Guide to the Human Genome
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Search of human proteins with 11321591

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|11321591 high-mobility group box 2 [Homo sapiens]
         (209 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|194688135 high-mobility group box 2 [Homo sapiens]                 436   e-123
gi|194688133 high-mobility group box 2 [Homo sapiens]                 436   e-123
gi|11321591 high-mobility group box 2 [Homo sapiens]                  436   e-123
gi|4504425 high-mobility group box 1 [Homo sapiens]                   362   e-100
gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]           341   2e-94
gi|71143137 high-mobility group box 3 [Homo sapiens]                  308   3e-84
gi|113421073 PREDICTED: similar to high mobility group box 3 [Ho...   275   2e-74
gi|113420668 PREDICTED: similar to high mobility group box 3 [Ho...   275   2e-74
gi|169184027 PREDICTED: similar to high mobility group box 3 [Ho...   275   2e-74
gi|169212060 PREDICTED: high mobility group protein B3-like prot...   273   8e-74
gi|239745831 PREDICTED: high mobility group protein B3-like prot...   273   8e-74
gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]            265   2e-71
gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]          262   1e-70
gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]          262   1e-70
gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo sap...   262   1e-70
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]          259   1e-69
gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]          259   1e-69
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]          257   4e-69
gi|169168462 PREDICTED: similar to high mobility group box 3 [Ho...   252   2e-67
gi|169168166 PREDICTED: similar to high mobility group box 3 [Ho...   252   2e-67
gi|113416897 PREDICTED: similar to high mobility group box 3 iso...   252   2e-67
gi|239742753 PREDICTED: similar to high mobility group box 3 iso...   195   2e-50
gi|57232750 HMG2 like isoform 1 [Homo sapiens]                        160   7e-40
gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]          154   4e-38
gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]          154   4e-38
gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]          129   1e-30
gi|4507241 structure specific recognition protein 1 [Homo sapiens]     93   2e-19
gi|57232748 HMG2 like isoform 2 [Homo sapiens]                         88   6e-18
gi|115529449 upstream binding transcription factor, RNA polymera...    79   4e-15
gi|115529451 upstream binding transcription factor, RNA polymera...    79   4e-15

>gi|194688135 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  436 bits (1122), Expect = e-123
 Identities = 209/209 (100%), Positives = 209/209 (100%)

Query: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
           MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF
Sbjct: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
           EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL
Sbjct: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120

Query: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180
           SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG
Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180

Query: 181 SKKKNEPEDEEEEEEEEDEDEEEEDEDEE 209
           SKKKNEPEDEEEEEEEEDEDEEEEDEDEE
Sbjct: 181 SKKKNEPEDEEEEEEEEDEDEEEEDEDEE 209


>gi|194688133 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  436 bits (1122), Expect = e-123
 Identities = 209/209 (100%), Positives = 209/209 (100%)

Query: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
           MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF
Sbjct: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
           EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL
Sbjct: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120

Query: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180
           SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG
Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180

Query: 181 SKKKNEPEDEEEEEEEEDEDEEEEDEDEE 209
           SKKKNEPEDEEEEEEEEDEDEEEEDEDEE
Sbjct: 181 SKKKNEPEDEEEEEEEEDEDEEEEDEDEE 209


>gi|11321591 high-mobility group box 2 [Homo sapiens]
          Length = 209

 Score =  436 bits (1122), Expect = e-123
 Identities = 209/209 (100%), Positives = 209/209 (100%)

Query: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
           MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF
Sbjct: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60

Query: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
           EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL
Sbjct: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120

Query: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180
           SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG
Sbjct: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180

Query: 181 SKKKNEPEDEEEEEEEEDEDEEEEDEDEE 209
           SKKKNEPEDEEEEEEEEDEDEEEEDEDEE
Sbjct: 181 SKKKNEPEDEEEEEEEEDEDEEEEDEDEE 209


>gi|4504425 high-mobility group box 1 [Homo sapiens]
          Length = 215

 Score =  362 bits (929), Expect = e-100
 Identities = 170/209 (81%), Positives = 189/209 (90%)

Query: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
           MGKGDP KPRGKMSSYAFFVQTCREEHKKKHPD+SVNF+EFSKKCSERWKTMSAKEK KF
Sbjct: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF 60

Query: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
           EDMAK+DKARY+REMK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+RPKIK EHPGL
Sbjct: 61  EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL 120

Query: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180
           SIGD AKKLGEMW+  +A DKQPYE+KAAKLKEKYEKDIAAYRAKGK +A KKG  +   
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK 180

Query: 181 SKKKNEPEDEEEEEEEEDEDEEEEDEDEE 209
           SKKK E E++EE+EE+E+E+E+EEDEDEE
Sbjct: 181 SKKKKEEEEDEEDEEDEEEEEDEEDEDEE 209


>gi|56806673 high-mobility group box 1-like 1 [Homo sapiens]
          Length = 211

 Score =  341 bits (875), Expect = 2e-94
 Identities = 159/209 (76%), Positives = 183/209 (87%)

Query: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
           MGKGDP KPRGKMSSYAFFVQTCREEHKKKH D+SVNF+EFS KCSERWKTMSAKEK KF
Sbjct: 1   MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHSDASVNFSEFSNKCSERWKTMSAKEKGKF 60

Query: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
           EDMAK+DK  Y+R+MK Y+PPKG+ K K KDPNAPKRPPSAFFLFCSE+ PKIK EHPGL
Sbjct: 61  EDMAKADKTHYERQMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGL 120

Query: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180
           SIGD AKKLGEMW+  +A DKQP E+KAAKLKEKYEKDIAAY+AKGK EA KKG  +   
Sbjct: 121 SIGDVAKKLGEMWNNTAADDKQPGEKKAAKLKEKYEKDIAAYQAKGKPEAAKKGVVKAEK 180

Query: 181 SKKKNEPEDEEEEEEEEDEDEEEEDEDEE 209
           SKKK E E++EE+EE+E+E++EE++ED++
Sbjct: 181 SKKKKEEEEDEEDEEDEEEEDEEDEEDDD 209


>gi|71143137 high-mobility group box 3 [Homo sapiens]
          Length = 200

 Score =  308 bits (788), Expect = 3e-84
 Identities = 150/205 (73%), Positives = 174/205 (84%), Gaps = 5/205 (2%)

Query: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
           M KGDP KP+GKMS+YAFFVQTCREEHKKK+P+  VNFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF 60

Query: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
           ++MAK+DK RYDREMK+Y P KG KK  KKDPNAPKRPPS FFLFCSE RPKIKS +PG+
Sbjct: 61  DEMAKADKVRYDREMKDYGPAKGGKK--KKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 118

Query: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180
           SIGD AKKLGEMW+  +  +KQPY  KAAKLKEKYEKD+A Y++KGK + G KGP +   
Sbjct: 119 SIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKYEKDVADYKSKGKFD-GAKGPAKV-- 175

Query: 181 SKKKNEPEDEEEEEEEEDEDEEEED 205
           ++KK E EDEEEEEEEE+E+EEE++
Sbjct: 176 ARKKVEEEDEEEEEEEEEEEEEEDE 200


>gi|113421073 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  275 bits (704), Expect = 2e-74
 Identities = 138/206 (66%), Positives = 163/206 (79%), Gaps = 6/206 (2%)

Query: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
           M KGDP KP+GKMS+YAF VQTC +EHKKK+P+  VNFAEFSKKCS RWKTMS+KEK KF
Sbjct: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
            +MAK+D+  YDREMK+Y P KG   GKKKDPNAPKRPPS FFLFCSE RPKIKS +PG+
Sbjct: 61  GEMAKADEVCYDREMKDYGPAKG---GKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 117

Query: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180
           SIGD AKKLGEMW+  +  +KQPY  KAAKLKEKYEKD+   + KGK   G K P +   
Sbjct: 118 SIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKF-YGAKRPAKV-- 174

Query: 181 SKKKNEPEDEEEEEEEEDEDEEEEDE 206
           ++KK E EDEE+EEEEE E +EE+++
Sbjct: 175 ARKKVEEEDEEDEEEEEKEKDEEDEQ 200


>gi|113420668 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  275 bits (704), Expect = 2e-74
 Identities = 138/206 (66%), Positives = 163/206 (79%), Gaps = 6/206 (2%)

Query: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
           M KGDP KP+GKMS+YAF VQTC +EHKKK+P+  VNFAEFSKKCS RWKTMS+KEK KF
Sbjct: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVPVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
            +MAK+D+  YDREMK+Y P KG   GKKKDPNAPKRPPS FFLFCSE RPKIKS +PG+
Sbjct: 61  GEMAKADEVCYDREMKDYGPAKG---GKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 117

Query: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180
           SIGD AKKLGEMW+  +  +KQPY  KAAKLKEKYEKD+   + KGK   G K P +   
Sbjct: 118 SIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKF-YGAKRPAKV-- 174

Query: 181 SKKKNEPEDEEEEEEEEDEDEEEEDE 206
           ++KK E EDEE+EEEEE E +EE+++
Sbjct: 175 ARKKVEEEDEEDEEEEEKEKDEEDEQ 200


>gi|169184027 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 208

 Score =  275 bits (703), Expect = 2e-74
 Identities = 138/206 (66%), Positives = 163/206 (79%), Gaps = 6/206 (2%)

Query: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
           M KGDP KP+GKMS+YAF VQTC +EHKKK+P+  VNFAEFSKKCS RWKTMS+KEK KF
Sbjct: 1   MAKGDPKKPQGKMSAYAFSVQTCCKEHKKKNPEVLVNFAEFSKKCSGRWKTMSSKEKFKF 60

Query: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
            +MAK+D+  YDREMK+Y P KG   GKKKDPNAPKRPPS FFLFCSE RPKIKS +PG+
Sbjct: 61  GEMAKADEVCYDREMKDYGPAKG---GKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGI 117

Query: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180
           SIGD AKKLGEMW+  +  +KQPY  KAAKLKEKYEKD+   + KGK   G K P +   
Sbjct: 118 SIGDVAKKLGEMWNNLNDSEKQPYVTKAAKLKEKYEKDVVDCKLKGKF-YGAKRPAKV-- 174

Query: 181 SKKKNEPEDEEEEEEEEDEDEEEEDE 206
           ++KK E EDEE+EEEEE E +EE+++
Sbjct: 175 ARKKVEEEDEEDEEEEEKEKDEEDEQ 200


>gi|169212060 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  273 bits (698), Expect = 8e-74
 Identities = 133/193 (68%), Positives = 156/193 (80%), Gaps = 6/193 (3%)

Query: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
           M KGDP KP+GKMS+YAFFVQTCREEHKKK+P   +NFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60

Query: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
            ++AK+DK  YD+E+K+Y P KG   GKKKDPNAPKRPPS FFLFCSE  PK KS +PG+
Sbjct: 61  NELAKADKVHYDQEIKDYGPAKG---GKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGI 117

Query: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180
            IGD AKKLGEMW   +  +KQPY  +AAKLKEKYEKD+A Y++KGKS+ G KGP +   
Sbjct: 118 PIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSD-GAKGPAKV-- 174

Query: 181 SKKKNEPEDEEEE 193
           ++KK E EDE+EE
Sbjct: 175 AQKKVEEEDEDEE 187


>gi|239745831 PREDICTED: high mobility group protein B3-like
           protein-like [Homo sapiens]
          Length = 207

 Score =  273 bits (698), Expect = 8e-74
 Identities = 133/193 (68%), Positives = 156/193 (80%), Gaps = 6/193 (3%)

Query: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
           M KGDP KP+GKMS+YAFFVQTCREEHKKK+P   +NFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYAFFVQTCREEHKKKNPKVPINFAEFSKKCSERWKTMSKKEKSKF 60

Query: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
            ++AK+DK  YD+E+K+Y P KG   GKKKDPNAPKRPPS FFLFCSE  PK KS +PG+
Sbjct: 61  NELAKADKVHYDQEIKDYGPAKG---GKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGI 117

Query: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180
            IGD AKKLGEMW   +  +KQPY  +AAKLKEKYEKD+A Y++KGKS+ G KGP +   
Sbjct: 118 PIGDVAKKLGEMWKNLNDSEKQPYITQAAKLKEKYEKDVAVYKSKGKSD-GAKGPAKV-- 174

Query: 181 SKKKNEPEDEEEE 193
           ++KK E EDE+EE
Sbjct: 175 AQKKVEEEDEDEE 187


>gi|19923236 nuclear antigen Sp100 isoform 2 [Homo sapiens]
          Length = 879

 Score =  265 bits (677), Expect = 2e-71
 Identities = 129/184 (70%), Positives = 149/184 (80%), Gaps = 3/184 (1%)

Query: 25  EEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKGD 84
           EEHKKK+PD+SV F+EF KKCSE WKT+ AKEK KFEDMAK+DKA Y+REMK Y+PPKG+
Sbjct: 699 EEHKKKNPDASVKFSEFLKKCSETWKTIFAKEKGKFEDMAKADKAHYEREMKTYIPPKGE 758

Query: 85  KKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPY 144
           KK K KDPNAPKRPP AFFLFCSE+RPKIK EHPGLSI D  KKL  MW+  +A DKQ Y
Sbjct: 759 KKKKFKDPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFY 818

Query: 145 EQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEEE 204
           E+KAAKLKEKY+KDIAAYRAKGK  + KK   +   SKKK E   EEE+EE+E E+E EE
Sbjct: 819 EKKAAKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEKSKKKKE---EEEDEEDEQEEENEE 875

Query: 205 DEDE 208
           D+D+
Sbjct: 876 DDDK 879



 Score = 40.0 bits (92), Expect = 0.001
 Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 2/92 (2%)

Query: 5   DPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMA 64
           DPN P+    ++  F    R + K +HP  S++  +  KK +  W   +A +K  +E  A
Sbjct: 765 DPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSID--DVVKKLAGMWNNTAAADKQFYEKKA 822

Query: 65  KSDKARYDREMKNYVPPKGDKKGKKKDPNAPK 96
              K +Y +++  Y         KK+   A K
Sbjct: 823 AKLKEKYKKDIAAYRAKGKPNSAKKRVVKAEK 854


>gi|169217198 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score =  262 bits (670), Expect = 1e-70
 Identities = 133/205 (64%), Positives = 159/205 (77%), Gaps = 5/205 (2%)

Query: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
           M +GD  KP+GKMS+YAFF QTCREEHKKK+P+  VNF EFSKKCSE+ KTMS KEK+KF
Sbjct: 1   MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
           ++MAK DK  YD+EMK+  P +G   GKKKDPNA KRP S FFLFCSE  PKIKS +PG+
Sbjct: 61  DEMAKVDKVHYDQEMKDNGPVEG---GKKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGI 117

Query: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180
           SIGD AKKLGEMW   S ++KQPY  KAA LKEKYEKD+A Y++KGK ++  KGP +   
Sbjct: 118 SIGDMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSA-KGPTKIAW 176

Query: 181 SK-KKNEPEDEEEEEEEEDEDEEEE 204
            K K+ + EDEEEEEEEE++ EE E
Sbjct: 177 KKVKEKDKEDEEEEEEEEEKKEEGE 201


>gi|169216377 PREDICTED: similar to hCG1644442 [Homo sapiens]
          Length = 201

 Score =  262 bits (670), Expect = 1e-70
 Identities = 133/205 (64%), Positives = 159/205 (77%), Gaps = 5/205 (2%)

Query: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
           M +GD  KP+GKMS+YAFF QTCREEHKKK+P+  VNF EFSKKCSE+ KTMS KEK+KF
Sbjct: 1   MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
           ++MAK DK  YD+EMK+  P +G   GKKKDPNA KRP S FFLFCSE  PKIKS +PG+
Sbjct: 61  DEMAKVDKVHYDQEMKDNGPVEG---GKKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGI 117

Query: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180
           SIGD AKKLGEMW   S ++KQPY  KAA LKEKYEKD+A Y++KGK ++  KGP +   
Sbjct: 118 SIGDMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSA-KGPTKIAW 176

Query: 181 SK-KKNEPEDEEEEEEEEDEDEEEE 204
            K K+ + EDEEEEEEEE++ EE E
Sbjct: 177 KKVKEKDKEDEEEEEEEEEKKEEGE 201


>gi|169216609 PREDICTED: hypothetical protein LOC203510 [Homo
           sapiens]
          Length = 201

 Score =  262 bits (670), Expect = 1e-70
 Identities = 133/205 (64%), Positives = 159/205 (77%), Gaps = 5/205 (2%)

Query: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
           M +GD  KP+GKMS+YAFF QTCREEHKKK+P+  VNF EFSKKCSE+ KTMS KEK+KF
Sbjct: 1   MAEGDHKKPKGKMSAYAFFAQTCREEHKKKNPEVPVNFVEFSKKCSEKRKTMSGKEKTKF 60

Query: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
           ++MAK DK  YD+EMK+  P +G   GKKKDPNA KRP S FFLFCSE  PKIKS +PG+
Sbjct: 61  DEMAKVDKVHYDQEMKDNGPVEG---GKKKDPNALKRPLSGFFLFCSEFHPKIKSTNPGI 117

Query: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180
           SIGD AKKLGEMW   S ++KQPY  KAA LKEKYEKD+A Y++KGK ++  KGP +   
Sbjct: 118 SIGDMAKKLGEMWINYSDREKQPYITKAADLKEKYEKDVADYKSKGKFDSA-KGPTKIAW 176

Query: 181 SK-KKNEPEDEEEEEEEEDEDEEEE 204
            K K+ + EDEEEEEEEE++ EE E
Sbjct: 177 KKVKEKDKEDEEEEEEEEEKKEEGE 201


>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 488

 Score =  259 bits (662), Expect = 1e-69
 Identities = 126/182 (69%), Positives = 146/182 (80%), Gaps = 7/182 (3%)

Query: 35  SVNFAEFSKKCSERWKTMSAKEKSKF-------EDMAKSDKARYDREMKNYVPPKGDKKG 87
           SVNF+EFSKKCSERWK MSAKEK KF       EDMAK+DKA Y REMK Y+PPKG+ K 
Sbjct: 164 SVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKK 223

Query: 88  KKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQK 147
           K KDPNAPKRPPSAFFL+ SE+ PKIK E PGLS GD AKKLGEMW+  +A DKQPYE++
Sbjct: 224 KFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKR 283

Query: 148 AAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEEEDED 207
           +AKLKEKYEKDIAAYRAKGK +A   G  +   SKKK E E+ EE+EE+E+E+++EEDED
Sbjct: 284 SAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDED 343

Query: 208 EE 209
           EE
Sbjct: 344 EE 345



 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 46/205 (22%), Positives = 77/205 (37%), Gaps = 79/205 (38%)

Query: 5   DPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMA 64
           DPN P+   S  AFF+       K K     ++F + +KK  E W   +A +K  +E  +
Sbjct: 227 DPNAPKRPPS--AFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRS 284

Query: 65  KSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGD 124
              K +Y++++  Y                                 + K +H   + G 
Sbjct: 285 AKLKEKYEKDIAAY---------------------------------RAKGKHDAANNGV 311

Query: 125 TAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKK 184
                                 KAAK K+K E++                       + +
Sbjct: 312 V---------------------KAAKSKKKKEEE-----------------------ENE 327

Query: 185 NEPEDEEEEEEEEDEDEEEEDEDEE 209
            + EDEEEE++EEDEDEE+++++EE
Sbjct: 328 EDEEDEEEEKDEEDEDEEDDEDEEE 352


>gi|239749996 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 487

 Score =  259 bits (662), Expect = 1e-69
 Identities = 126/182 (69%), Positives = 146/182 (80%), Gaps = 7/182 (3%)

Query: 35  SVNFAEFSKKCSERWKTMSAKEKSKF-------EDMAKSDKARYDREMKNYVPPKGDKKG 87
           SVNF+EFSKKCSERWK MSAKEK KF       EDMAK+DKA Y REMK Y+PPKG+ K 
Sbjct: 164 SVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKK 223

Query: 88  KKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQK 147
           K KDPNAPKRPPSAFFL+ SE+ PKIK E PGLS GD AKKLGEMW+  +A DKQPYE++
Sbjct: 224 KFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKR 283

Query: 148 AAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEEEDED 207
           +AKLKEKYEKDIAAYRAKGK +A   G  +   SKKK E E+ EE+EE+E+E+++EEDED
Sbjct: 284 SAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEEDED 343

Query: 208 EE 209
           EE
Sbjct: 344 EE 345



 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 49/205 (23%), Positives = 76/205 (37%), Gaps = 80/205 (39%)

Query: 5   DPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMA 64
           DPN P+   S  AFF+       K K     ++F + +KK  E W   +A +K  +E  +
Sbjct: 227 DPNAPKRPPS--AFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRS 284

Query: 65  KSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGD 124
              K +Y++++  Y                                 + K +H   + G 
Sbjct: 285 AKLKEKYEKDIAAY---------------------------------RAKGKHDAANNGV 311

Query: 125 TAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKK 184
                                 KAAK K+K E++                       + +
Sbjct: 312 V---------------------KAAKSKKKKEEE-----------------------ENE 327

Query: 185 NEPEDEEEEEEEEDEDEEEEDEDEE 209
            + EDEEEE++EEDED EE+DEDEE
Sbjct: 328 EDEEDEEEEKDEEDED-EEDDEDEE 351


>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
          Length = 486

 Score =  257 bits (657), Expect = 4e-69
 Identities = 128/186 (68%), Positives = 147/186 (79%), Gaps = 11/186 (5%)

Query: 35  SVNFAEFSKKCSERWKTMSAKEKSKF-------EDMAKSDKARYDREMKNYVPPKGDKKG 87
           SVNF+EFSKKCSERWK MSAKEK KF       EDMAK+DKA Y REMK Y+PPKG+ K 
Sbjct: 164 SVNFSEFSKKCSERWKNMSAKEKGKFGRARGKFEDMAKADKAHYKREMKTYIPPKGETKK 223

Query: 88  KKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQK 147
           K KDPNAPKRPPSAFFL+ SE+ PKIK E PGLS GD AKKLGEMW+  +A DKQPYE++
Sbjct: 224 KFKDPNAPKRPPSAFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKR 283

Query: 148 AAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNE----PEDEEEEEEEEDEDEEE 203
           +AKLKEKYEKDIAAYRAKGK +A   G  +   SKKK E     EDEE+EEEE+DEDE+E
Sbjct: 284 SAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEDEDE 343

Query: 204 EDEDEE 209
           ED+++E
Sbjct: 344 EDDEDE 349



 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 48/205 (23%), Positives = 75/205 (36%), Gaps = 81/205 (39%)

Query: 5   DPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMA 64
           DPN P+   S  AFF+       K K     ++F + +KK  E W   +A +K  +E  +
Sbjct: 227 DPNAPKRPPS--AFFLYFSEYGPKIKGERPGLSFGDVAKKLGEMWNNTAADDKQPYEKRS 284

Query: 65  KSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGD 124
              K +Y++++  Y                                 + K +H   + G 
Sbjct: 285 AKLKEKYEKDIAAY---------------------------------RAKGKHDAANNGV 311

Query: 125 TAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKK 184
                                 KAAK K+K E++                        + 
Sbjct: 312 V---------------------KAAKSKKKKEEE------------------------EN 326

Query: 185 NEPEDEEEEEEEEDEDEEEEDEDEE 209
            E E++EEEE++EDED EE+DEDEE
Sbjct: 327 EEDEEDEEEEKDEDED-EEDDEDEE 350


>gi|169168462 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  252 bits (643), Expect = 2e-67
 Identities = 130/192 (67%), Positives = 148/192 (77%), Gaps = 8/192 (4%)

Query: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
           M KGDP KP+GKMS+Y FFVQTCREE KKK+P   VNFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57

Query: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
           ++MAK+DK   DREMK   P KG KK  KKDP+APKRPPS FFLF SE RPKIKS +PG+
Sbjct: 58  DEMAKTDKVHCDREMKG--PAKGGKK--KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGI 113

Query: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180
           SIGD AKKLGEMW+  +  +KQPY  K AKLKEKYEKD+A  ++KGK + G K P +   
Sbjct: 114 SIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFD-GSKRPAKVAW 172

Query: 181 SKKKNEPEDEEE 192
            K + E EDEEE
Sbjct: 173 KKVEEEDEDEEE 184


>gi|169168166 PREDICTED: similar to high mobility group box 3 [Homo
           sapiens]
          Length = 204

 Score =  252 bits (643), Expect = 2e-67
 Identities = 130/192 (67%), Positives = 148/192 (77%), Gaps = 8/192 (4%)

Query: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
           M KGDP KP+GKMS+Y FFVQTCREE KKK+P   VNFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57

Query: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
           ++MAK+DK   DREMK   P KG KK  KKDP+APKRPPS FFLF SE RPKIKS +PG+
Sbjct: 58  DEMAKTDKVHCDREMKG--PAKGGKK--KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGI 113

Query: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180
           SIGD AKKLGEMW+  +  +KQPY  K AKLKEKYEKD+A  ++KGK + G K P +   
Sbjct: 114 SIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFD-GSKRPAKVAW 172

Query: 181 SKKKNEPEDEEE 192
            K + E EDEEE
Sbjct: 173 KKVEEEDEDEEE 184


>gi|113416897 PREDICTED: similar to high mobility group box 3
           isoform 1 [Homo sapiens]
          Length = 201

 Score =  252 bits (643), Expect = 2e-67
 Identities = 130/192 (67%), Positives = 148/192 (77%), Gaps = 8/192 (4%)

Query: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
           M KGDP KP+GKMS+Y FFVQTCREE KKK+P   VNFAEFSKKCSERWKTMS KEKSKF
Sbjct: 1   MAKGDPKKPKGKMSAYVFFVQTCREECKKKNP---VNFAEFSKKCSERWKTMSGKEKSKF 57

Query: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
           ++MAK+DK   DREMK   P KG KK  KKDP+APKRPPS FFLF SE RPKIKS +PG+
Sbjct: 58  DEMAKTDKVHCDREMKG--PAKGGKK--KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGI 113

Query: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTG 180
           SIGD AKKLGEMW+  +  +KQPY  K AKLKEKYEKD+A  ++KGK + G K P +   
Sbjct: 114 SIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDVADSKSKGKFD-GSKRPAKVAW 172

Query: 181 SKKKNEPEDEEE 192
            K + E EDEEE
Sbjct: 173 KKVEEEDEDEEE 184


>gi|239742753 PREDICTED: similar to high mobility group box 3
           isoform 2 [Homo sapiens]
          Length = 183

 Score =  195 bits (496), Expect = 2e-50
 Identities = 101/153 (66%), Positives = 116/153 (75%), Gaps = 5/153 (3%)

Query: 40  EFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPP 99
           EFSKKCSERWKTMS KEKSKF++MAK+DK   DREMK   P KG KK  KKDP+APKRPP
Sbjct: 19  EFSKKCSERWKTMSGKEKSKFDEMAKTDKVHCDREMKG--PAKGGKK--KKDPSAPKRPP 74

Query: 100 SAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDI 159
           S FFLF SE RPKIKS +PG+SIGD AKKLGEMW+  +  +KQPY  K AKLKEKYEKD+
Sbjct: 75  SGFFLFSSEIRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKTAKLKEKYEKDV 134

Query: 160 AAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEE 192
           A  ++KGK + G K P +    K + E EDEEE
Sbjct: 135 ADSKSKGKFD-GSKRPAKVAWKKVEEEDEDEEE 166



 Score = 37.0 bits (84), Expect = 0.012
 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 3/88 (3%)

Query: 3   KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
           K DP+ P+   S +  F    R + K  +P  S+   + +KK  E W  ++  EK  +  
Sbjct: 64  KKDPSAPKRPPSGFFLFSSEIRPKIKSTNPGISIG--DVAKKLGEMWNNLNDSEKQPYIT 121

Query: 63  MAKSDKARYDREMKNYVPPKGDKKGKKK 90
                K +Y++++ +    KG   G K+
Sbjct: 122 KTAKLKEKYEKDVAD-SKSKGKFDGSKR 148


>gi|57232750 HMG2 like isoform 1 [Homo sapiens]
          Length = 186

 Score =  160 bits (405), Expect = 7e-40
 Identities = 75/163 (46%), Positives = 109/163 (66%), Gaps = 2/163 (1%)

Query: 1   MGKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF 60
           MGK    KP+  +SSY  F+   R + K++ P++ V F EFS+KCSE+W+++S  EK+K+
Sbjct: 1   MGKEIQLKPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKY 60

Query: 61  EDMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL 120
           E +AK DKARY  EM NYV  +  KK +K+DP  P+RPPS+F LFC +H  ++K E+P  
Sbjct: 61  EALAKLDKARYQEEMMNYVGKR--KKRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNW 118

Query: 121 SIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
           S+   AK  G+MWS  +  +K PYEQ+ A L+ KY +++  YR
Sbjct: 119 SVVQVAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYR 161



 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 3/86 (3%)

Query: 95  PKRPPSAFFLFCSEHRPKIKSEHPGLSIG--DTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
           PK   S++  F   +R K K + P   +G  + ++K  E W   S  +K  YE  A   K
Sbjct: 9   PKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKYEALAKLDK 68

Query: 153 EKYEKDIAAYRAKGKSEAGKKGPGRP 178
            +Y++++  Y  K K    K+ P  P
Sbjct: 69  ARYQEEMMNYVGKRKKRR-KRDPQEP 93


>gi|239752318 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  154 bits (390), Expect = 4e-38
 Identities = 78/124 (62%), Positives = 90/124 (72%), Gaps = 1/124 (0%)

Query: 65  KSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGD 124
           K D A Y+REMK Y+PPK + K K +DPNAPK PP AFF+F SE  PKIK EHPGLSI D
Sbjct: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISD 92

Query: 125 TAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKK 184
            AKKLGEMW+  +  DK PYE+KA KLKEKYEKDIAA+  KGK +A KKG  +    KKK
Sbjct: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152

Query: 185 NEPE 188
            E +
Sbjct: 153 KEED 156



 Score = 38.5 bits (88), Expect = 0.004
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 5   DPNKPRGKMSSYAFFVQTCREEHK-KKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDM 63
           DPN P  K    AFF+ +  +  K K+HP  S++  + +KK  E W  ++  +K  +E  
Sbjct: 60  DPNAP--KSPPLAFFMFSSEDCPKIKEHPGLSIS--DVAKKLGEMWNYIAEDDKHPYEKK 115

Query: 64  AKSDKARYDREMKNY---VPPKGDKKGKKKDPNAPKR 97
           A   K +Y++++  +     P   KKG  K     K+
Sbjct: 116 AVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152


>gi|239746826 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 214

 Score =  154 bits (390), Expect = 4e-38
 Identities = 78/124 (62%), Positives = 90/124 (72%), Gaps = 1/124 (0%)

Query: 65  KSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGD 124
           K D A Y+REMK Y+PPK + K K +DPNAPK PP AFF+F SE  PKIK EHPGLSI D
Sbjct: 34  KVDMAHYEREMKIYIPPKAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISD 92

Query: 125 TAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKK 184
            AKKLGEMW+  +  DK PYE+KA KLKEKYEKDIAA+  KGK +A KKG  +    KKK
Sbjct: 93  VAKKLGEMWNYIAEDDKHPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152

Query: 185 NEPE 188
            E +
Sbjct: 153 KEED 156



 Score = 38.5 bits (88), Expect = 0.004
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 5   DPNKPRGKMSSYAFFVQTCREEHK-KKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDM 63
           DPN P  K    AFF+ +  +  K K+HP  S++  + +KK  E W  ++  +K  +E  
Sbjct: 60  DPNAP--KSPPLAFFMFSSEDCPKIKEHPGLSIS--DVAKKLGEMWNYIAEDDKHPYEKK 115

Query: 64  AKSDKARYDREMKNY---VPPKGDKKGKKKDPNAPKR 97
           A   K +Y++++  +     P   KKG  K     K+
Sbjct: 116 AVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 152


>gi|239757817 PREDICTED: similar to hCG1647425 [Homo sapiens]
          Length = 227

 Score =  129 bits (325), Expect = 1e-30
 Identities = 66/107 (61%), Positives = 77/107 (71%), Gaps = 1/107 (0%)

Query: 82  KGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDK 141
           + + K K +DPNAPK PP AFF+F SE  PKIK EHPGLSI D AKKLGEMW+  +  DK
Sbjct: 78  RAETKMKFEDPNAPKSPPLAFFMFSSEDCPKIK-EHPGLSISDVAKKLGEMWNYIAEDDK 136

Query: 142 QPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPE 188
            PYE+KA KLKEKYEKDIAA+  KGK +A KKG  +    KKK E +
Sbjct: 137 HPYEKKAVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKKKEED 183



 Score = 38.5 bits (88), Expect = 0.004
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 5   DPNKPRGKMSSYAFFVQTCREEHK-KKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDM 63
           DPN P  K    AFF+ +  +  K K+HP  S++  + +KK  E W  ++  +K  +E  
Sbjct: 87  DPNAP--KSPPLAFFMFSSEDCPKIKEHPGLSIS--DVAKKLGEMWNYIAEDDKHPYEKK 142

Query: 64  AKSDKARYDREMKNY---VPPKGDKKGKKKDPNAPKR 97
           A   K +Y++++  +     P   KKG  K     K+
Sbjct: 143 AVKLKEKYEKDIAAFGGKGKPDAAKKGAIKAEKCKKK 179


>gi|4507241 structure specific recognition protein 1 [Homo sapiens]
          Length = 709

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 59/170 (34%), Positives = 92/170 (54%), Gaps = 16/170 (9%)

Query: 33  DSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSD--------KARYDREMKNYVPPKGD 84
           D S N  E  +  +E + + ++   S  E  +  D        KA+  ++ K+   P   
Sbjct: 479 DESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPVEV 538

Query: 85  KKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPY 144
           KKGK  DPNAPKRP SA+ L+ +  R KIKS+HPG+SI D +KK GE+W   S + K+ +
Sbjct: 539 KKGK--DPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEW 596

Query: 145 EQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEE 194
           ++KA   +  YEK +  Y   G+ E+ K+       SKKK + + + E++
Sbjct: 597 DRKAEDARRDYEKAMKEYEG-GRGESSKRDK-----SKKKKKVKVKMEKK 640



 Score = 65.1 bits (157), Expect = 4e-11
 Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 42/191 (21%)

Query: 5   DPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMA 64
           DPN P+  MS+Y  ++   RE+ K  HP  S+   + SKK  E WK MS ++K +++  A
Sbjct: 543 DPNAPKRPMSAYMLWLNASREKIKSDHPGISIT--DLSKKAGEIWKGMSKEKKEEWDRKA 600

Query: 65  KSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGL-SIG 123
           +  +  Y++ MK Y   +G+    K+D +  K+            + K+K E     S G
Sbjct: 601 EDARRDYEKAMKEYEGGRGE--SSKRDKSKKKK------------KVKVKMEKKSTPSRG 646

Query: 124 DTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKK 183
            ++K      SE                         ++++K    + +   G     KK
Sbjct: 647 SSSKSSSRQLSE-------------------------SFKSKEFVSSDESSSGENKSKKK 681

Query: 184 KNEPEDEEEEE 194
           +   ED EEEE
Sbjct: 682 RRRSEDSEEEE 692


>gi|57232748 HMG2 like isoform 2 [Homo sapiens]
          Length = 112

 Score = 87.8 bits (216), Expect = 6e-18
 Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 2/89 (2%)

Query: 75  MKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWS 134
           M NYV  +  KK +K+DP  P+RPPS+F LFC +H  ++K E+P  S+   AK  G+MWS
Sbjct: 1   MMNYVGKR--KKRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSVVQVAKATGKMWS 58

Query: 135 EQSAKDKQPYEQKAAKLKEKYEKDIAAYR 163
             +  +K PYEQ+ A L+ KY +++  YR
Sbjct: 59  TATDLEKHPYEQRVALLRAKYFEELELYR 87



 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 3  KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFED 62
          K DP +PR   SS+  F Q    + K+++P+ SV   + +K   + W T +  EK  +E 
Sbjct: 13 KRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSV--VQVAKATGKMWSTATDLEKHPYEQ 70

Query: 63 MAKSDKARYDREMKNY 78
               +A+Y  E++ Y
Sbjct: 71 RVALLRAKYFEELELY 86


>gi|115529449 upstream binding transcription factor, RNA polymerase
           I isoform b [Homo sapiens]
          Length = 727

 Score = 78.6 bits (192), Expect = 4e-15
 Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 22/180 (12%)

Query: 49  WKTMSAKEKSKFEDMAKSDKARYDREMKNY-VPPKGDKKGKK-KDPNAPKRPP-SAFFLF 105
           W  M  KEK  +   A  D+ RY+RE+     PP      KK K    PK+PP + +  F
Sbjct: 482 WNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKF 541

Query: 106 CSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYE--------- 156
             E     +  H  L + +   ++G  W   S   K+ Y++ A + +++Y+         
Sbjct: 542 SQELLSNGELNH--LPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKS 599

Query: 157 ---KDIAAYRA----KGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEEEDEDEE 209
              +D AAY+     K KS    +GP  P  S+   + + E EE++EEDED+E+EDE+EE
Sbjct: 600 LSPQDRAAYKEYISNKRKSMTKLRGPN-PKSSRTTLQSKSESEEDDEEDEDDEDEDEEEE 658



 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 34/163 (20%)

Query: 45  CSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYV------------------------- 79
           CS++WK +S KEK  +       K  Y+ E+  ++                         
Sbjct: 291 CSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQA 350

Query: 80  ----PPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSE 135
                 K  ++G K     PKRP SA F+F  E R +++ E P LS  +  + L  MW++
Sbjct: 351 TSPASKKPAQEGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWND 410

Query: 136 QSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRP 178
            S K K  Y+ + A LK + E+     +  G+ E   K P  P
Sbjct: 411 LSEKKKAKYKAREAALKAQSER-----KPGGEREERGKLPESP 448



 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 46/195 (23%), Positives = 94/195 (48%), Gaps = 28/195 (14%)

Query: 2   GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
           GKG   KP+  +S+   F +  R + +++ P+ S +  E ++  +  W  +S K+K+K++
Sbjct: 363 GKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSES--ELTRLLARMWNDLSEKKKAKYK 420

Query: 62  DMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 121
               + KA+ +R+      P G+++ + K P +PKR    +       +  +  ++    
Sbjct: 421 AREAALKAQSERK------PGGEREERGKLPESPKRAEEIW-------QQSVIGDYLARF 467

Query: 122 IGDTAKKLGEM---WSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRP 178
             D  K L  M   W+    K+K  + +KAA+ +++YE++++  RA          P   
Sbjct: 468 KNDRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRA----------PPAA 517

Query: 179 TGSKKKNEPEDEEEE 193
           T S KK + + E ++
Sbjct: 518 TNSSKKMKFQGEPKK 532



 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 16/169 (9%)

Query: 29  KKHPD-SSVNFAEFS-KKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKGDKK 86
           + H D   V F +FS   C  +W  +S  E  KF  + +      +  +KN  P KG K 
Sbjct: 50  ESHMDWEKVAFKDFSGDMCKLKWVEIS-NEVRKFRTLTELILDAQEH-VKN--PYKGKKL 105

Query: 87  GKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQ 146
             KK P+ PK+P + +F F  E R K    HP +S  D  K L + + E   K K  Y Q
Sbjct: 106 --KKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQ 163

Query: 147 KAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEE 195
              + K+++E+++A +R        +  P     +KK + PE  +  ++
Sbjct: 164 DFQREKQEFERNLARFR--------EDHPDLIQNAKKSDIPEKPKTPQQ 204



 Score = 38.9 bits (89), Expect = 0.003
 Identities = 60/302 (19%), Positives = 106/302 (35%), Gaps = 104/302 (34%)

Query: 3   KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF-- 60
           K  P+ P+  ++ Y  F    R ++ K HP+ S    + +K  S+++K +  K+K K+  
Sbjct: 106 KKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSN--LDLTKILSKKYKELPEKKKMKYIQ 163

Query: 61  ------------------------EDMAKSD---------------------KARYDREM 75
                                   ++  KSD                     K R D  M
Sbjct: 164 DFQREKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDEIM 223

Query: 76  KNYVPP-----------------KGDKKGKKKDPNAP-KRPPSAFFLFCSEHRPKIKSEH 117
           ++Y+                   K +++ K K    P K PP+++ L+C+E    +K   
Sbjct: 224 RDYIQKHPELNISEEGITKSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMK--- 280

Query: 118 PGLSIGDTAKKL--GEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAY------------- 162
               +  T + +   + W   S K+K  Y +K  + K+ YE ++  +             
Sbjct: 281 ---DVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVL 337

Query: 163 ---------RAKGKSEAGKK--GPGRPTGSKKKNEPED-----EEEEEEEEDEDEEEEDE 206
                    + +  S A KK    G   GS+K   P        EE+  +  E+  E  E
Sbjct: 338 GEEKMLNINKKQATSPASKKPAQEGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSE 397

Query: 207 DE 208
            E
Sbjct: 398 SE 399


>gi|115529451 upstream binding transcription factor, RNA polymerase
           I isoform b [Homo sapiens]
          Length = 727

 Score = 78.6 bits (192), Expect = 4e-15
 Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 22/180 (12%)

Query: 49  WKTMSAKEKSKFEDMAKSDKARYDREMKNY-VPPKGDKKGKK-KDPNAPKRPP-SAFFLF 105
           W  M  KEK  +   A  D+ RY+RE+     PP      KK K    PK+PP + +  F
Sbjct: 482 WNNMEKKEKLMWIKKAAEDQKRYERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKF 541

Query: 106 CSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYE--------- 156
             E     +  H  L + +   ++G  W   S   K+ Y++ A + +++Y+         
Sbjct: 542 SQELLSNGELNH--LPLKERMVEIGSRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWVKS 599

Query: 157 ---KDIAAYRA----KGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEEEDEDEE 209
              +D AAY+     K KS    +GP  P  S+   + + E EE++EEDED+E+EDE+EE
Sbjct: 600 LSPQDRAAYKEYISNKRKSMTKLRGPN-PKSSRTTLQSKSESEEDDEEDEDDEDEDEEEE 658



 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 34/163 (20%)

Query: 45  CSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYV------------------------- 79
           CS++WK +S KEK  +       K  Y+ E+  ++                         
Sbjct: 291 CSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNINKKQA 350

Query: 80  ----PPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSE 135
                 K  ++G K     PKRP SA F+F  E R +++ E P LS  +  + L  MW++
Sbjct: 351 TSPASKKPAQEGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWND 410

Query: 136 QSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRP 178
            S K K  Y+ + A LK + E+     +  G+ E   K P  P
Sbjct: 411 LSEKKKAKYKAREAALKAQSER-----KPGGEREERGKLPESP 448



 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 46/195 (23%), Positives = 94/195 (48%), Gaps = 28/195 (14%)

Query: 2   GKGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFE 61
           GKG   KP+  +S+   F +  R + +++ P+ S +  E ++  +  W  +S K+K+K++
Sbjct: 363 GKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSES--ELTRLLARMWNDLSEKKKAKYK 420

Query: 62  DMAKSDKARYDREMKNYVPPKGDKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLS 121
               + KA+ +R+      P G+++ + K P +PKR    +       +  +  ++    
Sbjct: 421 AREAALKAQSERK------PGGEREERGKLPESPKRAEEIW-------QQSVIGDYLARF 467

Query: 122 IGDTAKKLGEM---WSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRP 178
             D  K L  M   W+    K+K  + +KAA+ +++YE++++  RA          P   
Sbjct: 468 KNDRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKRYERELSEMRA----------PPAA 517

Query: 179 TGSKKKNEPEDEEEE 193
           T S KK + + E ++
Sbjct: 518 TNSSKKMKFQGEPKK 532



 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 16/169 (9%)

Query: 29  KKHPD-SSVNFAEFS-KKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKGDKK 86
           + H D   V F +FS   C  +W  +S  E  KF  + +      +  +KN  P KG K 
Sbjct: 50  ESHMDWEKVAFKDFSGDMCKLKWVEIS-NEVRKFRTLTELILDAQEH-VKN--PYKGKKL 105

Query: 87  GKKKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQ 146
             KK P+ PK+P + +F F  E R K    HP +S  D  K L + + E   K K  Y Q
Sbjct: 106 --KKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQ 163

Query: 147 KAAKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEE 195
              + K+++E+++A +R        +  P     +KK + PE  +  ++
Sbjct: 164 DFQREKQEFERNLARFR--------EDHPDLIQNAKKSDIPEKPKTPQQ 204



 Score = 38.9 bits (89), Expect = 0.003
 Identities = 60/302 (19%), Positives = 106/302 (35%), Gaps = 104/302 (34%)

Query: 3   KGDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKF-- 60
           K  P+ P+  ++ Y  F    R ++ K HP+ S    + +K  S+++K +  K+K K+  
Sbjct: 106 KKHPDFPKKPLTPYFRFFMEKRAKYAKLHPEMSN--LDLTKILSKKYKELPEKKKMKYIQ 163

Query: 61  ------------------------EDMAKSD---------------------KARYDREM 75
                                   ++  KSD                     K R D  M
Sbjct: 164 DFQREKQEFERNLARFREDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDEIM 223

Query: 76  KNYVPP-----------------KGDKKGKKKDPNAP-KRPPSAFFLFCSEHRPKIKSEH 117
           ++Y+                   K +++ K K    P K PP+++ L+C+E    +K   
Sbjct: 224 RDYIQKHPELNISEEGITKSTLTKAERQLKDKFDGRPTKPPPNSYSLYCAELMANMK--- 280

Query: 118 PGLSIGDTAKKL--GEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAY------------- 162
               +  T + +   + W   S K+K  Y +K  + K+ YE ++  +             
Sbjct: 281 ---DVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVL 337

Query: 163 ---------RAKGKSEAGKK--GPGRPTGSKKKNEPED-----EEEEEEEEDEDEEEEDE 206
                    + +  S A KK    G   GS+K   P        EE+  +  E+  E  E
Sbjct: 338 GEEKMLNINKKQATSPASKKPAQEGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSE 397

Query: 207 DE 208
            E
Sbjct: 398 SE 399


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.303    0.125    0.355 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,650,036
Number of Sequences: 37866
Number of extensions: 585861
Number of successful extensions: 30581
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 311
Number of HSP's that attempted gapping in prelim test: 6718
Number of HSP's gapped (non-prelim): 9924
length of query: 209
length of database: 18,247,518
effective HSP length: 98
effective length of query: 111
effective length of database: 14,536,650
effective search space: 1613568150
effective search space used: 1613568150
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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