Guide to the Human Genome
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Name: ACACA Sequence: fasta or formatted (2346aa) NCBI GI: 38679977
Description:

acetyl-Coenzyme A carboxylase alpha isoform 2

Referenced in:

Fatty Acid Synthesis

Other entries for this name:
alt prot [2383aa] acetyl-Coenzyme A carboxylase alpha isoform 1
alt mRNA [2346aa] acetyl-Coenzyme A carboxylase alpha isoform 2
alt prot [2288aa] acetyl-Coenzyme A carboxylase alpha isoform 3
alt prot [2268aa] acetyl-Coenzyme A carboxylase alpha isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2        146           3
 C cysteine            1.3         30           2
 D aspartate           5.5        128           2
 E glutamate           7.0        164           2
 F phenylalanine       4.1         96           2
 G glycine             6.1        143           4
 H histidine           2.7         63           1
 I isoleucine          6.2        145           2
 K lysine              4.6        108           3
 L leucine             9.3        218           3
 M methionine          3.2         75           2
 N asparagine          4.5        105           4
 P proline             4.8        113           2
 Q glutamine           4.4        103           2
 R arginine            6.2        145           2
 S serine              6.8        160           2
 T threonine           4.6        109           2
 V valine              8.0        188           3
 W tryptophan          1.2         27           1
 Y tyrosine            3.4         80           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acetyl-Coenzyme A carboxylase alpha isoform 2 
ACACA                 1.000   acetyl-Coenzyme A carboxylase alpha isoform 2 
ACACA                 1.000   acetyl-Coenzyme A carboxylase alpha isoform 1 
ACACA                 0.970   acetyl-Coenzyme A carboxylase alpha isoform 3 
ACACA                 0.969   acetyl-Coenzyme A carboxylase alpha isoform 4 
ACACB                 0.751   acetyl-Coenzyme A carboxylase beta 
PCCA                  0.048   propionyl-Coenzyme A carboxylase, alpha polypeptide ...
PCCA                  0.048   propionyl-Coenzyme A carboxylase, alpha polypeptide...
MCCC1                 0.045   methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) pr...
PC                    0.042   pyruvate carboxylase precursor 
PC                    0.042   pyruvate carboxylase precursor 
PC                    0.042   pyruvate carboxylase precursor 
PCCB                  0.011   propionyl Coenzyme A carboxylase, beta polypeptide ...
CAD                   0.009   carbamoylphosphate synthetase 2/aspartate transcarba...
CPS1                  0.009   carbamoyl-phosphate synthetase 1 isoform c 
CPS1                  0.009   carbamoyl-phosphate synthetase 1 isoform a precurso...
CPS1                  0.009   carbamoyl-phosphate synthetase 1 isoform b precursor...
MCCC2                 0.004   methylcrotonoyl-Coenzyme A carboxylase 2 (beta) [Hom...
RIMKLA                0.004   ribosomal modification protein rimK-like family mem...
TLR3                  0.002   toll-like receptor 3 
RIMKLB                0.002   ribosomal modification protein rimK-like family mem...
CTR9                  0.002   SH2 domain binding protein 1 
PDHX                  0.002   pyruvate dehydrogenase complex, component X isoform...
PDHX                  0.002   pyruvate dehydrogenase complex, component X isoform...
NFYA                  0.002   nuclear transcription factor Y, alpha isoform 2 [Hom...
NFYA                  0.002   nuclear transcription factor Y, alpha isoform 1 [Homo...
DHRS12                0.002   dehydrogenase/reductase (SDR family) member 12 isofo...
UBAP1                 0.002   ubiquitin associated protein 1 
DHRS12                0.002   dehydrogenase/reductase (SDR family) member 12 isofo...
LRRC33                0.002   leucine rich repeat containing 33 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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