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Search of human proteins with 187171277
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|187171277 DNA-directed DNA polymerase gamma [Homo sapiens]
(1239 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|187171277 DNA-directed DNA polymerase gamma [Homo sapiens] 2554 0.0
gi|4505937 DNA-directed DNA polymerase gamma [Homo sapiens] 2554 0.0
gi|33286444 mastermind-like 2 [Homo sapiens] 46 2e-04
gi|239757877 PREDICTED: FERM and PDZ domain containing 3 [Homo s... 46 3e-04
gi|89060961 PREDICTED: FERM and PDZ domain containing 3 [Homo sa... 46 3e-04
gi|89059963 PREDICTED: FERM and PDZ domain containing 3 [Homo sa... 46 3e-04
gi|119943102 CREB binding protein isoform b [Homo sapiens] 45 4e-04
gi|119943104 CREB binding protein isoform a [Homo sapiens] 45 4e-04
gi|55750053 atrophin-1 [Homo sapiens] 44 0.001
gi|55750041 atrophin-1 [Homo sapiens] 44 0.001
gi|55956910 meningioma 1 [Homo sapiens] 44 0.001
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 43 0.002
gi|17017963 forkhead box P2 isoform I [Homo sapiens] 42 0.004
gi|22538413 forkhead box P2 isoform III [Homo sapiens] 42 0.004
gi|149999352 forkhead box P2 isoform II [Homo sapiens] 42 0.004
gi|56549696 E1A binding protein p400 [Homo sapiens] 42 0.004
gi|40354197 THAP domain containing 11 [Homo sapiens] 42 0.004
gi|148922920 DENN/MADD domain containing 4B [Homo sapiens] 42 0.004
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 42 0.005
gi|10863899 numb homolog (Drosophila)-like [Homo sapiens] 42 0.005
gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens] 41 0.006
gi|4507379 TATA box binding protein [Homo sapiens] 41 0.008
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 41 0.008
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 41 0.008
gi|171543895 ataxin 2 [Homo sapiens] 41 0.008
gi|110347429 mediator complex subunit 12 [Homo sapiens] 41 0.008
gi|38158015 mastermind-like 3 [Homo sapiens] 41 0.008
gi|116805330 small conductance calcium-activated potassium chann... 40 0.014
gi|27886520 nuclear factor of activated T-cells 5 isoform a [Hom... 40 0.014
gi|5729945 nuclear factor of activated T-cells 5 isoform c [Homo... 40 0.014
>gi|187171277 DNA-directed DNA polymerase gamma [Homo sapiens]
Length = 1239
Score = 2554 bits (6619), Expect = 0.0
Identities = 1239/1239 (100%), Positives = 1239/1239 (100%)
Query: 1 MSRLLWRKVAGATVGPGPVPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQ 60
MSRLLWRKVAGATVGPGPVPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQ
Sbjct: 1 MSRLLWRKVAGATVGPGPVPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQ 60
Query: 61 VLSSEGGQLRHNPLDIQMLSRGLHEQIFGQGGEMPGEAAVRRSVEHLQKHGLWGQPAVPL 120
VLSSEGGQLRHNPLDIQMLSRGLHEQIFGQGGEMPGEAAVRRSVEHLQKHGLWGQPAVPL
Sbjct: 61 VLSSEGGQLRHNPLDIQMLSRGLHEQIFGQGGEMPGEAAVRRSVEHLQKHGLWGQPAVPL 120
Query: 121 PDVELRLPPLYGDNLDQHFRLLAQKQSLPYLEAANLLLQAQLPPKPPAWAWAEGWTRYGP 180
PDVELRLPPLYGDNLDQHFRLLAQKQSLPYLEAANLLLQAQLPPKPPAWAWAEGWTRYGP
Sbjct: 121 PDVELRLPPLYGDNLDQHFRLLAQKQSLPYLEAANLLLQAQLPPKPPAWAWAEGWTRYGP 180
Query: 181 EGEAVPVAIPEERALVFDVEVCLAEGTCPTLAVAISPSAWYSWCSQRLVEERYSWTSQLS 240
EGEAVPVAIPEERALVFDVEVCLAEGTCPTLAVAISPSAWYSWCSQRLVEERYSWTSQLS
Sbjct: 181 EGEAVPVAIPEERALVFDVEVCLAEGTCPTLAVAISPSAWYSWCSQRLVEERYSWTSQLS 240
Query: 241 PADLIPLEVPTGASSPTQRDWQEQLVVGHNVSFDRAHIREQYLIQGSRMRFLDTMSMHMA 300
PADLIPLEVPTGASSPTQRDWQEQLVVGHNVSFDRAHIREQYLIQGSRMRFLDTMSMHMA
Sbjct: 241 PADLIPLEVPTGASSPTQRDWQEQLVVGHNVSFDRAHIREQYLIQGSRMRFLDTMSMHMA 300
Query: 301 ISGLSSFQRSLWIAAKQGKHKVQPPTKQGQKSQRKARRGPAISSWDWLDISSVNSLAEVH 360
ISGLSSFQRSLWIAAKQGKHKVQPPTKQGQKSQRKARRGPAISSWDWLDISSVNSLAEVH
Sbjct: 301 ISGLSSFQRSLWIAAKQGKHKVQPPTKQGQKSQRKARRGPAISSWDWLDISSVNSLAEVH 360
Query: 361 RLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATHEVFQQQLPLFLERCPH 420
RLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATHEVFQQQLPLFLERCPH
Sbjct: 361 RLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATHEVFQQQLPLFLERCPH 420
Query: 421 PVTLAGMLEMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYK 480
PVTLAGMLEMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYK
Sbjct: 421 PVTLAGMLEMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYK 480
Query: 481 EDPWLWDLEWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQ 540
EDPWLWDLEWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQ
Sbjct: 481 EDPWLWDLEWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQ 540
Query: 541 QDVMARACLQKLKGTTELLPKRPQHLPGHPGWYRKLCPRLDDPAWTPGPSLLSLQMRVTP 600
QDVMARACLQKLKGTTELLPKRPQHLPGHPGWYRKLCPRLDDPAWTPGPSLLSLQMRVTP
Sbjct: 541 QDVMARACLQKLKGTTELLPKRPQHLPGHPGWYRKLCPRLDDPAWTPGPSLLSLQMRVTP 600
Query: 601 KLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGVVCPYRAIESLYRKHC 660
KLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGVVCPYRAIESLYRKHC
Sbjct: 601 KLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGVVCPYRAIESLYRKHC 660
Query: 661 LEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKMENLRAAVPGQPLALT 720
LEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKMENLRAAVPGQPLALT
Sbjct: 661 LEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKMENLRAAVPGQPLALT 720
Query: 721 ARGGPKDTQPSYHHGNGPYNDVDIPGCWFFKLPHKDGNSCNVGSPFAKDFLPKMEDGTLQ 780
ARGGPKDTQPSYHHGNGPYNDVDIPGCWFFKLPHKDGNSCNVGSPFAKDFLPKMEDGTLQ
Sbjct: 721 ARGGPKDTQPSYHHGNGPYNDVDIPGCWFFKLPHKDGNSCNVGSPFAKDFLPKMEDGTLQ 780
Query: 781 AGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRAVIRHPDYDEEGLYGAI 840
AGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRAVIRHPDYDEEGLYGAI
Sbjct: 781 AGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRAVIRHPDYDEEGLYGAI 840
Query: 841 LPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYTLVGADVDSQELWIAA 900
LPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYTLVGADVDSQELWIAA
Sbjct: 841 LPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYTLVGADVDSQELWIAA 900
Query: 901 VLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISREHAKIFNYGRIYGAGQP 960
VLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISREHAKIFNYGRIYGAGQP
Sbjct: 901 VLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISREHAKIFNYGRIYGAGQP 960
Query: 961 FAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSDEGEWLVRELNLPVDRTEGGWI 1020
FAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSDEGEWLVRELNLPVDRTEGGWI
Sbjct: 961 FAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSDEGEWLVRELNLPVDRTEGGWI 1020
Query: 1021 SLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLESIATSDIPRTPVLGCCIS 1080
SLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLESIATSDIPRTPVLGCCIS
Sbjct: 1021 SLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLESIATSDIPRTPVLGCCIS 1080
Query: 1081 RALEPSAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYL 1140
RALEPSAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYL
Sbjct: 1081 RALEPSAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYL 1140
Query: 1141 VREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSAVDIDRCLRKEVTMDCKTP 1200
VREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSAVDIDRCLRKEVTMDCKTP
Sbjct: 1141 VREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSAVDIDRCLRKEVTMDCKTP 1200
Query: 1201 SNPTGMERRYGIPQGEALDIYQIIELTKGSLEKRSQPGP 1239
SNPTGMERRYGIPQGEALDIYQIIELTKGSLEKRSQPGP
Sbjct: 1201 SNPTGMERRYGIPQGEALDIYQIIELTKGSLEKRSQPGP 1239
>gi|4505937 DNA-directed DNA polymerase gamma [Homo sapiens]
Length = 1239
Score = 2554 bits (6619), Expect = 0.0
Identities = 1239/1239 (100%), Positives = 1239/1239 (100%)
Query: 1 MSRLLWRKVAGATVGPGPVPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQ 60
MSRLLWRKVAGATVGPGPVPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQ
Sbjct: 1 MSRLLWRKVAGATVGPGPVPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQ 60
Query: 61 VLSSEGGQLRHNPLDIQMLSRGLHEQIFGQGGEMPGEAAVRRSVEHLQKHGLWGQPAVPL 120
VLSSEGGQLRHNPLDIQMLSRGLHEQIFGQGGEMPGEAAVRRSVEHLQKHGLWGQPAVPL
Sbjct: 61 VLSSEGGQLRHNPLDIQMLSRGLHEQIFGQGGEMPGEAAVRRSVEHLQKHGLWGQPAVPL 120
Query: 121 PDVELRLPPLYGDNLDQHFRLLAQKQSLPYLEAANLLLQAQLPPKPPAWAWAEGWTRYGP 180
PDVELRLPPLYGDNLDQHFRLLAQKQSLPYLEAANLLLQAQLPPKPPAWAWAEGWTRYGP
Sbjct: 121 PDVELRLPPLYGDNLDQHFRLLAQKQSLPYLEAANLLLQAQLPPKPPAWAWAEGWTRYGP 180
Query: 181 EGEAVPVAIPEERALVFDVEVCLAEGTCPTLAVAISPSAWYSWCSQRLVEERYSWTSQLS 240
EGEAVPVAIPEERALVFDVEVCLAEGTCPTLAVAISPSAWYSWCSQRLVEERYSWTSQLS
Sbjct: 181 EGEAVPVAIPEERALVFDVEVCLAEGTCPTLAVAISPSAWYSWCSQRLVEERYSWTSQLS 240
Query: 241 PADLIPLEVPTGASSPTQRDWQEQLVVGHNVSFDRAHIREQYLIQGSRMRFLDTMSMHMA 300
PADLIPLEVPTGASSPTQRDWQEQLVVGHNVSFDRAHIREQYLIQGSRMRFLDTMSMHMA
Sbjct: 241 PADLIPLEVPTGASSPTQRDWQEQLVVGHNVSFDRAHIREQYLIQGSRMRFLDTMSMHMA 300
Query: 301 ISGLSSFQRSLWIAAKQGKHKVQPPTKQGQKSQRKARRGPAISSWDWLDISSVNSLAEVH 360
ISGLSSFQRSLWIAAKQGKHKVQPPTKQGQKSQRKARRGPAISSWDWLDISSVNSLAEVH
Sbjct: 301 ISGLSSFQRSLWIAAKQGKHKVQPPTKQGQKSQRKARRGPAISSWDWLDISSVNSLAEVH 360
Query: 361 RLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATHEVFQQQLPLFLERCPH 420
RLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATHEVFQQQLPLFLERCPH
Sbjct: 361 RLYVGGPPLEKEPRELFVKGTMKDIRENFQDLMQYCAQDVWATHEVFQQQLPLFLERCPH 420
Query: 421 PVTLAGMLEMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYK 480
PVTLAGMLEMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYK
Sbjct: 421 PVTLAGMLEMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDLANDACQLLSGERYK 480
Query: 481 EDPWLWDLEWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQ 540
EDPWLWDLEWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQ
Sbjct: 481 EDPWLWDLEWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQ 540
Query: 541 QDVMARACLQKLKGTTELLPKRPQHLPGHPGWYRKLCPRLDDPAWTPGPSLLSLQMRVTP 600
QDVMARACLQKLKGTTELLPKRPQHLPGHPGWYRKLCPRLDDPAWTPGPSLLSLQMRVTP
Sbjct: 541 QDVMARACLQKLKGTTELLPKRPQHLPGHPGWYRKLCPRLDDPAWTPGPSLLSLQMRVTP 600
Query: 601 KLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGVVCPYRAIESLYRKHC 660
KLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGVVCPYRAIESLYRKHC
Sbjct: 601 KLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGVVCPYRAIESLYRKHC 660
Query: 661 LEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKMENLRAAVPGQPLALT 720
LEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKMENLRAAVPGQPLALT
Sbjct: 661 LEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKMENLRAAVPGQPLALT 720
Query: 721 ARGGPKDTQPSYHHGNGPYNDVDIPGCWFFKLPHKDGNSCNVGSPFAKDFLPKMEDGTLQ 780
ARGGPKDTQPSYHHGNGPYNDVDIPGCWFFKLPHKDGNSCNVGSPFAKDFLPKMEDGTLQ
Sbjct: 721 ARGGPKDTQPSYHHGNGPYNDVDIPGCWFFKLPHKDGNSCNVGSPFAKDFLPKMEDGTLQ 780
Query: 781 AGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRAVIRHPDYDEEGLYGAI 840
AGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRAVIRHPDYDEEGLYGAI
Sbjct: 781 AGPGGASGPRALEINKMISFWRNAHKRISSQMVVWLPRSALPRAVIRHPDYDEEGLYGAI 840
Query: 841 LPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYTLVGADVDSQELWIAA 900
LPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYTLVGADVDSQELWIAA
Sbjct: 841 LPQVVTAGTITRRAVEPTWLTASNARPDRVGSELKAMVQAPPGYTLVGADVDSQELWIAA 900
Query: 901 VLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISREHAKIFNYGRIYGAGQP 960
VLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISREHAKIFNYGRIYGAGQP
Sbjct: 901 VLGDAHFAGMHGCTAFGWMTLQGRKSRGTDLHSKTATTVGISREHAKIFNYGRIYGAGQP 960
Query: 961 FAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSDEGEWLVRELNLPVDRTEGGWI 1020
FAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSDEGEWLVRELNLPVDRTEGGWI
Sbjct: 961 FAERLLMQFNHRLTQQEAAEKAQQMYAATKGLRWYRLSDEGEWLVRELNLPVDRTEGGWI 1020
Query: 1021 SLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLESIATSDIPRTPVLGCCIS 1080
SLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLESIATSDIPRTPVLGCCIS
Sbjct: 1021 SLQDLRKVQRETARKSQWKKWEVVAERAWKGGTESEMFNKLESIATSDIPRTPVLGCCIS 1080
Query: 1081 RALEPSAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYL 1140
RALEPSAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYL
Sbjct: 1081 RALEPSAVQEEFMTSRVNWVVQSSAVDYLHLMLVAMKWLFEEFAIDGRFCISIHDEVRYL 1140
Query: 1141 VREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSAVDIDRCLRKEVTMDCKTP 1200
VREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSAVDIDRCLRKEVTMDCKTP
Sbjct: 1141 VREEDRYRAALALQITNLLTRCMFAYKLGLNDLPQSVAFFSAVDIDRCLRKEVTMDCKTP 1200
Query: 1201 SNPTGMERRYGIPQGEALDIYQIIELTKGSLEKRSQPGP 1239
SNPTGMERRYGIPQGEALDIYQIIELTKGSLEKRSQPGP
Sbjct: 1201 SNPTGMERRYGIPQGEALDIYQIIELTKGSLEKRSQPGP 1239
>gi|33286444 mastermind-like 2 [Homo sapiens]
Length = 1156
Score = 46.2 bits (108), Expect = 2e-04
Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 19/149 (12%)
Query: 26 VSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQ---MLSRG 82
+S+ Q+++QQQQQQQQQQQQQP S L +PL +Q +L +
Sbjct: 636 ISAQQQQQQQQQQQQQQQQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPLPLQQKLLLQQM 695
Query: 83 LHEQIFGQGGEMPGEAAVRRSVEHLQKHGLWGQPAVPLPDVELRLPPLYGD---NLDQHF 139
++ I G G ++ + + +H + GQ P P P G N Q
Sbjct: 696 QNQPIAGMGYQVSQQ-------QRQDQHSVVGQNTGPSPSPNPCSNPNTGSGYMNSQQSL 748
Query: 140 ---RLLAQKQSLP---YLEAANLLLQAQL 162
+L+ +KQ+L + LLLQ Q+
Sbjct: 749 LNQQLMGKKQTLQRQIMEQKQQLLLQQQM 777
Score = 44.3 bits (103), Expect = 7e-04
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQMLSRGLHEQIFGQGGEMPGEA 98
Q+++QQQQQQQQQQQQQ QQ +S++ Q + + + Q + Q + +
Sbjct: 601 QQQQQQQQQQQQQQQQQQQQQSSISAQQQQQQQSSISAQQQQQ--------QQQQQQQQQ 652
Query: 99 AVRRSVEHLQKHGLWGQPAVPLPDVELRLPPLYGDNLDQHFRLLAQKQSLP 149
++ + Q+ QPA LP L PL L Q LL Q Q+ P
Sbjct: 653 QQQQQQQQQQQQQPSSQPAQSLPSQPLLRSPL---PLQQKL-LLQQMQNQP 699
>gi|239757877 PREDICTED: FERM and PDZ domain containing 3 [Homo
sapiens]
Length = 1662
Score = 45.8 bits (107), Expect = 3e-04
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNP 73
Q+++QQQQQQQQQQQQQ QQ QV ++ G H P
Sbjct: 1607 QQQQQQQQQQQQQQQQQQQQQQVAAAAGAATEHPP 1641
Score = 42.0 bits (97), Expect = 0.004
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNP 73
Q+++QQQQQQQQQQQQQ QQ Q +++ G +P
Sbjct: 1606 QQQQQQQQQQQQQQQQQQQQQQQVAAAAGAATEHP 1640
>gi|89060961 PREDICTED: FERM and PDZ domain containing 3 [Homo
sapiens]
Length = 1810
Score = 45.8 bits (107), Expect = 3e-04
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNP 73
Q+++QQQQQQQQQQQQQ QQ QV ++ G H P
Sbjct: 1755 QQQQQQQQQQQQQQQQQQQQQQVAAAAGAATEHPP 1789
Score = 42.0 bits (97), Expect = 0.004
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNP 73
Q+++QQQQQQQQQQQQQ QQ Q +++ G +P
Sbjct: 1754 QQQQQQQQQQQQQQQQQQQQQQQVAAAAGAATEHP 1788
>gi|89059963 PREDICTED: FERM and PDZ domain containing 3 [Homo
sapiens]
Length = 1810
Score = 45.8 bits (107), Expect = 3e-04
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNP 73
Q+++QQQQQQQQQQQQQ QQ QV ++ G H P
Sbjct: 1755 QQQQQQQQQQQQQQQQQQQQQQVAAAAGAATEHPP 1789
Score = 42.0 bits (97), Expect = 0.004
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNP 73
Q+++QQQQQQQQQQQQQ QQ Q +++ G +P
Sbjct: 1754 QQQQQQQQQQQQQQQQQQQQQQQVAAAAGAATEHP 1788
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 45.1 bits (105), Expect = 4e-04
Identities = 41/115 (35%), Positives = 52/115 (45%), Gaps = 17/115 (14%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQMLSRGLHEQIFGQGGEMPGEA 98
Q +QQQQQQQQQQQQQ QQ GG H G +Q G GG P
Sbjct: 2158 QLLQQQQQQQQQQQQQQQQQQGSAGMAGGMAGH----------GQFQQPQGPGGYPPAMQ 2207
Query: 99 AVRRSVEHLQKHG-LWGQPAVPLPDV-ELRLPPLYGD---NLDQHF--RLLAQKQ 146
+R +HL G GQ A + + ++ P L D N+ Q R+L Q+Q
Sbjct: 2208 QQQRMQQHLPLQGSSMGQMAAQMGQLGQMGQPGLGADSTPNIQQALQQRILQQQQ 2262
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 45.1 bits (105), Expect = 4e-04
Identities = 41/115 (35%), Positives = 52/115 (45%), Gaps = 17/115 (14%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQMLSRGLHEQIFGQGGEMPGEA 98
Q +QQQQQQQQQQQQQ QQ GG H G +Q G GG P
Sbjct: 2196 QLLQQQQQQQQQQQQQQQQQQGSAGMAGGMAGH----------GQFQQPQGPGGYPPAMQ 2245
Query: 99 AVRRSVEHLQKHG-LWGQPAVPLPDV-ELRLPPLYGD---NLDQHF--RLLAQKQ 146
+R +HL G GQ A + + ++ P L D N+ Q R+L Q+Q
Sbjct: 2246 QQQRMQQHLPLQGSSMGQMAAQMGQLGQMGQPGLGADSTPNIQQALQQRILQQQQ 2300
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 43.9 bits (102), Expect = 0.001
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 7 RKVAGATVGPGPVP-APGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQ 58
R +A + PGP P + G ++ P S +++QQQQQQQQQQQQQ QQ
Sbjct: 450 RLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQ 502
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 43.9 bits (102), Expect = 0.001
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 7 RKVAGATVGPGPVP-APGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQ 58
R +A + PGP P + G ++ P S +++QQQQQQQQQQQQQ QQ
Sbjct: 450 RLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQ 502
>gi|55956910 meningioma 1 [Homo sapiens]
Length = 1320
Score = 43.5 bits (101), Expect = 0.001
Identities = 32/79 (40%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 16 PGPVPAPGRWVSSSVPASDP-----SDGQRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLR 70
PG P V S P+ P D Q +QQQQQQQQQQQQQ QQ Q + Q R
Sbjct: 495 PGEFTPP---VPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQR 551
Query: 71 HNP--LDIQMLSRGLHEQI 87
N + QM SR +++
Sbjct: 552 QNAALMIKQMASRNQQQRL 570
Score = 36.2 bits (82), Expect = 0.20
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQMLSRGLHEQIFGQGGEMPG 96
Q+++QQQQQQQQQQQQ+ ++ + + L L++ H GQGG + G
Sbjct: 535 QQQQQQQQQQQQQQQQRQNAALMIKQMASRNQQQRLRQPNLAQLGHPGDVGQGGLVHG 592
Score = 31.6 bits (70), Expect = 4.9
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 11 GATVGPGPVPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLR 70
GA G +P V S + P QQQ QQQQQ QQQ QQ V R
Sbjct: 268 GAFPGASAMPRAAGMVGLSKMHAQPP------QQQPQQQQQPQQQQQQHGVFFERFSGAR 321
Query: 71 HNPLDIQ 77
P+ ++
Sbjct: 322 KMPVGLE 328
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 43.1 bits (100), Expect = 0.002
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 33 SDPSDGQRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLR-HNPLDIQMLSRGLHEQIF 88
+D ++++QQQQQQQQQQQQQ QQ Q L+ Q++ H ++Q + + Q+F
Sbjct: 1716 ADMIASRQQQQQQQQQQQQQQQQQQQAQTLAQAQAQVQAHLQQELQQQAALIQSQLF 1772
Score = 35.0 bits (79), Expect = 0.44
Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Query: 19 VPAPGRWVS------SSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQV 61
VP+PG S SS S P+ Q QQ QQQQQ QQPQV
Sbjct: 3159 VPSPGLPTSGLPNKPSSASLSSPTPAQATMAMGPQQPPQQQQQQQQPQV 3207
Score = 31.6 bits (70), Expect = 4.9
Identities = 14/22 (63%), Positives = 18/22 (81%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
Q+R+ QQQQQQ+ QQQQP+ Q
Sbjct: 3379 QQRQLQQQQQQKVQQQQPKASQ 3400
Score = 31.2 bits (69), Expect = 6.4
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 18 PVPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQ 60
P A + ++ + + Q+++QQQQQQQQQQ Q Q Q
Sbjct: 1707 PKEANRKKLADMIASRQQQQQQQQQQQQQQQQQQQAQTLAQAQ 1749
Score = 30.8 bits (68), Expect = 8.4
Identities = 13/22 (59%), Positives = 19/22 (86%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
Q+++Q+Q QQQQQQ+ Q QQP+
Sbjct: 3376 QQQQQRQLQQQQQQKVQQQQPK 3397
>gi|17017963 forkhead box P2 isoform I [Homo sapiens]
Length = 715
Score = 42.0 bits (97), Expect = 0.004
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQMLSRGLHEQ-IFGQGGEMPGE 97
Q+++QQQQQQQQQQQQQ QQ Q G Q + Q + +Q +F Q +
Sbjct: 167 QQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQ 226
Query: 98 AAVRRSVEHLQKHGLW----GQPAVPL 120
++ + LQ+ GL GQ A+P+
Sbjct: 227 LQQQQHLLSLQRQGLISIPPGQAALPV 253
Score = 40.0 bits (92), Expect = 0.014
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNP 73
Q+++QQQQQQQQQQQQQ QQ Q + Q + +P
Sbjct: 159 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHP 193
Score = 38.5 bits (88), Expect = 0.040
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQMLSRGLHEQIFGQGGEMPGEA 98
Q+++QQQQQQQQQQQQQ QQ Q + Q +Q Q + PG+
Sbjct: 152 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ---------------QQQQQQQQQQHPGKQ 196
Query: 99 AVRRSVEHLQKHGLWGQPAVPLPDVELRLPPLYGDNLDQHFRLLA-QKQ---SLPYLEAA 154
A + + Q+ L Q V + L L Q LL+ Q+Q S+P +AA
Sbjct: 197 AKEQQQQQQQQQQLAAQQLV------FQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAA 250
Query: 155 ---NLLLQAQLPPKPPAWAWAE 173
L QA L P W E
Sbjct: 251 LPVQSLPQAGLSPAEIQQLWKE 272
Score = 31.2 bits (69), Expect = 6.4
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 38 GQRRRQQQQQQQQQQQQQPQ----QPQVLSSEGGQLRHNPLDIQ 77
G++ ++QQQQQQQQQQ Q Q Q+L + Q + + L +Q
Sbjct: 194 GKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQ 237
>gi|22538413 forkhead box P2 isoform III [Homo sapiens]
Length = 623
Score = 42.0 bits (97), Expect = 0.004
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQMLSRGLHEQ-IFGQGGEMPGE 97
Q+++QQQQQQQQQQQQQ QQ Q G Q + Q + +Q +F Q +
Sbjct: 75 QQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQ 134
Query: 98 AAVRRSVEHLQKHGLW----GQPAVPL 120
++ + LQ+ GL GQ A+P+
Sbjct: 135 LQQQQHLLSLQRQGLISIPPGQAALPV 161
Score = 40.0 bits (92), Expect = 0.014
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNP 73
Q+++QQQQQQQQQQQQQ QQ Q + Q + +P
Sbjct: 67 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHP 101
Score = 38.5 bits (88), Expect = 0.040
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQMLSRGLHEQIFGQGGEMPGEA 98
Q+++QQQQQQQQQQQQQ QQ Q + Q +Q Q + PG+
Sbjct: 60 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ---------------QQQQQQQQQQHPGKQ 104
Query: 99 AVRRSVEHLQKHGLWGQPAVPLPDVELRLPPLYGDNLDQHFRLLA-QKQ---SLPYLEAA 154
A + + Q+ L Q V + L L Q LL+ Q+Q S+P +AA
Sbjct: 105 AKEQQQQQQQQQQLAAQQLV------FQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAA 158
Query: 155 ---NLLLQAQLPPKPPAWAWAE 173
L QA L P W E
Sbjct: 159 LPVQSLPQAGLSPAEIQQLWKE 180
Score = 31.2 bits (69), Expect = 6.4
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 38 GQRRRQQQQQQQQQQQQQPQ----QPQVLSSEGGQLRHNPLDIQ 77
G++ ++QQQQQQQQQQ Q Q Q+L + Q + + L +Q
Sbjct: 102 GKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQ 145
>gi|149999352 forkhead box P2 isoform II [Homo sapiens]
Length = 740
Score = 42.0 bits (97), Expect = 0.004
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQMLSRGLHEQ-IFGQGGEMPGE 97
Q+++QQQQQQQQQQQQQ QQ Q G Q + Q + +Q +F Q +
Sbjct: 192 QQQQQQQQQQQQQQQQQQQQQQQQQHPGKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQ 251
Query: 98 AAVRRSVEHLQKHGLW----GQPAVPL 120
++ + LQ+ GL GQ A+P+
Sbjct: 252 LQQQQHLLSLQRQGLISIPPGQAALPV 278
Score = 40.0 bits (92), Expect = 0.014
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNP 73
Q+++QQQQQQQQQQQQQ QQ Q + Q + +P
Sbjct: 184 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHP 218
Score = 38.5 bits (88), Expect = 0.040
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQMLSRGLHEQIFGQGGEMPGEA 98
Q+++QQQQQQQQQQQQQ QQ Q + Q +Q Q + PG+
Sbjct: 177 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ---------------QQQQQQQQQQHPGKQ 221
Query: 99 AVRRSVEHLQKHGLWGQPAVPLPDVELRLPPLYGDNLDQHFRLLA-QKQ---SLPYLEAA 154
A + + Q+ L Q V + L L Q LL+ Q+Q S+P +AA
Sbjct: 222 AKEQQQQQQQQQQLAAQQLV------FQQQLLQMQQLQQQQHLLSLQRQGLISIPPGQAA 275
Query: 155 ---NLLLQAQLPPKPPAWAWAE 173
L QA L P W E
Sbjct: 276 LPVQSLPQAGLSPAEIQQLWKE 297
Score = 31.2 bits (69), Expect = 6.4
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 38 GQRRRQQQQQQQQQQQQQPQ----QPQVLSSEGGQLRHNPLDIQ 77
G++ ++QQQQQQQQQQ Q Q Q+L + Q + + L +Q
Sbjct: 219 GKQAKEQQQQQQQQQQLAAQQLVFQQQLLQMQQLQQQQHLLSLQ 262
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 42.0 bits (97), Expect = 0.004
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 17/115 (14%)
Query: 19 VPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQM 78
V PG+ ++ P+ Q RQQQQQQQQQQQQQ QQ Q + Q + Q+
Sbjct: 2702 VQLPGKTIT-------PAHFQLLRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTTTTSQV 2754
Query: 79 LSRGLHEQIFGQGGEMPGE--AAVRRSVEHL---QKHGLWGQPAVPLPDVELRLP 128
QI GQ + P + A + + EHL QK L P P P + P
Sbjct: 2755 QV----PQIQGQ-AQSPAQIKAVGKLTPEHLIKMQKQKLQMPPQPPPPQAQSAPP 2804
Score = 37.7 bits (86), Expect = 0.068
Identities = 20/48 (41%), Positives = 24/48 (50%)
Query: 16 PGPVPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQVLS 63
PG P + Q+++QQQQQQQQQQQQQ QQ S
Sbjct: 2705 PGKTITPAHFQLLRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTTTTS 2752
>gi|40354197 THAP domain containing 11 [Homo sapiens]
Length = 314
Score = 42.0 bits (97), Expect = 0.004
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 18 PVPAPGRWVSSSVPASDPSDG---QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNP 73
P P R V+ A P+ +RR+QQQQQQQQQQQQQ QQ Q + Q + +P
Sbjct: 77 PTIFPLRGVNERKVARRPAGAAAARRRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSSP 135
Score = 40.4 bits (93), Expect = 0.011
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHN 72
Q+++QQQQQQQQQQQQQ P +++ QL+ N
Sbjct: 115 QQQQQQQQQQQQQQQQQQSSPSASTAQTAQLQPN 148
>gi|148922920 DENN/MADD domain containing 4B [Homo sapiens]
Length = 1496
Score = 42.0 bits (97), Expect = 0.004
Identities = 41/124 (33%), Positives = 49/124 (39%), Gaps = 21/124 (16%)
Query: 3 RLLWRKVAGATVGPGPVPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQVL 62
RL W K+ +G P R RQQQQQQQQQQQQQ QQ QV
Sbjct: 871 RLRWAKLRNVVLGAAQFRQP----------------LRERQQQQQQQQQQQQQQQQEQVS 914
Query: 63 S-SEGGQLRHNP-LDIQMLSRGLHEQIFGQGGEMPGEAAVRRSVEHLQKHGLWGQPAVPL 120
+ E G + P L+ +R L Q G + A+ L K G G
Sbjct: 915 AHQEAGSSQAEPYLERPSPTRPLQRQTTWAGRSLRDPAS---PPGRLVKSGSLGSARGAQ 971
Query: 121 PDVE 124
P VE
Sbjct: 972 PTVE 975
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 41.6 bits (96), Expect = 0.005
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 31 PASDPSDGQRRRQQQQQQQQQQQQQPQQPQ 60
PA+ P Q+++QQQQQQQQQQQQQ QQ Q
Sbjct: 254 PANFPQLQQQQQQQQQQQQQQQQQQQQQQQ 283
Score = 40.0 bits (92), Expect = 0.014
Identities = 42/139 (30%), Positives = 55/139 (39%), Gaps = 23/139 (16%)
Query: 34 DPSDGQRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQMLSRGLHEQIFGQGGE 93
+P++ + +QQQQQQQQQQQQQ QQ Q + Q R Q +G+ Q F +
Sbjct: 253 NPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQGIRPQ-FTAPTQ 311
Query: 94 MPGEAAVRRSVEHLQKHGLWGQPAVPLPDVELRLPPLYGDNLDQHFRLLAQKQSLP---- 149
+P W Q LP L+ PP G +K LP
Sbjct: 312 VPVPPG-------------WNQ----LPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQ 354
Query: 150 -YLEAANLLLQAQLPPKPP 167
L+A L Q P PP
Sbjct: 355 QQLQARPSLATVQTPSHPP 373
Score = 38.5 bits (88), Expect = 0.040
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 18 PVPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQ 60
PV + ++ P Q+++QQQQQQQQQQQQQ QQ Q
Sbjct: 245 PVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQ 287
>gi|10863899 numb homolog (Drosophila)-like [Homo sapiens]
Length = 609
Score = 41.6 bits (96), Expect = 0.005
Identities = 32/77 (41%), Positives = 37/77 (48%), Gaps = 24/77 (31%)
Query: 10 AGATVGPGPVPAP---GRWVSSSVPAS---------DPSDGQR-----------RRQQQQ 46
AGA PGP PA W SVP + PS+ +R ++QQQQ
Sbjct: 374 AGAPA-PGPPPATTGTSAWGEPSVPPAAAFQPGHKRTPSEAERWLEEVSQVAKAQQQQQQ 432
Query: 47 QQQQQQQQQPQQPQVLS 63
QQQQQQQQQ QQ Q S
Sbjct: 433 QQQQQQQQQQQQQQAAS 449
>gi|33457336 chromosome 14 open reading frame 4 [Homo sapiens]
Length = 796
Score = 41.2 bits (95), Expect = 0.006
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 12/64 (18%)
Query: 16 PGPVPAPG------------RWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQVLS 63
PGP P G +++ A+ + Q+++QQQQQQQQQQQQQ QQ Q L+
Sbjct: 70 PGPPPPVGVKTVALSAKEAAAAAAAAAAAAAAAQQQQQQQQQQQQQQQQQQQQQQQQQLN 129
Query: 64 SEGG 67
G
Sbjct: 130 HVDG 133
Score = 40.0 bits (92), Expect = 0.014
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 13 TVGPGPVPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQVLSSEG 66
TV A +++ A+ Q+++QQQQQQQQQQQQQ QQ Q+ +G
Sbjct: 80 TVALSAKEAAAAAAAAAAAAAAAQQQQQQQQQQQQQQQQQQQQQQQQQLNHVDG 133
>gi|4507379 TATA box binding protein [Homo sapiens]
Length = 339
Score = 40.8 bits (94), Expect = 0.008
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 15 GPGPVPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQ 60
G G P P + +S + Q+++QQQQQQQQQQQQQ QQ Q
Sbjct: 35 GTGLTPQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQ 80
Score = 39.3 bits (90), Expect = 0.024
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQMLSRGLHEQIF-GQGGEMP 95
Q+++QQQQQQQQQQQQQ QQ Q + Q + + + + +Q G G+ P
Sbjct: 62 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQAP 119
Score = 37.7 bits (86), Expect = 0.068
Identities = 17/22 (77%), Positives = 20/22 (90%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
Q+++QQQQQQQQQQQQQ QQ Q
Sbjct: 61 QQQQQQQQQQQQQQQQQQQQQQ 82
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 40.8 bits (94), Expect = 0.008
Identities = 18/22 (81%), Positives = 21/22 (95%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
Q+++QQQQQQQQQQQQQ QQPQ
Sbjct: 219 QQQQQQQQQQQQQQQQQQQQPQ 240
Score = 39.3 bits (90), Expect = 0.024
Identities = 17/20 (85%), Positives = 20/20 (100%)
Query: 39 QRRRQQQQQQQQQQQQQPQQ 58
Q+++QQQQQQQQQQQQQPQQ
Sbjct: 222 QQQQQQQQQQQQQQQQQPQQ 241
Score = 39.3 bits (90), Expect = 0.024
Identities = 17/22 (77%), Positives = 20/22 (90%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
Q+++QQQQQQQQQ QQQP QPQ
Sbjct: 226 QQQQQQQQQQQQQPQQQPPQPQ 247
Score = 38.1 bits (87), Expect = 0.052
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 35 PSDGQRRRQQQQQQQQQQQQQPQQPQ 60
P Q+++QQQQQQQQQQQQQ QQ Q
Sbjct: 213 PGLQQQQQQQQQQQQQQQQQQQQQQQ 238
Score = 37.0 bits (84), Expect = 0.12
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 29 SVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQ 60
++P Q+++QQQQQQQQQQQQQ Q Q
Sbjct: 211 TLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQ 242
Score = 36.6 bits (83), Expect = 0.15
Identities = 16/21 (76%), Positives = 19/21 (90%)
Query: 39 QRRRQQQQQQQQQQQQQPQQP 59
Q+++QQQQQQQQQQQQ QQP
Sbjct: 223 QQQQQQQQQQQQQQQQPQQQP 243
Score = 32.0 bits (71), Expect = 3.8
Identities = 17/36 (47%), Positives = 20/36 (55%)
Query: 38 GQRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNP 73
G+R QQQQQQQQQQ QQ Q + Q + P
Sbjct: 208 GKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQP 243
Score = 31.6 bits (70), Expect = 4.9
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
Q+++QQQQQQ QQQ QPQ Q
Sbjct: 229 QQQQQQQQQQPQQQPPQPQTQQ 250
Score = 30.8 bits (68), Expect = 8.4
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 6/31 (19%)
Query: 39 QRRRQQQQQQQQQQQ------QQPQQPQVLS 63
Q+++QQQQQQQ QQQ QQ QQP +++
Sbjct: 228 QQQQQQQQQQQPQQQPPQPQTQQQQQPALVN 258
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 40.8 bits (94), Expect = 0.008
Identities = 18/22 (81%), Positives = 21/22 (95%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
Q+++QQQQQQQQQQQQQ QQPQ
Sbjct: 219 QQQQQQQQQQQQQQQQQQQQPQ 240
Score = 39.3 bits (90), Expect = 0.024
Identities = 17/20 (85%), Positives = 20/20 (100%)
Query: 39 QRRRQQQQQQQQQQQQQPQQ 58
Q+++QQQQQQQQQQQQQPQQ
Sbjct: 222 QQQQQQQQQQQQQQQQQPQQ 241
Score = 39.3 bits (90), Expect = 0.024
Identities = 17/22 (77%), Positives = 20/22 (90%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
Q+++QQQQQQQQQ QQQP QPQ
Sbjct: 226 QQQQQQQQQQQQQPQQQPPQPQ 247
Score = 38.1 bits (87), Expect = 0.052
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 35 PSDGQRRRQQQQQQQQQQQQQPQQPQ 60
P Q+++QQQQQQQQQQQQQ QQ Q
Sbjct: 213 PGLQQQQQQQQQQQQQQQQQQQQQQQ 238
Score = 37.0 bits (84), Expect = 0.12
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 29 SVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQ 60
++P Q+++QQQQQQQQQQQQQ Q Q
Sbjct: 211 TLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQ 242
Score = 36.6 bits (83), Expect = 0.15
Identities = 16/21 (76%), Positives = 19/21 (90%)
Query: 39 QRRRQQQQQQQQQQQQQPQQP 59
Q+++QQQQQQQQQQQQ QQP
Sbjct: 223 QQQQQQQQQQQQQQQQPQQQP 243
Score = 32.0 bits (71), Expect = 3.8
Identities = 17/36 (47%), Positives = 20/36 (55%)
Query: 38 GQRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNP 73
G+R QQQQQQQQQQ QQ Q + Q + P
Sbjct: 208 GKRTLPGLQQQQQQQQQQQQQQQQQQQQQQQPQQQP 243
Score = 31.6 bits (70), Expect = 4.9
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
Q+++QQQQQQ QQQ QPQ Q
Sbjct: 229 QQQQQQQQQQPQQQPPQPQTQQ 250
Score = 30.8 bits (68), Expect = 8.4
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 6/31 (19%)
Query: 39 QRRRQQQQQQQQQQQ------QQPQQPQVLS 63
Q+++QQQQQQQ QQQ QQ QQP +++
Sbjct: 228 QQQQQQQQQQQPQQQPPQPQTQQQQQPALVN 258
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 40.8 bits (94), Expect = 0.008
Identities = 18/25 (72%), Positives = 21/25 (84%)
Query: 35 PSDGQRRRQQQQQQQQQQQQQPQQP 59
P Q+++QQQQQQQQQQQQQ QQP
Sbjct: 165 PQQQQQQQQQQQQQQQQQQQQQQQP 189
Score = 40.0 bits (92), Expect = 0.014
Identities = 22/41 (53%), Positives = 24/41 (58%)
Query: 20 PAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQ 60
PAPG + P P + QQQQQQQQQQQQQ QQ Q
Sbjct: 143 PAPGCPRPACEPVYGPLTMSLKPQQQQQQQQQQQQQQQQQQ 183
Score = 38.5 bits (88), Expect = 0.040
Identities = 21/52 (40%), Positives = 25/52 (48%)
Query: 16 PGPVPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQVLSSEGG 67
P P G S P Q+++QQQQQQQQQQQQ P + GG
Sbjct: 150 PACEPVYGPLTMSLKPQQQQQQQQQQQQQQQQQQQQQQQPPPAAANVRKPGG 201
Score = 33.9 bits (76), Expect = 0.99
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNP 73
Q+++QQQQQQQQQQQ P V G L +P
Sbjct: 174 QQQQQQQQQQQQQQQPPPAAANVRKPGGSGLLASP 208
>gi|110347429 mediator complex subunit 12 [Homo sapiens]
Length = 2177
Score = 40.8 bits (94), Expect = 0.008
Identities = 22/43 (51%), Positives = 26/43 (60%)
Query: 18 PVPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQ 60
P+ A G A P Q+++QQQQQQQQQQQQQ QQ Q
Sbjct: 2032 PMSAQGVQAGVRSTAILPEQQQQQQQQQQQQQQQQQQQQQQQQ 2074
Score = 38.9 bits (89), Expect = 0.031
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 30 VPASDPSDGQRRRQQQQQQQQQQQQQPQQPQVLSSEGGQL 69
+P Q+++QQQQQQQQQQQQQ QQ + + Q+
Sbjct: 2048 LPEQQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQI 2087
Score = 38.5 bits (88), Expect = 0.040
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 26 VSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQ 60
V S+ + Q+++QQQQQQQQQQQQQ QQ Q
Sbjct: 2042 VRSTAILPEQQQQQQQQQQQQQQQQQQQQQQQQQQ 2076
Score = 38.5 bits (88), Expect = 0.040
Identities = 24/81 (29%), Positives = 37/81 (45%)
Query: 41 RRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQMLSRGLHEQIFGQGGEMPGEAAV 100
++QQQQQQQQQQQQQ QQ Q + +R + + +Q Q + +
Sbjct: 2051 QQQQQQQQQQQQQQQQQQQQQQQQQQYHIRQQQQQQILRQQQQQQQQQQQQQQQQQQQQQ 2110
Query: 101 RRSVEHLQKHGLWGQPAVPLP 121
++ +H Q+ P P P
Sbjct: 2111 QQQQQHQQQQQQQAAPPQPQP 2131
Score = 37.7 bits (86), Expect = 0.068
Identities = 17/22 (77%), Positives = 20/22 (90%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
Q+++QQQQQQQQQQQQQ QQ Q
Sbjct: 2090 QQQQQQQQQQQQQQQQQQQQQQ 2111
Score = 37.7 bits (86), Expect = 0.068
Identities = 17/22 (77%), Positives = 20/22 (90%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
Q+++QQQQQQQQQQQQQ QQ Q
Sbjct: 2091 QQQQQQQQQQQQQQQQQQQQQQ 2112
Score = 37.7 bits (86), Expect = 0.068
Identities = 17/22 (77%), Positives = 20/22 (90%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
Q+++QQQQQQQQQQQQQ QQ Q
Sbjct: 2092 QQQQQQQQQQQQQQQQQQQQQQ 2113
Score = 37.7 bits (86), Expect = 0.068
Identities = 17/22 (77%), Positives = 20/22 (90%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
Q+++QQQQQQQQQQQQQ QQ Q
Sbjct: 2093 QQQQQQQQQQQQQQQQQQQQQQ 2114
Score = 37.7 bits (86), Expect = 0.068
Identities = 17/22 (77%), Positives = 20/22 (90%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
Q+++QQQQQQQQQQQQQ QQ Q
Sbjct: 2094 QQQQQQQQQQQQQQQQQQQQQQ 2115
Score = 37.4 bits (85), Expect = 0.089
Identities = 17/21 (80%), Positives = 19/21 (90%)
Query: 40 RRRQQQQQQQQQQQQQPQQPQ 60
R++QQQQQQQQQQQQQ QQ Q
Sbjct: 2089 RQQQQQQQQQQQQQQQQQQQQ 2109
Score = 37.4 bits (85), Expect = 0.089
Identities = 17/22 (77%), Positives = 20/22 (90%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
Q+++QQQQQQQQQQQQQ QQ Q
Sbjct: 2096 QQQQQQQQQQQQQQQQQQQQHQ 2117
Score = 37.4 bits (85), Expect = 0.089
Identities = 17/22 (77%), Positives = 20/22 (90%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
Q+++QQQQQQQQQQQQQ QQ Q
Sbjct: 2099 QQQQQQQQQQQQQQQQQHQQQQ 2120
Score = 36.6 bits (83), Expect = 0.15
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQMLSRGLHE 85
Q+++QQQQQQQQQQQ Q QQ Q + Q + P Q +GL +
Sbjct: 2101 QQQQQQQQQQQQQQQHQQQQQQQAAPPQPQPQSQP---QFQRQGLQQ 2144
Score = 36.2 bits (82), Expect = 0.20
Identities = 16/22 (72%), Positives = 20/22 (90%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
++++QQQQQQQQQQQQQ QQ Q
Sbjct: 2089 RQQQQQQQQQQQQQQQQQQQQQ 2110
Score = 35.8 bits (81), Expect = 0.26
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
Q+++QQQQQQQQQQQQQ Q Q
Sbjct: 2097 QQQQQQQQQQQQQQQQQQQHQQ 2118
Score = 35.8 bits (81), Expect = 0.26
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
Q+++QQQQQQQQQQQQQ Q Q
Sbjct: 2098 QQQQQQQQQQQQQQQQQQHQQQ 2119
Score = 35.8 bits (81), Expect = 0.26
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQ 60
Q+++QQQQQQQQQQQQ QQ Q
Sbjct: 2100 QQQQQQQQQQQQQQQQHQQQQQ 2121
Score = 34.7 bits (78), Expect = 0.58
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 43 QQQQQQQQQQQQQPQQPQVLSSEGGQLRH 71
+QQQQQQQQQQQQ QQ Q + Q H
Sbjct: 2050 EQQQQQQQQQQQQQQQQQQQQQQQQQQYH 2078
Score = 34.7 bits (78), Expect = 0.58
Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 39 QRRRQQ---QQQQQQQQQQQPQQPQVLSSEGGQLRH 71
Q+++QQ QQQQQQQQQQQ QQ Q + Q +H
Sbjct: 2081 QQQQQQILRQQQQQQQQQQQQQQQQQQQQQQQQQQH 2116
Score = 32.3 bits (72), Expect = 2.9
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQ 68
Q+++QQQQQQQQ +Q QQ Q+L + Q
Sbjct: 2065 QQQQQQQQQQQQYHIRQQQQQQILRQQQQQ 2094
Score = 32.0 bits (71), Expect = 3.8
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 44 QQQQQQQQQQQQPQQPQVLSSEGGQLRHN 72
+QQQQQQQQQQQ QQ Q + Q +++
Sbjct: 2050 EQQQQQQQQQQQQQQQQQQQQQQQQQQYH 2078
>gi|38158015 mastermind-like 3 [Homo sapiens]
Length = 1133
Score = 40.8 bits (94), Expect = 0.008
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 9 VAGATVGPGPVPAPGRWVSSSVPASDPSDGQR-------RRQQQQQQQQQQQQQPQQPQV 61
VAG+ GP VP+ + + QR ++QQQQQQQQQQQQQ QQ Q
Sbjct: 447 VAGSASGPVAVPSSDMSPAEQLKQMAAQQQQRAKLMQQKQQQQQQQQQQQQQQQQQQQQQ 506
Query: 62 LSSE 65
S++
Sbjct: 507 HSNQ 510
Score = 39.7 bits (91), Expect = 0.018
Identities = 17/23 (73%), Positives = 21/23 (91%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQV 61
Q+++QQQQQQQQQQQQQP PQ+
Sbjct: 630 QQQQQQQQQQQQQQQQQPPPPQL 652
Score = 37.4 bits (85), Expect = 0.089
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 31 PASDPSDGQRRRQQQQQQQQQQQQQPQQP 59
P +P ++QQQQQQQQQQQQQ QQP
Sbjct: 619 PNKNPLMPYIQQQQQQQQQQQQQQQQQQP 647
Score = 35.4 bits (80), Expect = 0.34
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQL 69
Q+++QQQQQQQQQQQQQ P L + L
Sbjct: 629 QQQQQQQQQQQQQQQQQQPPPPQLQAPRAHL 659
Score = 33.1 bits (74), Expect = 1.7
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 31 PASDPSDGQRRRQQQQQQQQQQQQQPQQPQ 60
P ++P+ QQQQQQQQQQQ QQ Q
Sbjct: 615 PVANPNKNPLMPYIQQQQQQQQQQQQQQQQ 644
Score = 31.2 bits (69), Expect = 6.4
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 39 QRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPLDIQMLSR 81
+ +RQQQQQQQQ +Q Q L + Q + NP +Q +++
Sbjct: 756 REQRQQQQQQQQILAEQQLQQSHLPRQHLQPQRNPYPVQQVNQ 798
>gi|116805330 small conductance calcium-activated potassium
channel protein 3 isoform a [Homo sapiens]
Length = 731
Score = 40.0 bits (92), Expect = 0.014
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 16 PGPVPAPGRWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQVLSSEGGQLRHNPL 74
P P AP + + S+ P Q QQQQQQQQQQQ QQP S+ QL+ P+
Sbjct: 45 PAPPAAPQQPLGPSLQPQPP-------QLQQQQQQQQQQQQQQPPHPLSQLAQLQSQPV 96
Score = 35.8 bits (81), Expect = 0.26
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 35 PSDGQRRRQQQQQQQQQQQQQPQQPQVLSSE-GGQLRHNPLDIQMLSRGLHEQ 86
PS G ++QQQQQQQQQQ P P G L+ P +Q + +Q
Sbjct: 24 PSSGDEQQQQQQQQQQQQPPPPAPPAAPQQPLGPSLQPQPPQLQQQQQQQQQQ 76
>gi|27886520 nuclear factor of activated T-cells 5 isoform a [Homo
sapiens]
Length = 1455
Score = 40.0 bits (92), Expect = 0.014
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 8 KVAGATVGPGPVPAPGRWV----SSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQVLS 63
+VA ++ P P+P + S+ A + + +QQQQQQQQQQQQQ QQ + S
Sbjct: 1136 QVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFS 1195
Query: 64 SE 65
++
Sbjct: 1196 NQ 1197
>gi|5729945 nuclear factor of activated T-cells 5 isoform c [Homo
sapiens]
Length = 1531
Score = 40.0 bits (92), Expect = 0.014
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 8 KVAGATVGPGPVPAPGRWV----SSSVPASDPSDGQRRRQQQQQQQQQQQQQPQQPQVLS 63
+VA ++ P P+P + S+ A + + +QQQQQQQQQQQQQ QQ + S
Sbjct: 1212 QVALGSLPPNPMPQSQQGTMFQSQHSIVAMQSNSPSQEQQQQQQQQQQQQQQQQQSILFS 1271
Query: 64 SE 65
++
Sbjct: 1272 NQ 1273
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,172,079
Number of Sequences: 37866
Number of extensions: 2739473
Number of successful extensions: 15635
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 11079
Number of HSP's gapped (non-prelim): 1949
length of query: 1239
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1125
effective length of database: 13,930,794
effective search space: 15672143250
effective search space used: 15672143250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.