoform 1 
TP63                  0.759   tumor protein p63 isoform 6 
TP63                  0.730   tumor protein p63 isoform 3 
TP73                  0.564   tumor protein p73 isoform c 
TP73                  0.558   tumor protein p73 isoform b 
TP73                  0.558   tumor protein p73 isoform a 
TP73                  0.494   tumor protein p73 isoform d 
TP53                  0.269   tumor protein p53 isoform a 
TP53                  0.269   tumor protein p53 isoform a 
TP53                  0.247   tumor protein p53 isoform b 
TP53                  0.247   tumor protein p53 isoform c 
TP53                  0.229   tumor protein p53 isoform d 
TP53                  0.207   tumor protein p53 isoform f 
TP53                  0.207   tumor protein p53 isoform e 
TBKBP1                0.018   TBK1 binding protein 1 
MLL3                  0.016   myeloid/lymphoid or mixed-lineage leukemia 3 
ENAH                  0.016   enabled homolog isoform a 
ENAH                  0.016   enabled homolog isoform b 
TULP4                 0.015   tubby like protein 4 isoform 1 
FMN1                  0.014   formin 1 
NCOA6                 0.014   nuclear receptor coactivator 6 
MED15                 0.013   mediator complex subunit 15 isoform a 
MED15                 0.013   mediator complex subunit 15 isoform b 
SMARCA2               0.013   SWI/SNF-related matrix-associated actin-dependent re...
SMARCA2               0.013   SWI/SNF-related matrix-associated actin-dependent re...
NCOA3                 0.012   nuclear receptor coactivator 3 isoform b 
SRGAP1                0.011   SLIT-ROBO Rho GTPase activating protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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